Observations of apparent superslow wave propagation in solar prominences

Phase mixing of standing continuum Alfv\'en waves and/or continuum slow waves in atmospheric magnetic structures such as coronal arcades can create the apparent effect of a wave propagating across the magnetic field. We observe a prominence with SDO/AIA on 2015 March 15 and find the presence of oscillatory motion. We aim to demonstrate that interpreting this motion as a magneto hydrodynamic (MHD) wave is faulty. We also connect the decrease of the apparent velocity over time with the phase mixing process, which depends on the curvature of the magnetic field lines. By measuring the displacement of the prominence at different heights to calculate the apparent velocity, we show that the propagation slows down over time, in accordance with the theoretical work of Kaneko et al. We also show that this propagation speed drops below what is to be expected for even slow MHD waves for those circumstances. We use a modified Kippenhahn-Schl\"uter prominence model to calculate the curvature of the magnetic field and fit our observations accordingly. Measuring three of the apparent waves, we get apparent velocities of 14, 8, and 4 km/s. Fitting a simple model for the magnetic field configuration, we obtain that the filament is located 103 Mm below the magnetic centre. We also obtain that the scale of the magnetic field strength in the vertical direction plays no role in the concept of apparent superslow waves and that the moment of excitation of the waves happened roughly one oscillation period before the end of the eruption that excited the oscillation. Some of the observed phase velocities are lower than expected for slow modes for the circumstances, showing that they rather fit with the concept of apparent superslow propagation. A fit with our magnetic field model allows for inferring the magnetic geometry of the prominence.Comment: 10 pages, 6 figures, 1 of which consists of 3 panel

Borneo : a quantitative analysis of botanical richness, endemicity and floristic regions based on herbarium records

Based on the digitized herbarium records housed at the National Herbarium of the Netherlands I developed high spatial resolution patterns of Borneo's botanical richness, endemicity, and the floristic regions. The patterns are derived from species distribution models which predict a species occurrence based on the identified relationships between species recorded presences and the ecological circumstances at those localities. A new statistical method was developed to test the species distribution models. Several areas of high richness and endemicity were added to the list of previous known ones. Furthermore, the lowland rain forest of Borneo, previously recognized as one floristic region, in fact harbours at least four (and possibly six) different floristic regions.UBL - phd migration 201

Elemental Composition and Sources of Atmospheric Particulate Matter in Dar es Salaam, Tanzania

An intensive aerosol field campaign was carried out from 16 August to 16 September 2005 (dry season) at a kerbside in Dar es Salaam, Tanzania. A Gent PM10 stacked filter unit sampler with coarse and fine Nuclepore polycarbonate filters, providing fine (0.4 μm) and coarse (8 μm) size fractions, was deployed. A total of 64 parallel collections were made. All samples were analysed for the PM mass by weighing. A further analysis was performed for 25 elements by particle-induced x-ray emission spectrometry. The PM10 mass, as derived from the stacked filter unit samples, was, on average, 58 μg/m3. The concentrations of the heavy metals were lower than those for the elements of crustal origin. Nevertheless, some typical anthropogenic metals, such as Zn and Pb, exhibited much higher median PM10 levels, suggesting strong local sources for these elements in Dar es Salaam. The results also showed very strong day/night differences for the crustal elements (Al, Si, Ca, Ti and Fe). Most elements exhibit strong correlations in the coarse size fraction and somewhat weaker ones in the fine size fraction suggesting that they may originate predominantly from the same source. Principal component analysis with VARIMAX rotation was applied to the data set. Five and four components were identified for the fine and coarse fractions and explained 86.5% and 90.8% of the variance in the data set respectively.Keywords: PIXE; Atmospheric Aerosols; Elements; Size Fractions; PCA; Kerbsid

Spatial patterns of carbon, biodiversity, deforestation threat, and REDD+ projects in Indonesia

There are concerns that Reduced Emissions from Deforestation and forest Degradation (REDD+) may fail to deliver potential biodiversity cobenefits if it is focused on high carbon areas. We explored the spatial overlaps between carbon stocks, biodiversity, projected deforestation threats, and the location of REDD+ projects in Indonesia, a tropical country at the forefront of REDD+ development. For biodiversity, we assembled data on the distribution of terrestrial vertebrates (ranges of amphibians, mammals, birds, reptiles) and plants (species distribution models for 8 families). We then investigated congruence between different measures of biodiversity richness and carbon stocks at the national and subnational scales. Finally, we mapped active REDD+ projects and investigated the carbon density and potential biodiversity richness and modeled deforestation pressures within these forests relative to protected areas and unprotected forests. There was little internal overlap among the different hotspots (richest 10% of cells) of species richness. There was also no consistent spatial congruence between carbon stocks and the biodiversity measures: a weak negative correlation at the national scale masked highly variable and nonlinear relationships island by island. Current REDD+ projects were preferentially located in areas with higher total species richness and threatened species richness but lower carbon densities than protected areas and unprotected forests. Although a quarter of the total area of these REDD+ projects is under relatively high deforestation pressure, the majority of the REDD+ area is not. In Indonesia at least, first-generation REDD+ projects are located where they are likely to deliver biodiversity benefits. However, if REDD+ is to deliver additional gains for climate and biodiversity, projects will need to focus on forests with the highest threat to deforestation, which will have cost implications for future REDD+ implementation

Imaging dielectric relaxation in nanostructured polymers by frequency modulation electrostatic force microscopy

We have developed a method for imaging the temperature-frequency dependence of the dynamics of nanostructured polymer films with spatial resolution. This method provides images with dielectric compositional contrast well decoupled from topography. Using frequency-modulation electrostatic-force-microscopy, we probe the local frequency-dependent (0.1–100 Hz) dielectric response through measurement of the amplitude and phase of the force gradient in response to an oscillating applied electric field. When the phase is imaged at fixed frequency, it reveals the spatial variation in dielectric losses, i.e., the spatial variation in molecular/dipolar dynamics, with 40 nm lateral resolution. This is demonstrated by using as a model system; a phase separated polystyrene/polyvinyl-acetate (PVAc) blend. We show that nanoscale dynamic domains of PVAc are clearly identifiable in phase images as those which light-up in a band of temperature, reflecting the variations in the molecular/dipolar dynamics approaching the glass transition temperature of PVAc

AquaCrop-OS: An open source version of FAO's crop water productivity model

AbstractCrop simulation models are valuable tools for quantifying crop yield response to water, and for devising strategies to improve agricultural water management. However, applicability of the majority of crop models is limited greatly by a failure to provide open-access to model source code. In this study, we present an open-source version of the FAO AquaCrop model, which simulates efficiently water-limited crop production across diverse environmental and agronomic conditions. Our model, called AquaCrop-OpenSource (AquaCrop-OS), can be run in multiple programming languages and operating systems. Support for parallel execution reduces significantly simulation times when applying the model in large geospatial frameworks, for long-run policy analysis, or for uncertainty assessment. Furthermore, AquaCrop-OS is compliant with the Open Modelling Interface standard facilitating linkage to other disciplinary models, for example to guide integrated water resources planning

Identifying genomic and metabolic features that can underlie early successional and opportunistic lifestyles of human gut symbionts

We lack a deep understanding of genetic and metabolic attributes specializing in microbial consortia for initial and subsequent waves of colonization of our body habitats. Here we show that phylogenetically interspersed bacteria in Clostridium cluster XIVa, an abundant group of bacteria in the adult human gut also known as the Clostridium coccoides or Eubacterium rectale group, contains species that have evolved distribution patterns consistent with either early successional or stable gut communities. The species that specialize to the infant gut are more likely to associate with systemic infections and can reach high abundances in individuals with Inflammatory Bowel Disease (IBD), indicating that a subset of the microbiota that have adapted to pioneer/opportunistic lifestyles may do well in both early development and with disease. We identified genes likely selected during adaptation to pioneer/opportunistic lifestyles as those for which early succession association and not phylogenetic relationships explain genomic abundance. These genes reveal potential mechanisms by which opportunistic gut bacteria tolerate osmotic and oxidative stress and potentially important aspects of their metabolism. These genes may not only be biomarkers of properties associated with adaptation to early succession and disturbance, but also leads for developing therapies aimed at promoting reestablishment of stable gut communities following physiologic or pathologic disturbances