Prolonged exposure does not increase soil microbial community compositional response to warming along geothermal gradients

Global change is expected to affect soil microbial communities through their responsiveness to temperature. It has been proposed that prolonged exposure to elevated temperatures may lead to progressively larger effects on soil microbial community composition. However, due to the relatively short-term nature of most warming experiments, this idea has been challenging to evaluate. The present study took the advantage of natural geothermal gradients (from +1°C to +19°C above ambient) in two subarctic grasslands to test the hypothesis that long-term exposure (>50 years) intensifies the effect of warming on microbial community composition compared to short-term exposure (5–7 years). Community profiles from amplicon sequencing of bacterial and fungal rRNA genes did not support this hypothesis: significant changes relative to ambient were observed only starting from the warming intensity of +9°C in the long term and +7°C/+3°C in the short term, for bacteria and fungi, respectively. Our results suggest that microbial communities in high-latitude grasslands will not undergo lasting shifts in community composition under the warming predicted for the coming 100 years (+2.2°C to +8.3°C).This work was supported by Research Foundation–Flanders (FWO) [1293114N to JTW, 12B0716N to SV, 11G1615N to NIWL], Icelandic Research Council [163272-051 to BDS], Climate Change Manipulation Experiments in Terrestrial Ecosystems (ClimMani) COST Action [ES1308], the European Research Council grant ERC-SyG-610028 IMBALANCE-P and the University of Antwerp: University Research Fund (BOF).Peer Reviewe

Global maps of soil temperature

Research in global change ecology relies heavily on global climatic grids derived from estimates of air temperature in open areas at around 2 m above the ground. These climatic grids do not reflect conditions below vegetation canopies and near the ground surface, where critical ecosystem functions occur and most terrestrial species reside. Here, we provide global maps of soil temperature and bioclimatic variables at a 1-km2 resolution for 0–5 and 5–15 cm soil depth. These maps were created by calculating the difference (i.e. offset) between in situ soil temperature measurements, based on time series from over 1200 1-km2 pixels (summarized from 8519 unique temperature sensors) across all the world\u27s major terrestrial biomes, and coarse-grained air temperature estimates from ERA5-Land (an atmospheric reanalysis by the European Centre for Medium-Range Weather Forecasts). We show that mean annual soil temperature differs markedly from the corresponding gridded air temperature, by up to 10°C (mean = 3.0 ± 2.1°C), with substantial variation across biomes and seasons. Over the year, soils in cold and/or dry biomes are substantially warmer (+3.6 ± 2.3°C) than gridded air temperature, whereas soils in warm and humid environments are on average slightly cooler (−0.7 ± 2.3°C). The observed substantial and biome-specific offsets emphasize that the projected impacts of climate and climate change on near-surface biodiversity and ecosystem functioning are inaccurately assessed when air rather than soil temperature is used, especially in cold environments. The global soil-related bioclimatic variables provided here are an important step forward for any application in ecology and related disciplines. Nevertheless, we highlight the need to fill remaining geographic gaps by collecting more in situ measurements of microclimate conditions to further enhance the spatiotemporal resolution of global soil temperature products for ecological applications

Lipid biomarker temperature proxy responds to abrupt shift in the bacterial community composition in geothermally heated soils

Specific soil bacterial membrane lipids, branched glycerol dialkyl glycerol tetraethers (brGDGTs), are used as an empirical proxy for past continental temperatures. Their response to temperature change is assumed to be linear, caused by physiological plasticity of their, still unknown, source organisms. A well-studied set of geothermally warmed soils (Iceland) shows that the brGDGT fingerprint only changes when the soil mean annual temperature is warmer than 14 °C. This sudden change in brGDGT distribution coincides with an abrupt shift in the bacterial community composition in the same soils. Determining which bacterial OTUs are indicative for each soil cluster shows that Acidobacteria are possible brGDGT producers, together with representatives from the Actinobacteria, Chloroflexi, Gemmationadetes and Proteobacteria. Projecting the lipid fingerprint of the cold and warm bacterial communities onto the global soil calibration dataset creates two distinct soil clusters, in which brGDGTs respond differently to temperature and, especially, soil pH. We show that, on a local scale, a community effect rather than physiological plasticity can be the primary driver of the brGDGT-based paleothermometer along large temperature gradients. This threshold response needs to be taken into account when interpreting brGDGT-based paleo-records

Lipid biomarker temperature proxy responds to abrupt shift in the bacterial community composition in geothermally heated soils

Specific soil bacterial membrane lipids, branched glycerol dialkyl glycerol tetraethers (brGDGTs), are used as an empirical proxy for past continental temperatures. Their response to temperature change is assumed to be linear, caused by physiological plasticity of their, still unknown, source organisms. A well-studied set of geothermally warmed soils (Iceland) shows that the brGDGT fingerprint only changes when the soil mean annual temperature is warmer than 14 °C. This sudden change in brGDGT distribution coincides with an abrupt shift in the bacterial community composition in the same soils. Determining which bacterial OTUs are indicative for each soil cluster shows that Acidobacteria are possible brGDGT producers, together with representatives from the Actinobacteria, Chloroflexi, Gemmationadetes and Proteobacteria. Projecting the lipid fingerprint of the cold and warm bacterial communities onto the global soil calibration dataset creates two distinct soil clusters, in which brGDGTs respond differently to temperature and, especially, soil pH. We show that, on a local scale, a community effect rather than physiological plasticity can be the primary driver of the brGDGT-based paleothermometer along large temperature gradients. This threshold response needs to be taken into account when interpreting brGDGT-based paleo-records

Lipid biomarker temperature proxy responds to abrupt shift in the bacterial community composition in geothermally heated soils

Specific soil bacterial membrane lipids, branched glycerol dialkyl glycerol tetraethers (brGDGTs), are used as an empirical proxy for past continental temperatures. Their response to temperature change is assumed to be linear, caused by physiological plasticity of their, still unknown, source organisms. A well-studied set of geothermally warmed soils (Iceland) shows that the brGDGT fingerprint only changes when the soil mean annual temperature is warmer than 14 °C. This sudden change in brGDGT distribution coincides with an abrupt shift in the bacterial community composition in the same soils. Determining which bacterial OTUs are indicative for each soil cluster shows that Acidobacteria are possible brGDGT producers, together with representatives from the Actinobacteria, Chloroflexi, Gemmationadetes and Proteobacteria. Projecting the lipid fingerprint of the cold and warm bacterial communities onto the global soil calibration dataset creates two distinct soil clusters, in which brGDGTs respond differently to temperature and, especially, soil pH. We show that, on a local scale, a community effect rather than physiological plasticity can be the primary driver of the brGDGT-based paleothermometer along large temperature gradients. This threshold response needs to be taken into account when interpreting brGDGT-based paleo-records

Lipid biomarker temperature proxy responds to abrupt shift in the bacterial community composition in geothermally heated soils

Specific soil bacterial membrane lipids, branched glycerol dialkyl glycerol tetraethers (brGDGTs), are used as an empirical proxy for past continental temperatures. Their response to temperature change is assumed to be linear, caused by physiological plasticity of their, still unknown, source organisms. A well-studied set of geothermally warmed soils (Iceland) shows that the brGDGT fingerprint only changes when the soil mean annual temperature is warmer than 14 °C. This sudden change in brGDGT distribution coincides with an abrupt shift in the bacterial community composition in the same soils. Determining which bacterial OTUs are indicative for each soil cluster shows that Acidobacteria are possible brGDGT producers, together with representatives from the Actinobacteria, Chloroflexi, Gemmationadetes and Proteobacteria. Projecting the lipid fingerprint of the cold and warm bacterial communities onto the global soil calibration dataset creates two distinct soil clusters, in which brGDGTs respond differently to temperature and, especially, soil pH. We show that, on a local scale, a community effect rather than physiological plasticity can be the primary driver of the brGDGT-based paleothermometer along large temperature gradients. This threshold response needs to be taken into account when interpreting brGDGT-based paleo-records

A systemic overreaction to years versus decades of warming in a subarctic grassland ecosystem.

Temperature governs most biotic processes, yet we know little about how warming affects whole ecosystems. Here we examined the responses of 128 components of a subarctic grassland to either 5-8 or >50 years of soil warming. Warming of >50 years drove the ecosystem to a new steady state possessing a distinct biotic composition and reduced species richness, biomass and soil organic matter. However, the warmed state was preceded by an overreaction to warming, which was related to organism physiology and was evident after 5-8 years. Ignoring this overreaction yielded errors of >100% for 83 variables when predicting their responses to a realistic warming scenario of 1 °C over 50 years, although some, including soil carbon content, remained stable after 5-8 years. This study challenges long-term ecosystem predictions made from short-term observations, and provides a framework for characterization of ecosystem responses to sustained climate change

Soil properties as key predictors of global grassland production: Have we overlooked micronutrients?

Fertilisation experiments have demonstrated that nutrient availability is a key determinant of biomass production and carbon sequestration in grasslands. However, the influence of nutrients in explaining spatial variation in grassland biomass production has rarely been assessed. Using a global dataset comprising 72 sites on six continents, we investigated which of 16 soil factors that shape nutrient availability associate most strongly with variation in grassland aboveground biomass. Climate and N deposition were also considered. Based on theory-driven structural equation modelling, we found that soil micronutrients (particularly Zn and Fe) were important predictors of biomass and, together with soil physicochemical properties and C:N, they explained more unique variation (32%) than climate and N deposition (24%). However, the association between micronutrients and biomass was absent in grasslands limited by NP. These results highlight soil properties as key predictors of global grassland biomass production and point to serial co-limitation by NP and micronutrients.This article is published as Radujković, Dajana, Erik Verbruggen, Eric W. Seabloom, Michael Bahn, Lori A. Biederman, Elizabeth T. Borer, Elizabeth H. Boughton et al. "Soil properties as key predictors of global grassland production: Have we overlooked micronutrients?." Ecology Letters 24 (2021): 2713-2725. doi:10.1111/ele.13894. Works produced by employees of the U.S. Government as part of their official duties are not copyrighted within the U.S. The content of this document is not copyrighted

Soil properties as key predictors of global grassland production:Have we overlooked micronutrients?

Fertilisation experiments have demonstrated that nutrient availability is a key determinant of biomass production and carbon sequestration in grasslands. However, the influence of nutrients in explaining spatial variation in grassland biomass production has rarely been assessed. Using a global dataset comprising 72 sites on six continents, we investigated which of 16 soil factors that shape nutrient availability associate most strongly with variation in grassland aboveground biomass. Climate and N deposition were also considered. Based on theory-driven structural equation modelling, we found that soil micronutrients (particularly Zn and Fe) were important predictors of biomass and, together with soil physicochemical properties and C:N, they explained more unique variation (32%) than climate and N deposition (24%). However, the association between micronutrients and biomass was absent in grasslands limited by NP. These results highlight soil properties as key predictors of global grassland biomass production and point to serial co-limitation by NP and micronutrients