Moonlighting in Mitosis: Analysis of the Mitotic Functions of Transcription and Splicing Factors

Moonlighting proteins can perform one or more additional functions besides their primary role. It has been posited that a protein can acquire a moonlighting function through a gradual evolutionary process, which is favored when the primary and secondary functions are exerted in different cellular compartments. Transcription factors (TFs) and splicing factors (SFs) control processes that occur in interphase nuclei and are strongly reduced during cell division, and are therefore in a favorable situation to evolve moonlighting mitotic functions. However, recently published moonlighting protein databases, which comprise almost 400 proteins, do not include TFs and SFs with secondary mitotic functions. We searched the literature and found several TFs and SFs with bona fide moonlighting mitotic functions, namely they localize to specific mitotic structure(s), interact with proteins enriched in the same structure(s), and are required for proper morphology and functioning of the structure(s). In addition, we describe TFs and SFs that localize to mitotic structures but cannot be classified as moonlighting proteins due to insufficient data on their biochemical interactions and mitotic roles. Nevertheless, we hypothesize that most TFs and SFs with specific mitotic localizations have either minor or redundant moonlighting functions, or are evolving towards the acquisition of these functions

Moonlighting in mitosis:Analysis of the mitotic functions of transcription and splicing factors

Moonlighting proteins can perform one or more additional functions besides their primary role. It has been posited that a protein can acquire a moonlighting function through a gradual evolutionary process, which is favored when the primary and secondary functions are exerted in different cellular compartments. Transcription factors (TFs) and splicing factors (SFs) control processes that occur in interphase nuclei and are strongly reduced during cell division, and are therefore in a favorable situation to evolve moonlighting mitotic functions. However, recently published moonlighting protein databases, which comprise almost 400 proteins, do not include TFs and SFs with secondary mitotic functions. We searched the literature and found several TFs and SFs with bona fide moonlighting mitotic functions, namely they localize to specific mitotic structure(s), interact with proteins enriched in the same structure(s), and are required for proper morphology and functioning of the structure(s). In addition, we describe TFs and SFs that localize to mitotic structures but cannot be classified as moonlighting proteins due to insufficient data on their biochemical interactions and mitotic roles. Nevertheless, we hypothesize that most TFs and SFs with specific mitotic localizations have either minor or redundant moonlighting functions, or are evolving towards the acquisition of these functions

Transcriptome‐based phylogeny of endemic Lake Baikal amphipod species flock: fast speciation accompanied by frequent episodes of positive selection

Endemic species flocks inhabiting ancient lakes, oceanic islands and other long‐lived isolated habitats are often interpreted as adaptive radiations. Yet molecular evidence for directional selection during species flocks radiation is scarce. Using partial transcriptomes of 64 species of Lake Baikal (Siberia, Russia) endemic amphipods and two nonendemic outgroups, we report a revised phylogeny of this species flock and analyse evidence for positive selection within the endemic lineages. We confirm two independent invasions of amphipods into Baikal and demonstrate that several morphological features of Baikal amphipods, such as body armour and reduction in appendages and sensory organs, evolved in several lineages in parallel. Radiation of Baikal amphipods has been characterized by short phylogenetic branches and frequent episodes of positive selection which tended to be more frequent in the early phase of the second invasion of amphipods into Baikal when the most intensive diversification occurred. Notably, signatures of positive selection are frequent in genes encoding mitochondrial membrane proteins with electron transfer chain and ATP synthesis functionality. In particular, subunits of both the membrane and substrate‐level ATP synthases show evidence of positive selection in the plankton species Macrohectopus branickii, possibly indicating adaptation to active plankton lifestyle and to survival under conditions of low temperature and high hydrostatic pressures known to affect membranes functioning. Other functional categories represented among genes likely to be under positive selection include Ca‐binding muscle‐related proteins, possibly indicating adaptation to Ca‐deficient low mineralization Baikal waters.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/136009/1/mec13927.pdfhttp://deepblue.lib.umich.edu/bitstream/2027.42/136009/2/mec13927_am.pd

Recrystallization of CaCO3 submicron magnetic particles in biological media

Background and Objectives: The development of magnetic theranostics is associated with the determination of the behavior of magnetic carriers in biosimilar media. In this work, we analyze the formation of different crystalline phases from magnetic mineral submicron calcium carbonate particles during incubation under conditions of cell cultivation in vitro for 3 days. The study of mineralmagneticsubmicron particles recrystallization was analyzed by XRD and electron scanning microscopy. The shape of calcium carbonate particles begins to change from elliptical to spherical under cell culture cultivations. As the amount of magnetite nanoparticle particles in calcium carbonate increases, the recrystallization process is faster with fallout of calcite, vaterite and magnetite phases. Materials and Methods: Scanning electron microscopy, processing of results using a self-written Python code, XRDwere utilized in this study. Results: The study of the process of recrystallization of magnetic mineral particles shows has shown that increasing the content of magnetic carriers leads to accelerated recrystallization of particles with simultaneous precipitation of calcite, vaterite and magnetite phases. Conclusion: Magnetic mineral submicron calcium carbonate particles are promising targets for theranostics with the self-destruction property in biological environments

Global Understanding and Learning for Local Solutions: Reducing vulnerability of marine-dependent coastal communities (GULLS)- Belmont Forum Initiative on Collaborative Research Actions

The project ‘Global learning for local solutions: Reducing vulnerability of marine-dependent coastal communities’ or GULLS, is an international project within the Belmont Forum and G8 Research Councils Initiative on Multilateral Research Funding. The project has been investigating five regional ‘hotspots’ of climate and social change, defined as fast-warming marine areas and areas experiencing social tensions as a result of change: south-east Australia, Brazil, India, South Africa, and the Mozambique Channel and Madagascar. It has focused on contributing to reducing the vulnerability of coastal communi-ties and other stakeholders dependent on marine resources to adapt to climate change and variability through an integrated and trans-disciplinary approach. It includes partici-pants from Australia, Brazil, India, Madagascar, South Africa, the United Kingdom and the United States of America. The research programme has been divided into five inter-linked components: ocean and climate change models, species vulnerability, social as-pects, system modelling, governance, and communication and education

Identification of aluminum resistant genotypes among Madeiran regional wheats

Forty-eight genotypes representing wheat diversity from the Island of Madeira were screened for resistance to aluminum (Al) in nutrient solution. Seeds of wheat used in the experiments were obtained from local farmers. The soil pH and content of ionic Al of plots cultivated with wheat were analyzed. The pH of topsoils varied between 3.83 and 6.59. The amount of ionic Al in soil samples varied between 0.38 and 1.36 cmol Al3 + per kg of soil and was positively correlated with the altitude of a plot. Eriochrome cyanine staining was used to evaluate the effect of Al ions on the root elongation. Seventy-two hour exposure of 3-day-old seedlings to 100 and 200 mM Al in nutrient solution revealed a high number of Al resistant genotypes among wheat germplasm. After withdrawal of Al stress, survival and root regrowth was observed in 28 and 23 genotypes screened at 100 and 200 mM Al in nutrient solution, respectively. Enhanced resistance to Al among Madeiran genotypes was associated with the amount of ionic Al in the soils. Complexity and various patterns of responses of tested cultivars to Al stress may suggest that Madeiran germplasm could be a valuable source of genes controlling Al resistance for conventional breeding programs and for studies of molecular bases of mechanisms of Al resistance.Portuguese Foundation for the Science and Technology (FCT, Fundac¸o para a Cieˆncia e Tecnologia) has sponsored this work, through the Centre of Biological and Geological Sciences (C.C.B.G.) and the project POCTI/no. 33005/AGR/1999. The authors are also grateful to the Madeiran Centre of Science and Technology (CITMA) for financial support. Acknowledgements are due to Mr. Roge´rio Correia and Juan Silva for the technical assistance in conducting the laboratory and fieldwork and to Dr. Andrzej Aniol for valuable advice during preparation of this manuscript.info:eu-repo/semantics/publishedVersio