Superconductivity in Li3Ca2C6 intercalated graphite

In this letter, we report the discovery of superconductivity in Li3Ca2C6. Several graphite intercalation compounds (GICs) with electron donors, are well known as superconductors. It is probably not astonishing, since it is generally admitted that low dimensionality promotes high superconducting transition temperatures. Superconductivity is lacking in pristine graphite, but after charging the graphene planes by intercalation, its electronic properties change considerably and superconducting behaviour can appear. Li3Ca2C6 is a ternary GIC, for which the intercalated sheets are very thick and poly-layered (five lithium layers and two calcium ones). It contains a great amount of metal (five metallic atoms for six carbon ones). Its critical temperature of 11.15 K is very close to that of CaC6 GIC (11.5 K). Both CaC6 and Li3Ca2C6 GICs possess currently the highest transition temperatures among all the GICs.Comment: 5 pages, 3 figure

Spatial distribution of pelagic fish off Adélie and George V Land, East Antarctica in the austral summer 2008

AbstractPelagic fish assemblages and community structure were examined along longitudinal and meridian transects off Adélie and George V Land, East Antarctica, in the austral summer 2008. Fish were sampled with an RMT 8 net principally from six discrete depth layers (0–50–100–200–500–1000–2000 m) in the oceanic zone and from three depth layers (0–50–100–200 m) over the continental shelf zone. A total of 20,281 individuals from 27 species were collected. Pleuragramma antarcticum was the most dominant species by number (18,710 inds), followed by Chionodraco hamatus (768), Trematomus newnesi (375), Cyclothone microdon (101), Electrona antarctica (92), Bathylagus antarcticus (51) and Notolepis coatsi (54). Cluster analysis revealed that the fish community was clearly divided at the Antarctic Slope Front into separate oceanic and shelf assemblages, being dominated by mesopelagic fish and notothenioids, respectively. The Southern Boundary of Antarctic Circumpolar Current likely restricted a more northern distribution of notothenioids in the upper 200 m. Mesopelagic fish dominated the large biomass below 500 m and notothenioids dominated that in the upper 100 m. It is considered that mesopelagic fish in the oceanic zone would unlikely be eaten by seabirds because no distinctive diel vertical migration to the surface layer was observed. In the neritic zone, notothenioids (C. hamatus, T. newnesi and P. antarcticum) possibly play an important role as prey items for flying seabirds, penguins and other notothenioids fish especially in the shallow depth stratum (0–100 m)

Genomes of three tomato pathogens within the Ralstonia solanacearum species complex reveal significant evolutionary divergence

<p>Abstract</p> <p>Background</p> <p>The <it>Ralstonia solanacearum </it>species complex includes thousands of strains pathogenic to an unusually wide range of plant species. These globally dispersed and heterogeneous strains cause bacterial wilt diseases, which have major socio-economic impacts. Pathogenicity is an ancestral trait in <it>R. solanacearum </it>and strains with high genetic variation can be subdivided into four phylotypes, correlating to isolates from Asia (phylotype I), the Americas (phylotype IIA and IIB), Africa (phylotype III) and Indonesia (phylotype IV). Comparison of genome sequences strains representative of this phylogenetic diversity can help determine which traits allow this bacterium to be such a pathogen of so many different plant species and how the bacteria survive in many different habitats.</p> <p>Results</p> <p>The genomes of three tomato bacterial wilt pathogens, CFBP2957 (phy. IIA), CMR15 (phy. III) and PSI07 (phy. IV) were sequenced and manually annotated. These genomes were compared with those of three previously sequenced <it>R. solanacearum </it>strains: GMI1000 (tomato, phy. I), IPO1609 (potato, phy. IIB), and Molk2 (banana, phy. IIB). The major genomic features (size, G+C content, number of genes) were conserved across all of the six sequenced strains. Despite relatively high genetic distances (calculated from average nucleotide identity) and many genomic rearrangements, more than 60% of the genes of the megaplasmid and 70% of those on the chromosome are syntenic. The three new genomic sequences revealed the presence of several previously unknown traits, probably acquired by horizontal transfers, within the genomes of <it>R. solanacearum</it>, including a type IV secretion system, a rhi-type anti-mitotic toxin and two small plasmids. Genes involved in virulence appear to be evolving at a faster rate than the genome as a whole.</p> <p>Conclusions</p> <p>Comparative analysis of genome sequences and gene content confirmed the differentiation of <it>R. solanacearum </it>species complex strains into four phylotypes. Genetic distances between strains, in conjunction with CGH analysis of a larger set of strains, revealed differences great enough to consider reclassification of the <it>R. solanacearum </it>species complex into three species. The data are still too fragmentary to link genomic classification and phenotypes, but these new genome sequences identify a pan-genome more representative of the diversity in the <it>R. solanancearum </it>species complex.</p

Genome sequencing of Xanthomonas axonopodis pv. phaseoli CFBP4834-R reveals that flagellar motility is not a general feature of xanthomonads.

Xanthomonads are plant-associated bacteria that establish neutral, commensal or pathogenic relationships with plants. The list of common characteristics shared by all members of the genus Xanthomonas is now well established based on the entire genome sequences that are currently available and that represent various species, numerous pathovars of X. axonopodis (sensu Vauterin et al., 2000), X. oryzae and X. campestris, and many strains within some pathovars. These ?-proteobacteria are motile by a single polar flagellum. Motility is an important feature involved in biofilm formation, plant colonization and hence considered as a pathogenicity factor. X. axonopodis pv. phaseoli var. fuscans (Xapf) is one of the causal agents of common bacterial blight of bean and 4834-R is a highly aggressive strain of this pathogen that was isolated from a seed-borne epidemic in France in 1998. We obtained a high quality assembled sequence of the genome of this strain with 454-Solexa and 2X Sanger sequencing. Housekeeping functions are conserved in this genome that shares core characteristics with genomes of other xanthomonads: the six secretion systems which have been described so far in Gram negative bacteria are all present, as well as their ubiquitous substrates or effectors and a rather usual number of mobile elements. Elements devoted to the adaptation to the environment constitute an important part of the genome with a chemotaxis island and dispersed MCPs, numerous two-component systems, and numerous TonB dependent transporters. Furthermore, numerous multidrug efflux systems and functions dedicated to biofilm formation that confer resistance to stresses are also present. An intriguing feature revealed by genome analysis is a long deletion of 35 genes (33 kbp) involved in flagellar biosynthesis. This deletion is replaced by an insertion sequence called ISXapf2. Genes such as flgB to flgL and fliC to fleQ which are involved in the flagellar structure (rod, P- and L-ring, hook, cap and filament) are absent in the genome of strain 4834-R that is not motile. Primers were designed to detect this deletion by PCR in a collection of more than 300 strains representing different species and pathovars of Xanthomonas, and less than 5% of the tested xanthomonads strains were found nonmotile because of a deletion in the flagellum gene cluster. We observed that half of the Xapf strains isolated from the same epidemic than strain 4834-R was non-motile and that this ratio was conserved in the strains colonizing the next bean seed generation. Isolation of such variants in a natural epidemic reveals that either flagellar motility is not a key function for fitness or that some complementation occurs within the bacterial population. (Résumé d'auteur