Impact of harvest by humans on mussel populations around Easter

The current macroeconomic scenario has subjected Portuguese coastal areas to greater human pressure caused by the ever-increasing shellfish harvest. Every year on Holy Friday, hundreds of people make their way to coastal areas and frantically capture hundreds of bags worth of mussels in a short amount of time. It causes not just inevitable and profound changes to the intertidal zone, but also slows down its recovery. In 2010 Cascais Municipality (CM) was made aware of this problem and in 2011 and 2012 released a general awareness campaign entitled “In Easter who pays is the mussel”. More than just providing a legal perspective, the goal was to test the impact of said campaign in Meixilhoeiro’s mussel beds. Biological data sampling in “Mexilhoeiro” was conducted over a three-year period, from 2010 to 2012. In 2010 there was no awareness campaign but sampling was done after Holy Friday. In 2011 and 2012 it was done both after and before Holy Friday. The average length and coverage percentage of individuals in rocks were recorded. The subsequent graphical analysis indicated that the average coverage percentage of mussels had been decreasing over the years. However a positive sign was recorded in after the 2012 awareness campaign, when the average length of individuals showed an increase. This could mean a reduction in harvesting during Holy Friday. Results suggest that awareness campaigns are effective measures in the immediate protection of marine resources, when supported by reinforcement in surveillance from fisheries protection authorities. For such improvements to persist, so must those efforts. Beachgoers in the summertime can have a detrimental impact on mussel bed size. Prohibiting recreational fishing will not suffice

Prediction of COVID-19 diagnosis based on openEHR artefacts

Nowadays, we are facing the worldwide pandemic caused by COVID-19. The complexity and momentum of monitoring patients infected with this virus calls for the usage of agile and scalable data structure methodologies. OpenEHR is a healthcare standard that is attracting a lot of attention in recent years due to its comprehensive and robust architecture. The importance of an open, standardized and adaptable approach to clinical data lies in extracting value to generate useful knowledge that really can help healthcare professionals make an assertive decision. This importance is even more accentuated when facing a pandemic context. Thus, in this study, a system for tracking symptoms and health conditions of suspected or confirmed SARS-CoV-2 patients from a Portuguese hospital was developed using openEHR. All data on the evolutionary status of patients in home care as well as the results of their COVID-19 test were used to train different ML algorithms, with the aim of developing a predictive model capable of identifying COVID-19 infections according to the severity of symptoms identified by patients. The CRISP-DM methodology was used to conduct this research. The results obtained were promising, with the best model achieving an accuracy of 96.25%, a precision of 99.91%, a sensitivity of 92.58%, a specificity of 99.92%, and an AUC of 0.963, using the Decision Tree algorithm and the Split Validation method. Hence, in the future, after further testing, the predictive model could be implemented in clinical decision support systems.This work is funded by "FCT-Fundacao para a Ciencia e Tecnologia" within the R &D Units Project Scope: UIDB/00319/2020. D.F. thanks the FundacAo para a Ciencia e Tecnologia (FCT), Portugal for the Grant 2021.06308.BD

A web-based information system for a regional public mental healthcare service network in Brazil

Acknowledgements We would like to thank all the participating representatives of public mental health services for their invaluable contribution to this system development and implementation and the XIII Regional Health Department of Sao Paulo state for their support. Funding: This study was funded by the ‘Conselho Nacional de Desenvolvimento Científico e Tecnológico’ (CNPq) and ‘Coordenação de Aperfeiçoamento de Pessoal de Nível Superior’ (CAPES)—Science Without Borders Programme.Peer reviewedPublisher PD

Anti-mycobacterial activity of labdane and halimane diterpenes obtained from Plectranthus ornatus Codd

Biomedical and biopharmaceutical research : jornal de investigação biomédica e biofarmacêuticaOs produtos naturais são uma fonte única de compostos-tipofpara o desenvolvimento de fármacos em química medicinal. Vários diterpenos das espécies Plectranthus foram referidos com actividade tuberculostática interessante, sendo que o P. omatus Codd. é usado como anti-infeccioso em algumas regiões do Brasil. Em trabalhos anteriores, um diterpeno de esqueleto de halimano outro labdano foram isolados a partir de P. ornatus Codd. Neste trabalho, avaliou-se preliminarmente a sua actividade micobacteriana com uma estirpe não virulenta de Mycobacterium smegmatis. A citotoxicidade dos compostos foi testada medindo a libertação de lactato desidrogenase (LDH) não sendo encontrados efeitos citotóxicos consideráveis até 25 ug/mL. Posteriormente, o método de microdiluição foi utilizado para determinar a concentração mínima inibitória (CMI) de M. smegmatis. A CMI>99% para o esqueleto de halimano foi 100 ug/mL e >100 ug/mL para o esqueleto de labdano. De acordo com o nosso conhecimento, este é o primeiro estudo usando diterpenos de esqueleto de halimano e de labdano isolados a partir de P. omatus em ensaios de citotoxicidade em macrófagos, e num ensaio preliminar sobre a sua atividade anti-micobacteriana. Estudos futuros são sugeridos na estirpe virulenta de M. tugerculosis, particularmente para os diterpenos de esqueleto de halimano.Plectranthus spp. have been reported to have interesting tuberculostatic activity and P. ornatus Codd. has been used in some regions of Brazil as an anti-infective. Previously, diterpenes with halimane and labdane skeletons were isolated in large quantities from P. ornatus Codd. We assessed the anti-mycobacterial activity of these compounds, performing a preliminar assay with the non-virulent strain Mycobacterium smegmatis. The cytotoxicity of the diterpenes with halimane and labdane skeletons was tested with the lactate dehydrogenase assay, where no considerable cytotoxic effects were found up to 25 μg.mL-1. Subsequently, the microdilution method was used to determine the minimum inhibitory concentration (MIC) against M. smegmatis. The MIC that inhibited the growth of the non-virulent mycobacteria by ≥99% was 100 μg.mL-1 for the diterpene with halimane skeleton, whereas for the diterpene with a labdane skeleton was >100 μg.mL-1. To the best of our knowledge, this is the first report on diterpenes with halimane and labdane skeletons isolated from P. ornatus in macrophages cytotoxicity, and in a preliminar assay for anti-mycobacterial activity. Further studies are suggested on M. tuberculosis, particularly for the diterpenes with halimane skeleton

Pyrimidine salvage enzymes are essential for de novo biosynthesis of Deoxypyrimidine nucleotides in Trypanosoma brucei

© 2016 Leija et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.The human pathogenic parasite Trypanosoma brucei possess both de novo and salvage routes for the biosynthesis of pyrimidine nucleotides. Consequently, they do not require salvageable pyrimidines for growth. Thymidine kinase (TK) catalyzes the formation of dTMP and dUMP and is one of several salvage enzymes that appear redundant to the de novo pathway. Surprisingly, we show through analysis of TK conditional null and RNAi cells that TK is essential for growth and for infectivity in a mouse model, and that a catalytically active enzyme is required for its function. Unlike humans, T. brucei and all other kinetoplastids lack dCMP deaminase (DCTD), which provides an alternative route to dUMP formation. Ectopic expression of human DCTD resulted in full rescue of the RNAi growth phenotype and allowed for selection of viable TK null cells. Metabolite profiling by LC-MS/MS revealed a buildup of deoxypyrimidine nucleosides in TK depleted cells. Knockout of cytidine deaminase (CDA), which converts deoxycytidine to deoxyuridine led to thymidine/deoxyuridine auxotrophy. These unexpected results suggested that T. brucei encodes an unidentified 5'-nucleotidase that converts deoxypyrimidine nucleotides to their corresponding nucleosides, leading to their dead-end buildup in TK depleted cells at the expense of dTTP pools. Bioinformatics analysis identified several potential candidate genes that could encode 5'-nucleotidase activity including an HD-domain protein that we show catalyzes dephosphorylation of deoxyribonucleotide 5'-monophosphates. We conclude that TK is essential for synthesis of thymine nucleotides regardless of whether the nucleoside precursors originate from the de novo pathway or through salvage. Reliance on TK in the absence of DCTD may be a shared vulnerability among trypanosomatids and may provide a unique opportunity to selectively target a diverse group of pathogenic single-celled eukaryotes with a single drug.This work was supported by National Institutes of Health (grants AI078962 and AI034432) to MAP (https://www.niaid.nih.gov) and (grant GM007062) to CL (https://www.nigms.nih. gov), the Welch Foundation (grant I-1257) to MAP and (grant I-1686) to JJK (http://www.welch1.org), and Fundac ̧ão para a Ciência e Tecnologia (FCT, Portugal) SFRH/BD/51286/2010 (http://www.fct.pt) to FRF.info:eu-repo/semantics/publishedVersio

Trypanosoma brucei triggers a broad immune response in the adipose tissue

Copyright: © 2021 Machado et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.Adipose tissue is one of the major reservoirs of Trypanosoma brucei parasites, the causative agent of sleeping sickness, a fatal disease in humans. In mice, the gonadal adipose tissue (AT) typically harbors 2-5 million parasites, while most solid organs show 10 to 100-fold fewer parasites. In this study, we tested whether the AT environment responds immunologically to the presence of the parasite. Transcriptome analysis of T. brucei infected adipose tissue revealed that most upregulated host genes are involved in inflammation and immune cell functions. Histochemistry and flow cytometry confirmed an increasingly higher number of infiltrated macrophages, neutrophils and CD4+ and CD8+ T lymphocytes upon infection. A large proportion of these lymphocytes effectively produce the type 1 effector cytokines, IFN-γ and TNF-α. Additionally, the adipose tissue showed accumulation of antigen-specific IgM and IgG antibodies as infection progressed. Mice lacking T and/or B cells (Rag2-/-, Jht-/-), or the signature cytokine (Ifng-/-) displayed a higher parasite load both in circulation and in the AT, demonstrating the key role of the adaptive immune system in both compartments. Interestingly, infections of C3-/- mice showed that while complement system is dispensable to control parasite load in the blood, it is necessary in the AT and other solid tissues. We conclude that T. brucei infection triggers a broad and robust immune response in the AT, which requires the complement system to locally reduce parasite burden.This work was supported by the European Research Council (FatTryp, ref. 771714) awarded to LMF, by Fundação para a Ciência e Tecnologia (CEECIND/03322/2018) awarded to LMF, (PTDC/MED-IMU/30948/2017 and CEECIND/00697/2018) awarded to KS, (PD/BD/128286/2017) awarded to HM, (SFRH/BPD/89833/2012) awarded to ST, (IMM/BI/83-2017 through PTDC/BIM-MET/4471/2014) awarded to TB-R and by the National Institutes of Health (NIGMS K99GM132557) awarded to FR-F. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.info:eu-repo/semantics/publishedVersio

Social support in people with chronic respiratory diseases: an exploratory study

Objectives: Social support influences health status and manage-ment of people with chronic respiratory diseases (CRDs), but it is largely unexplored. Thus, the aim of this study was to explore the quantity, quality and network composition of social support in peo-ple with CRDs.Methods: An exploratory cross-sectional study was conducted in people with CRDs. Quantity (number of people), quality (level of satisfaction) and network composition (who provides support) of social support were assessed with the 6-item short form Social Su-pport Questionnaire (SSQ6). For each item, participants were asked to provide two answers: i) to list all people or institutions who fit the description of the question (range: 0 to 9 people; quantity and network composition); and ii) to indicate how satisfied they were with the support these people or institutions provided (range: 1 very dissatisfied to 6 very satisfied; quality). Total score for quantity and quality was computed using the mean of the scores from the 6 items. Descriptive statistics was used, and values were presented as median, minimum and maximum or frequencies.Results: Forty-eight people with CRDs (chronic obstructive pulmo-nary disease [COPD] n = 39, asthma n = 4, interstitial lung disease [ILD] n = 4 and lung cancer n = 1; 70 [51-84] years old, 32 [66.7%] male) were included. Participants had a median quantity and quality of social support of 1.66 [0.67-7.67] people and 6 [3.5-6] points, respectively. Their support network was mainly composed by close relatives (i.e., spouse and children) in all items of SSQ6 (Table).Conclusions: People with CRDs seem to have low quantity of social support but perceive it as high quality. The network composition of social support seems to lack support from the community (e.g., neighbours and/or institutions) in this population.publishe