Fast, sensitive and specific detection of Thailand orthohantavirus and its variants using one-step real-time reverse-transcription polymerase chain reaction assay

Funding: This study was supported by the Programme Transversal de Recherche (PTR 505) funded by the Institut Pasteur International Network. V.R. was also supported though Girard’s fellowship undergraduate program from the Institut Pasteur de Madagascar and traineeship grants Calmette and Yersin program from the Institut Pasteur International Network. Acknowledgements: We would like to express our gratitude to the staff of the Plague Central Laboratory Unit, Institut Pasteur de Madagascar: Minoarisoa Rajerison, Fehivola Mandanirina Andriamiarimanana, and Soanandrasana Rahelinirina for conducting the field work and for providing samplesPeer reviewedPublisher PD

IMPACT OF COVID-19 ON PEOPLE LIVING WITH HIV IN MADAGASCAR: A SARS-COV2 SERO-PREVALENCE SURVEY

Background:  In Madagascar, no study has reported the impact of COVID-19 on people living with HIV (PLHIV). The present work aimed to analyze the seroprevalence of SARS-CoV-2 in Malagasy PLHIV before and during the three waves of COVID-19 pandemic.This is a retrospective study. Materials and Methods: We conducted a retrospective serological survey in PLHIV followed up for HIV viral load (VL) monitoring at the Centre d’Infectiologie Charles Mérieux Madagascar (CICM) between June 2019 and April 2022. The presence of IgM and/or IgG antibodies against SARS-CoV-2 nucleoprotein was detected using a rapid diagnostic test (COVID-PRESTO®). Results: A seroprevalence of 2.5% was found in the 877 patients tested before March 2020, compared to 25.4% (512/2,011) between March 2020 and April 2022. This seroprevalence was 21.7%, 22.3% and 60.1% after the first, second and third waves of COVID-19, respectively. We observed a marginally significant difference (p = 0.043) in SARS-CoV-2 seroprevalence between patients on highly active antiretroviral therapy (HAART) (27.5%) and those who were not (23.7%). No statistically significant difference was observed between PLHIV with undetectable HIV VL (27.4%) and the different detectable VL categories (p>0.05). Conclusions: Our data show the presence of antibodies to SARS-CoV-2 among PLHIV as early as December 2019 in Madagascar. At least 25.4% (512/2,011) of Malagasy PLHIV have been in contact with SARS-CoV-2 since March 2020. There is no significant relation between HIV-1 VL and SARS-CoV-2 seroprevalence. Additional studies with more robust assays in the general population are needed for a detailed knowledge of SARS-CoV-2 impact in Madagascar

Geographical distribution and relative risk of Anjozorobe virus (Thailand orthohantavirus) infection in black rats (Rattus rattus) in Madagascar

Acknowledgements We thank those who facilitated the survey: householders, heads of fokontany, local administration and health authorities from Ministry of Health. We would like to express our gratitude to the staff of the Plague Central Laboratory Unit, Institut Pasteur de Madagascar: Dr. Minoarisoa Rajerison who facilitated this study; Corinne Rahaingosoamamitiana and Soanandrasana Rahelinirina for helping to conduct and organize the field work. We would also like to thank Dr. Fanjasoa Rakotomanana and Dr. Lalaina Arivony Nomenjanahary assistance in the field trips and technical and field support. Funding This work was supported by the Institut Pasteur de Madagascar (Internal Project through ZORA: Zoonoses, Rodent and Arboviruses) and Wellcome Trust Fellowships to ST (#081705, #095171). VR was also supported though Girard’s fellowship undergraduate program from the Institut Pasteur de Madagascar. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.Peer reviewedPublisher PD

Le principe toxique du bambou consommé par Hapalemur aureus n’est pas neutralisé par la terre ingérée

The toxicity of the bamboo shoots of Cephalostachium viguieri, eaten by Hapalemur aureus, has been tested before and after mixing the crushed plant material with the soil which is also consumed by the animal. Although in most instances, geophagy allows primates to detoxify plant secondary compounds such as tannins or glycoalkaloids, in the present case, the adsorption by the soil was not efficient. Other physiological or behavioral responses are still to be found to explain how the Golden Hapalemur copes with the bamboo toxicity.Jeannoda Vololoniaina, Rakotonirina Ony, Randrianarivo Hanitra, Rakoto Danielle Doll Aurore, Wright Patricia C., Hladik C.M. Le principe toxique du bambou consommé par Hapalemur aureus n’est pas neutralisé par la terre ingérée. In: Revue d'Écologie (La Terre et La Vie), tome 58, n°1, 2003. pp. 151-153

Antimicrobial activity of extracts from Crotalaria bernieri Baill. (Fabaceae)

International audienceThis work was designed to study the antimicrobial activity of Crotalaria bernieri Baill. (Fabaceae). Extracts from leaf, root, pod and seed using hexane, ethyl acetate and methanol were tested in vitro for their activity against 17 bacteria, 5 fungi (3 yeasts and 2 molds) using disc diffusion and micro dilution methods. At the concentration of 1 mg/disc, all the extracts exhibited antimicrobial activity depending on the plant part and the extraction method used. The most sensitive germs were Salmonella enteridis, Streptococcus pyogenes and Candida guilliermondii with inhibition zone diameter (IZD) of 11 mm, 15 mm and 13 mm respectively. Most of extracts showed, broad activity spectrum varying from one extract to another. Minimum inhibitory concentration (MIC), minimum bactericidal concentration (MBC) and minimum fungicidal concentration (MFC) of all extracts were recorded. Ten extracts displayed an excellent effect (MIC 1000 µg/ml). Leaf methanol extracts were the most efficient and Gram positive bacteria the most sensitive. All extracts had bactericidal (MBC/MIC ≤ 4) or fungicidal action (MFC/MIC ≤ 4) in certain microorganisms and bacteriostatic (MBC/MIC > 4) or fungistatic action (MFC/MIC > 4) in others. Antimicrobial activity might be due to tannins, polyphenols, steroids, triterpenes and flavonoids that were present in most of the plant organs, but alkaloids in leaf and pod and saponosides in root might also be involved. C. bernieri with the effectiveness of all its parts, the variety of its secondary metabolites, the great number of sensitive pathogen microorganisms and its ubiquity make this plant species an interesting source of antimicrobial agents

Pyrrolizidine-Derived Alkaloids: Highly Toxic Components in the Seeds of Crotalaria cleomifolia Used in Popular Beverages in Madagascar

Seeds of Crotalaria cleomifolia (Fabaceae) are consumed in Madagascar in preparation of popular beverages. The investigation of extracts from the seeds of this species revealed the presence of high amounts of alkaloids from which two pyrrolizidine-derived alkaloids were isolated. One of them was fully characterized by spectroscopic and spectrometric methods, which was found to be usaramine. Owing to the high toxicity of these alkaloids, issuing a strong warning among populations consuming the seeds of Crotalaria cleomifolia must be considered

High Seroprevalence of IgG Antibodies to Multiple Arboviruses in People Living with HIV (PLWHIV) in Madagascar

To estimate the prevalence of IgG antibodies against six arboviruses in people living with HIV-1 (PLWHIV) in Madagascar, we tested samples collected between January 2018 and June 2021. We used a Luminex-based serological assay to detect IgG antibodies against antigens from Dengue virus serotypes 1–4 (DENV1–4), Zika virus (ZIKV), West Nile virus (WNV), Usutu virus (USUV), Chikungunya virus (CHIKV), and O’nyong nyong virus (ONNV). Of the 1036 samples tested, IgG antibody prevalence was highest for ONNV (28.4%), CHIKV (26.7%), WNV-NS1 (27.1%), DENV1 (12.4%), USUV (9.9%), and DENV3 (8.9%). ZIKV (4.9%), DENV2 (4.6%), WNV-D3 (5.1%), and DENV4 (1.4%) were lower. These rates varied by province of origin, with the highest rates observed in Toamasina, on the eastern coast (50.5% and 56.8%, for CHIKV and ONNV, respectively). The seroprevalence increased with age for DENV1 and 3 (p = 0.006 and 0.038, respectively) and WNV DIII (p = 0.041). The prevalence of IgG antibodies against any given arborvirus varied over the year and significantly correlated with rainfalls in the different areas (r = 0.61, p = 0.036). Finally, we found a significant correlation between the seroprevalence of antibodies against CHIKV and ONNV and the HIV-1 RNA plasma viral load. Thus, PLWHIV in Madagascar are highly exposed to various arboviruses. Further studies are needed to explain some of our findings

Chemical composition of the pods of <i>Albizia polyphylla</i>

<p>In this study, we report for the first time the presence of alkaloids belonging to <i>β</i>-carboline type in the pods of the endemic <i>Albizia polyphylla</i> from Madagascar. Three major alkaloids were isolated and structurally identified as: 1-methyl-<i>β</i>-carboline, (+)-(<i>R</i>)-1-methyl-1,2,3,4-tetrahydro-<i>β</i>-carboline and (–)-(<i>S</i>)-1,2-dimethyl-1,2,3,4-tetrahydro-<i>β</i>-carboline.</p