539 research outputs found
Characterization of Smallholder Beef Cattle Production System in Central Vietnam –Revealing Performance, Trends, Constraints, and Future Development
The objective of this study is to evaluate the characteristics of smallholder beef cattle production in Central Vietnam. A total of 360 households were interviewed by using semi-structured questionnaire; a total of 606 beef cows were investigated for evaluating calving interval (CI). Thirty-two fattening cattle were monitored for the estimation of diet structure. Results showed that the cattle herd size was 4.32-4.45 cattle/household. In North Central (NC), 55% of surveyed farmers kept local cattle, 45% kept crossbreeds, and none of surveyed farmers keeping exotic breeds. In South Central (SC), 63% of surveyed farmers kept cross cattle, 32% kept local cattle, and 5% kept exotic breeds. In the breeding method, 70% of surveyed farmers used artificial insemination (AI), 20% used natural mating (NM), and only 10% used both AI and NM in SC, whereas in NC 40% of farmers used AI, 40% used NM, and 20% used both AI and NM. The variety of feedstuffs fed to cattle including roughages and concentrate. The concentrate in the diet for fattening cattle was 25%-35% and protein level was 11%-13%, and the average daily gain of cattle was 0.51-0.63 kg/day. The CI of cows was 12-13 months in SC, whereas in NC it was 13-14 months. There were numerous constraints to cattle production in surveyed households including diseases, lack of good quality feed sources, breeds, knowledge, and lack of capital. In conclusion, cattle production in Central Vietnam is small scale and still largely extensive. There are constraints that must be solved to improve livestock systems in the near future, especially when shifting towards semi-intensive and/or intensive cattle production systems.
Transport Phenomena and Structuring in Shear Flow of Suspensions near Solid Walls
In this paper we apply the lattice-Boltzmann method and an extension to
particle suspensions as introduced by Ladd et al. to study transport phenomena
and structuring effects of particles suspended in a fluid near sheared solid
walls. We find that a particle free region arises near walls, which has a width
depending on the shear rate and the particle concentration. The wall causes the
formation of parallel particle layers at low concentrations, where the number
of particles per layer decreases with increasing distance to the wall.Comment: 14 pages, 14 figure
Influence of Hydrodynamic Interactions on Mechanical Unfolding of Proteins
We incorporate hydrodynamic interactions in a structure-based model of
ubiquitin and demonstrate that the hydrodynamic coupling may reduce the peak
force when stretching the protein at constant speed, especially at larger
speeds. Hydrodynamic interactions are also shown to facilitate unfolding at
constant force and inhibit stretching by fluid flows.Comment: to be published in Journal of Physics: Condensed Matte
CURTAIN – A unique web-based tool for exploration and sharing of MS-based proteomics data
To facilitate analysis and sharing of mass spectrometry (MS)-based proteomics data, we created online tools called CURTAIN (https://curtain.proteo.info) and CURTAIN-PTM (https://curtainptm.proteo.info) with an accompanying series of video tutorials (https://www.youtube.com/@CURTAIN-me6hl). These are designed to enable non-MS experts to interactively peruse volcano plots and deconvolute primary experimental data so that replicates can be visualized in bar charts or violin plots and exported in publication-ready format. They also allow assessment of overall experimental quality by correlation matrix and profile plot analysis. After making a selection of protein "hits", the user can analyze known domain structure, AlphaFold predicted structure, reported interactors, relative expression as well as disease links. CURTAIN-PTM permits analysis of all identified PTM sites on protein(s) of interest with selected databases. CURTAIN-PTM also links with the Kinase Library to predict upstream kinases that may phosphorylate sites of interest. We provide examples of the utility of CURTAIN and CURTAIN-PTM in analyzing how targeted degradation of the PPM1H Rab phosphatase that counteracts the Parkinson's LRRK2 kinase impacts cellular protein levels and phosphorylation sites. We also reanalyzed a ubiquitylation dataset, characterizing the PINK1-Parkin pathway activation in primary neurons, revealing data of interest not highlighted previously. CURTAIN and CURTAIN-PTM are free to use and open source, enabling researchers to share and maximize the impact of their proteomics data. We advocate that MS data published in volcano plot format be reported containing a shareable CURTAIN weblink, thereby allowing readers to better analyze and exploit the data.</p
P04-03. Cross-clade neutralization analysis of plasmas from clade B, C and CRF01_AE HIV-infected donors
Alterations in mGluR5 Expression and Signaling in Lewy Body Disease and in Transgenic Models of Alpha- Synucleinopathy – Implications for Excitotoxicity
Dementia with Lewy bodies (DLB) and Parkinson’s Disease (PD) are neurodegenerative disorders of the aging population characterized by the abnormal accumulation of alpha-synuclein (alpha-syn). Previous studies have suggested that excitotoxicity may contribute to neurodegeneration in these disorders, however the underlying mechanisms and their relationship to alpha-syn remain unclear. For this study we proposed that accumulation of alpha-syn might result in alterations in metabotropic glutamate receptors (mGluR), particularly mGluR5 which has been linked to deficits in murine models of PD. In this context, levels of mGluR5 were analyzed in the brains of PD and DLB human cases and alpha-syn transgenic (tg) mice and compared to age-matched, unimpaired controls, we report a 40% increase in the levels of mGluR5 and beta-arrestin immunoreactivity in the frontal cortex, hippocampus and putamen in DLB cases and in the putamen in PD cases. In the hippocampus, mGluR5 was more abundant in the CA3 region and co-localized with alpha-syn aggregates. Similarly, in the hippocampus and basal ganglia of alpha-syn tg mice, levels of mGluR5 were increased and mGluR5 and alpha-syn were co-localized and co-immunoprecipated, suggesting that alpha-syn interferes with mGluR5 trafficking. The increased levels of mGluR5 were accompanied by a concomitant increase in the activation of downstream signaling components including ERK, Elk-1 and CREB. Consistent with the increased accumulation of alpha-syn and alterations in mGluR5 in cognitive- and motor-associated brain regions, these mice displayed impaired performance in the water maze and pole test, these behavioral alterations were reversed with the mGluR5 antagonist, MPEP. Taken together the results from study suggest that mGluR5 may directly interact with alpha-syn resulting in its over activation and that this over activation may contribute to excitotoxic cell death in select neuronal regions. These results highlight the therapeutic importance of mGluR5 antagonists in alpha-synucleinopathies
On the Convergence of Kergin and Hakopian Interpolants at Leja Sequences for the Disk
We prove that Kergin interpolation polynomials and Hakopian interpolation
polynomials at the points of a Leja sequence for the unit disk of a
sufficiently smooth function in a neighbourhood of converge uniformly
to on . Moreover, when is on , all the derivatives of
the interpolation polynomials converge uniformly to the corresponding
derivatives of
Load Shedding in Microgrids with Dual Neural Networks and AHP Algorithm
This paper proposes a new load shedding method based on the application of a Dual Neural Network (NN). The combination of a Back-Propagation Neural Network (BPNN) and of Particle Swarm Optimization (PSO) aims to quickly predict and propose a load shedding strategy when a fault occurs in the microgrid (MG) system. The PSO algorithm has the ability to search and compare multiple points, so the proposed NN training method helps determine the link weights faster and stronger. As a result, the proposed method saves training time and achieves higher accuracy. The Analytic Hierarchy Process (AHP) algorithm is applied to rank the loads based on their importance factor. The results of the ratings of the loads serve as a basis for constructing the load shedding strategies of a NN combined with the PSO algorithm (ANN-PSO). The proposed load shedding method is tested on an IEEE 25-bus 8-generator MG power system. The simulation results show that the frequency recovery of the power system is positive. The proposed neural network adapts well to the simulated data of the system and achieves high performance in fault prediction
Redox proteomics of the inflammatory secretome identifies a common set of redoxins and other glutathionylated proteins released in inflammation, influenza virus infection and oxidative stress
Protein cysteines can form transient disulfides with glutathione (GSH), resulting in the production of glutathionylated proteins, and this process is regarded as a mechanism by which the redox state of the cell can regulate protein function. Most studies on redox regulation of immunity have focused on intracellular proteins. In this study we have used redox proteomics to identify those proteins released in glutathionylated form by macrophages stimulated with lipopolysaccharide (LPS) after pre-loading the cells with biotinylated GSH. Of the several proteins identified in the redox secretome, we have selected a number for validation. Proteomic analysis indicated that LPS stimulated the release of peroxiredoxin (PRDX) 1, PRDX2, vimentin (VIM), profilin1 (PFN1) and thioredoxin 1 (TXN1). For PRDX1 and TXN1, we were able to confirm that the released protein is glutathionylated. PRDX1, PRDX2 and TXN1 were also released by the human pulmonary epithelial cell line, A549, infected with influenza virus. The release of the proteins identified was inhibited by the anti-inflammatory glucocorticoid, dexamethasone (DEX), which also inhibited tumor necrosis factor (TNF)-α release, and by thiol antioxidants (N-butanoyl GSH derivative, GSH-C4, and N-acetylcysteine (NAC), which did not affect TNF-α production. The proteins identified could be useful as biomarkers of oxidative stress associated with inflammation, and further studies will be required to investigate if the extracellular forms of these proteins has immunoregulatory functions
Application of mixed formulations of quasi-reversibility to solve ill-posed problems for heat and wave equations: the 1d case
International audienceIn this paper we address some ill-posed problems involving the heat or the wave equation in one dimension, in particular the backward heat equation and the heat/wave equation with lateral Cauchy data. The main objective is to introduce some variational mixed formulations of quasi-reversibility which enable us to solve these ill-posed problems by using some classical La-grange finite elements. The inverse obstacle problems with initial condition and lateral Cauchy data for heat/wave equation are also considered, by using an elementary level set method combined with the quasi-reversibility method. Some numerical experiments are presented to illustrate the feasibility for our strategy in all those situations. 1. Introduction. The method of quasi-reversibility has now a quite long history since the pioneering book of Latt es and Lions in 1967 [1]. The original idea of these authors was, starting from an ill-posed problem which satisfies the uniqueness property, to introduce a perturbation of such problem involving a small positive parameter ε. This perturbation has essentially two effects. Firstly the perturbation transforms the initial ill-posed problem into a well-posed one for any ε, secondly the solution to such problem converges to the solution (if it exists) to the initial ill-posed problem when ε tends to 0. Generally, the ill-posedness in the initial problem is due to unsuitable boundary conditions. As typical examples of linear ill-posed problems one may think of the backward heat equation, that is the initial condition is replaced by a final condition, or the heat or wave equations with lateral Cauchy data, that is the usual Dirichlet or Neumann boundary condition on the boundary of the domain is replaced by a pair of Dirichlet and Neumann boundary conditions on the same subpart of the boundary, no data being prescribed on the complementary part of the boundary
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