Two-Dimensional Gel Electrophoresis Image Registration Using Block-Matching Techniques and Deformation Models

[Abstract] Block-matching techniques have been widely used in the task of estimating displacement in medical images, and they represent the best approach in scenes with deformable structures such as tissues, fluids, and gels. In this article, a new iterative block-matching technique—based on successive deformation, search, fitting, filtering, and interpolation stages—is proposed to measure elastic displacements in two-dimensional polyacrylamide gel electrophoresis (2D–PAGE) images. The proposed technique uses different deformation models in the task of correlating proteins in real 2D electrophoresis gel images, obtaining an accuracy of 96.6% and improving the results obtained with other techniques. This technique represents a general solution, being easy to adapt to different 2D deformable cases and providing an experimental reference for block-matching algorithms.Galicia. Consellería de Economía e Industria; 10MDS014CTGalicia. Consellería de Economía e Industria; 10SIN105004PRInstituto de Salud Carlos III; PI13/0028

Oxytetracycline recovery from aqueous media using computationally designed molecularly imprinted polymers

Polymers for recovery/removal of the antimicrobial agent oxytetracycline (OTC) from aqueous media were developed with use of computational design and molecular imprinting. 2-Hydroxyethyl methacrylate, 2-acrylamide-2-methylpropane sulfonic acid (AMPS), and mixtures of the two were chosen according to their predicted affinity for OTC and evaluated as functional monomers in molecularly imprinted polymers and nonimprinted polymers. Two levels of AMPS were tested. After bulk polymerization, the polymers were crushed into particles (200–1000 μm). Pressurized liquid extraction was implemented for template removal with a low amount of methanol (less than 20 mL in each extraction) and a few extractions (12–18 for each polymer) in a short period (20 min per extraction). Particle size distribution, microporous structure, and capacity to rebind OTC from aqueous media were evaluated. Adsorption isotherms obtained from OTC solutions (30–110 mg L-1) revealed that the polymers prepared with AMPS had the highest affinity for OTC. The uptake capacity depended on the ionic strength as follows: purified water > saline solution (0.9 % NaCl) > seawater (3.5 % NaCl). Polymer particles containing AMPS as a functional monomer showed a remarkable ability to clean water contaminated with OTC. The usefulness of the stationary phase developed for molecularly imprinted solid-phase extraction was also demonstrated

On the processing time for detection of Skype traffic

Personal use of this material is permitted. Permission from IEEE must be obtained for all other uses, in any current or future media, including reprinting/republishing this material for advertising or promotional purposes, creating new collective works, for resale or redistribution to servers or lists, or reuse of any copyrighted component of this work in other works. [P. M. Santiago del Río. J. Ramos, J. L. García-Dorado, J. Aracil, A. Cuadra-Sánchez, and M. Cutanda-Rodríguez, "On the processing time for detection of Skype traffic", in 7th International Wireless Communications and Mobile Computing Conference, IWCMC 2011, p. 1784 - 1788The last few years have witnessed VoIP applications gaining a tremendous popularity and Skype, in particular, is leading this continuous expansion. Unfortunately, Skype follows a closed source and proprietary design, and typically uses encryption mechanisms, making it very difficult to identify its presence from a traffic aggregate. Several algorithms and approaches have been proposed to perform such task with promising results in terms of accuracy. However, such approaches typically require significant computation resources and it is unlikely that they can be deployed in nowadays high-speed networks. In this light, this paper focuses on cutting the processing cost of algorithms to detect Skype traffic. We have conveniently tuned a previous well-validated algorithm and we have assessed its performance. To this end, we have used real traces from public repositories, from a Spanish 3G operator, and synthetic traces. Our results show that a single process can detect Skype traffic at 1 Gbps rates reading replayed real traces directly from a NIC. Even more, 3.7 Gbps are achieved reading from traces previously allocated in memory using a single process and 45 Gbps using 16 concurrent processes. This fact paves the way for 10 Gbps processing in commodity hardware

Experiencias en sensibilización de los sectores forestal y foresto industrial de Córdoba

Ponencia presentada en el 4° Congreso Forestal Argentino Latinoamericano: “Gestión forestal sostenible, futuro posible”. Misiones, Argentina, 23 al 28 de septiembre de 2013.Este trabajo aborda un estudio de caso sobre estrategias de sensibilización destinadas a los sectores forestal y foresto industrial de la provincia de Córdoba, Argentina. Las mismas se iniciaron en la década del noventa con una columna forestal en un diario de circulación masiva. Continuaron en búsqueda de nuevos horizontes y un feed-back más cercano a los actores forestales y foresto industriales, a través del desarrollo de jornadas, cursos, charlas, comisiones de trabajo, publicaciones, implementación de blogs, aula virtual y uso de red social facebook. Las acciones iniciaron en el año 1998, con los primeros pasos orientados a la implementación de una mejora, fluidez en la circulación de la información e iniciativas para consolidar un proceso de sensibilización sobre la importancia de la sustentabilidad y la competitividad en sistemas forestales-foresto industriales. Para su análisis se adoptó una metodología que permitió captar tanto el impacto de temáticas consideradas prioritarias como de las estrategias abordadas para lograr mayor fluidez en procesos de comunicación con miras a sensibilizar y consolidar pautas para el logro de una mejora de la competitividad de PyMES forestales y foresto industriales, así como de una gestión forestal sostenible. Las conclusiones destacan: i) la importancia de un mayor dinamismo, compromiso y participación ciudadana para consolidar consenso, concepciones, principios que propicien una mayor sustentabilidad y competitividad de los citados sectores ii) la necesidad de sensibilizar para promover un cambio tendiente a mejorar la cadena productiva forestal, su competitividad y sustentabilidad.This paper addresses a case study on strategies for raising awareness onforestry and forest industry problems in the province of Cordoba, Argentina.They began in the nineties with a forest in a newspaper column mass circulation. They went in search of new horizons and feedback nearest about forestry and , forest industrystakeholders, by means ofdevelopment seminars, courses, lectures, working committees, publications, implementing blogs, virtual classroom and using social network facebook .The actionsinitiated in 1998, with the first steps aimed at the implementation of actions to improvethe information flow and initiatives to consolidate a process of awareness of the importance of forest systemssustainability and competitiveness offorest industry.For the analysis, a methodology was adopted that allowed capture both the impact of issues prioritized and addressed strategies to achieve greater fluency in communication processes with a view to raise awareness and consolidate guidelines for achieving improved competitiveness of forestry SMEs and forest industryand sustainable forest management.The conclusions are: i) the importance of greater dynamism, commitment and participation to build consensus, concepts, principles that promote greater sustainability and competitiveness of these sectors ii) the need to raise awareness to promote a change aimed at improving the chain forest production, competitiveness and sustainability.Fil: Dorado, Mónica Liliana. Universidad Nacional de Córdoba. Facultad de Ciencias Agropecuarias; Argentina.Fil: Lubrano, Pedro. Universidad Nacional de Córdoba. Facultad de Ciencias Agropecuarias; Argentina.Fil: Siwinsky, Susana. Universidad Nacional de Córdoba. Facultad de Ciencias Agropecuarias; Argentina.Fil: Rodríguez, M. Universidad Nacional de Córdoba. Facultad de Ciencias Agropecuarias; Argentina.Fil: Mandrile, R. Universidad Nacional de Córdoba. Facultad de Ciencias Agropecuarias; Argentina

Integration of 5G experimentation infrastructures into a multi-site NFV ecosystem

Network Function Virtualization (NFV) has been regarded as one of the key enablers for the 5th Generation of mobile networks, or 5G. This paradigm allows to reduce the dependence on specialized hardware to deploy telecommunications and vertical services. To this purpose, it relies on virtualization techniques to softwarize network functions, simplifying their development and reducing deployment time and costs. In this context, Universidad Carlos III de Madrid, Telefónica, and IMDEA Networks Institute have developed an NFV ecosystem inside 5TONIC, an open network innovation center focused on 5G technologies, enabling the creation of complex, close to reality experimentation scenarios across a distributed set of NFV infrastructures, which can be made available by stakeholders at different geographic locations. This article presents the protocol that has been defined to incorporate new remote NFV sites into the multi-site NFV ecosystem based on 5TONIC, describing the requirements for both the existing and the newly incorporated infrastructures, their connectivity through an overlay network architecture, and the steps necessary for the inclusion of new sites. The protocol is exemplified through the incorporation of an external site to the 5TONIC NFV ecosystem. Afterwards, the protocol details the verification steps required to validate a successful site integration. These include the deployment of a multi-site vertical service using a remote NFV infrastructure with Small Unmanned Aerial Vehicles (SUAVs). This serves to showcase the potential of the protocol to enable distributed experimentation scenarios.This work was partially supported by the European H2020 LABYRINTH project (grant agreement H2020-MG-2019-TwoStages-861696), and by the TRUE5G project (PID2019-108713RB-C52PID2019-108713RB-C52 / AEI / 10.13039/501100011033) funded by the Spanish National Research Agency. In addition, the work of Borja Nogales, Ivan Vidal and Diego R. Lopez has partially been supported by the European H2020 5G-VINNI project (grant agreement number 815279). Finally, the authors thank Alejandro Rodríguez García for his support during the realization of this work

Impact of triple therapy in elderly patients with atrial fibrillation undergoing percutaneous coronary intervention

Background and Purpose: Selecting an ideal antithrombotic therapy for elderly patients with atrial fibrillation (AF) undergoing percutaneous coronary intervention (PCI) can be challenging since they have a higher thromboembolic and bleeding risk than younger patients. The current study aimed to assess the efficacy and safety of triple therapy (TT: oral anticoagulation plus dual antiplate- let therapy: aspirin plus clopidogrel) in patients > 75 years of age with atrial fibrillation (AF) undergoing percutaneous coronary intervention (PCI). Methods: A prospective multicenter study was conducted from 2003 to 2012 at 6 Spanish teaching hospitals. A cohort study of consecutive patients with AF undergoing PCI and treated with TT or dual antiplatelet therapy (DAPT) was analyzed. All outcomes were evaluated at 1- year of follow-up. Results: Five hundred and eighty-five patients, 289 (49%) of whom were > 75 years of age (79.6 ± 3.4 years; 33% women) were identified. TT was prescribed in 55.9% of patients at discharge who had a higher thromboembolic risk (CHA 2 DS 2 VASc score: 4.23 ± 1.51 vs 3.76 ± 1.40, p = 0.007 and a higher bleeding risk (HAS-BLED > 3: 88.6% vs 79.2%, p = 0.02) than those on DAPT. Therefore, patients on TT had a lower rate of thromboembolism than those on DAPT (0.6% vs 6.9%, p = 0.004; HR 0.08, 95% CI: 0.01 - 0.70, p = 0.004). Major bleeding events occurred more frequently in patients on TT than in those on DAPT (11.7% vs 2.4%, p = 0.002; HR 5.2, 95% CI: 1.53 - 17.57, p = 0.008). The overall mortality rate was similar in both treatment groups (11.9% vs 13.9%, p = 0.38); however, after adjustment for confounding variables, TT was associated with a reduced mortality rate (HR 0.33, 95% CI: 0.12 - 0.86, p = 0.02). Conclusions In elderly patients with AF undergoing PCI, the use of TT compared to DAPT was associ- ated with reduced thromboembolism and mortality rates, although a higher rate of major bleeding

Audiovestibular manifestations in patients with ankylosing spondylitis

Ankylosing spondylitis (AS) is a chronic inflammatory disease of unknown origin affecting up to 1% of the population. Little is known about audiovestibular impairment in patients with AS, especially the presence of cochleovestibular dysfunction in these patients. To investigate audiovestibular manifestations in AS, we studied a series of 50 consecutive patients who fulfilled the modified New York diagnostic criteria for AS and 44 matched controls. Individuals with history of cardiovascular disease, cerebrovascular complications, peripheral artery disease, renal insufficiency, syphilis, Meniere and other vestibular syndromes, infections involving the inner ear, barotrauma, or in treatment with ototoxic drugs were excluded. Most patients with AS were men (80%). The mean age at the time of study was 52.5 years, and mean age at the onset of symptoms was 34.4 years. Twenty-nine (58%) patients showed abnormal hearing loss in the audiogram compared to only 8 (18%) controls (p < 0.001). Values of audiometric tests (pure-tone average and speech reception threshold) yielded significant differences between patients and controls (p < 0.001). It is noteworthy that the audiogram shape disclosed a predominant pattern of high-frequency sensorineural hearing loss in AS patients (50%) compared to controls (18%) (p = 0.002). Also, AS patients exhibited abnormal vestibular tests more commonly than controls. AS patients had an increased frequency of head-shaking nystagmus (20%) compared to controls (0%) (p < 0.001). Moreover, patients (26%) showed a significantly increased frequency of abnormal caloric test compared to controls (0%) (p < 0.001). Finally, a significantly increased frequency of abnormal clinical test of sensory integration and balance with a predominant vestibular loss pattern was observed in patients (36%) compared to controls (5%) (p < 0.001). In conclusion, the current study demonstrates strong evidence for inner ear compromise in patients with AS

Effectiveness of Fosfomycin for the Treatment of Multidrug-Resistant Escherichia coli Bacteremic Urinary Tract Infections A Randomized Clinical Trial

Importance The consumption of broad-spectrum drugs has increased as a consequence of the spread of multidrug-resistant (MDR) Escherichia coli. Finding alternatives for these infections is critical, for which some neglected drugs may be an option. Objective To determine whether fosfomycin is noninferior to ceftriaxone or meropenem in the targeted treatment of bacteremic urinary tract infections (bUTIs) due to MDR E coli. Design, Setting, and Participants This multicenter, randomized, pragmatic, open clinical trial was conducted at 22 Spanish hospitals from June 2014 to December 2018. Eligible participants were adult patients with bacteremic urinary tract infections due to MDR E coli; 161 of 1578 screened patients were randomized and followed up for 60 days. Data were analyzed in May 2021. Interventions Patients were randomized 1 to 1 to receive intravenous fosfomycin disodium at 4 g every 6 hours (70 participants) or a comparator (ceftriaxone or meropenem if resistant; 73 participants) with the option to switch to oral fosfomycin trometamol for the fosfomycin group or an active oral drug or parenteral ertapenem for the comparator group after 4 days. Main Outcomes and Measures The primary outcome was clinical and microbiological cure (CMC) 5 to 7 days after finalization of treatment; a noninferiority margin of 7% was considered. Results Among 143 patients in the modified intention-to-treat population (median [IQR] age, 72 [62-81] years; 73 [51.0%] women), 48 of 70 patients (68.6%) treated with fosfomycin and 57 of 73 patients (78.1%) treated with comparators reached CMC (risk difference, −9.4 percentage points; 1-sided 95% CI, −21.5 to ∞ percentage points; P = .10). While clinical or microbiological failure occurred among 10 patients (14.3%) treated with fosfomycin and 14 patients (19.7%) treated with comparators (risk difference, −5.4 percentage points; 1-sided 95% CI, −∞ to 4.9; percentage points; P = .19), an increased rate of adverse event–related discontinuations occurred with fosfomycin vs comparators (6 discontinuations [8.5%] vs 0 discontinuations; P = .006). In an exploratory analysis among a subset of 38 patients who underwent rectal colonization studies, patients treated with fosfomycin acquired a new ceftriaxone-resistant or meropenem-resistant gram-negative bacteria at a decreased rate compared with patients treated with comparators (0 of 21 patients vs 4 of 17 patients [23.5%]; 1-sided P = .01). Conclusions and Relevance This study found that fosfomycin did not demonstrate noninferiority to comparators as targeted treatment of bUTI from MDR E coli; this was due to an increased rate of adverse event–related discontinuations. This finding suggests that fosfomycin may be considered for selected patients with these infections

The relative age effect on physical fitness in preschool children

The aim of the present study was to investigate the existence of a relative age effect (RAE) on physical fitness of preschoolers. Anthropometry and physical fitness were assessed in 3147 children (3–5 years old) using the PREFIT battery. Based on the birth year, participants were divided into 3year groups (3-, 4- and 5-years). Within each year group, 4quarter groups were created: quarter 1, preschoolers born from January to March; quarter 2, from April to June; quarter 3, from July to September; quarter 4, from October to December. The MANCOVA analysis revealed a main effect of year group (Wilks’ ¿ = 0.383; F10, 5996 = 369.64; p &lt; 0.001, ¿p 2 = 0.381) and of quarter (Wilks’ ¿ = 0.874; F15, 8276.6 = 27.67; p &lt; 0.001; ¿p 2 = 0.044) over the whole battery of tests. To the best of our knowledge, this is the first study to report the existence of RAE at the preschool stage. In general, performance improved as the relative age increased (i.e., those born in quarter 1 performed better than those in the other quarters). Individualization strategies should be addressed within the same academic year not only in elementary or secondary years but also in preschoolers

The relative effects of upwelling and river flow on the phytoplankton diversity patterns in the ria of A Coruña (NW Spain)

Phytoplankton species assemblages in estuaries are connected to those in rivers and marine environments by local hydrodynamics leading to a continuous flow of taxa. This study revealed differential effects of upwelling and river flow on phytoplankton communities observed in 2011 along a salinity gradient from a river reservoir connected to the sea through a ria-marine bay system in A Coruña (NW Spain, 43° 16-21’ N, 8° 16-22’ W). With 130 phytoplankton taxa identified, the assemblages were dominated in general by diatoms, particularly abundant in the bay and in the estuary, but also by chlorophycea and cyanobacteria in the reservoir. Considering the entire seasonal cycle, the local assemblages were mainly characterized by changes in cryptophytes and diatoms, small dinoflagellates and some freshwater chlorophycea. Salinity, nitrate, and organic matter variables, were the main environmental factors related to the changes in the phytoplankton communities through the system, while phosphate and nitrite were also important for local communities in the estuary and the bay, respectively. The corresponding local phytoplankton assemblages showed moderate levels of connectivity. The estuarine community shared a variable number of taxa with the adjacent zones, depending on the relative strength of upwelling (major influence from the bay) and river flow (major influence of the reservoir) but had on average 35% of unique taxa. Consequently, local and zonal diversity patterns varied seasonally and were not simply related to the salinity gradient driven by the river flow.ANILE (CTM2009-08396 and CTM2010-08804-E), FIOME (CTM2011-28792-C02-01-MAR), and MEFIO (CTM2011-28792-C02-02-MAR) of the Plan Nacional de I+D+i (Spain), and RADIALES of the Instituto Español de Oceanografía (IEO, Spain).Versión del editor2,01