Management Practices of Members of the Louisiana Quarter Horse Breeders\u27 Association, 1979.

The purpose of this study was to determine the educational needs of Louisiana Quarter Horse breeders (owners) based on an analysis of their current management practices, and to determine the association of these practices with age of breeder, education of breeder and primary reason for owning Quarter Horses. The data were obtained by phone and personal interviews of 100 of the 838 in-state members of the Louisiana Quarter Horse Breeders\u27 Association. The chi-square test was applied to determine statistically significant associations at the .20 level of probability. The specific objectives of the study were: (1) To develop a personal profile of the membership of the Louisiana Quarter Horse Breeders\u27 Association, 1979. (2) To compare the herd management, breeding, nutrition and health practices followed by Quarter Horse owners as related to their age, education and purpose for owning. (3) To identify educational needs of Louisiana\u27s Quarter Horse owners in horse production. Results showed the average member of the Louisiana Quarter Horse Breeders\u27 Association: was 42 years old, had one year of college, owned nine Quarter Horses (two stallions, six mares and one gelding) with a total value of $55,000, had almost 23 years experience with horses, had almost 53 acres devoted to horses, had 14 stalls in his horse barn, had one horse insured, had barbed wire fencing, felt his veterinarian was his best source of information, felt he needed to increase his knowledge on herd health, had either a professional or business occupation, felt racing was his primary reason for owning Quarter Horses, and considered finances (inflation, prices, money, economics) and breeding as his major problems in raising Quarter Horses. The findings of this study were in many ways consistent with other studies pertaining to agricultural production in that the larger and higher educated breeders used more of the recommended management practices than the smaller, less educated owners. Breeding/ranch work owners were the highest educated breeders and had the highest level of adoption of recommended management practices. Education was directly related to level of adoption of management practices. The more education a breeder had, the more recommended management practices he had adopted. Results of the study differed from most studies with respect to age of producer. Quarter Horse owners in the 40 to 49 year old category tended to have a higher level of adoption than other aged breeders. Most agricultural studies show an inverse relationship between age and level of adoption. The youngest breeders in this study had the lowest level of adoption. The dependent variable primary reason for owning Quarter Horses showed breeding/ranch work owners had the highest level of adoption, followed by racing, halter/performance and recreation/pleasure. This was the first time that variable had been studied, therefore there was no previous study with which to compare. Louisiana Quarter Horse owners do not use Extension as a source of information. It is generally felt that agents do not have a high degree of expertise in horse production. However, breeders are lacking knowledge on pasture/forage/soil practices. This is an area in which Extension can offer immediate assistance. Louisiana breeders\u27 three weakest management areas are soil management, breeding and nutrition. Breeders have not adopted recommended practices into their management programs. Strong educational programs should be directed to these areas

A Global Assessment of Gold, Titanium, Strontium and Barium Pollution Using Sperm Whales (Physeter Macrocephalus) As an Indicator Species

This study provides a global baseline for barium, gold, titanium and strontium as marine pollutants using the sperm whale (Physeter macrocephalus) as an indicator species. Barium, gold, titanium and strontium are metals that are little studied in marine environments. However, their recent emergence as nanomaterials will likely increase their presence in the marine environment. Moreover, nanosized particles are likely to exhibit toxic outcomes not seen in macrosized particles. Biopsies from free ranging sperm whales were collected from around the globe. Total barium levels were measured in 275 of 298 sperm whales tested for barium and collected from 16 regions around the globe. The global mean for barium was 0.93 +/- 0.2ug/g with a detectable range from 0.1 to 27.9ug. Total strontium levels were measurable in all 298 sperm whales producing a global mean level of 2.2 +/- 0.1ug/g and a range from 0.2 to 11.5ug/g. Total titanium levels were also measured in all 298 sperm whales producing a global mean level of 4.5 +/- 0.25ug/g with a range from 0.1 to 29.8ug/g. Total gold levels were detected in 50 of the 194 sperm whales collected from 16 regions around the globe. Detectable levels ranged from 0.1 to 2.3ug/g tissue with a global mean level equal to 0.2 +/- 0.02ug/g. Previous reports of these metals were much lower than the mean levels reported here. The likely explanation is location differences and consistent with this explanation, we found statistically significant variation among regions. These data provide an important global baseline for barium, gold, titanium and strontium pollution and will allow for important comparisons to be made over time to assess the impact of nanomaterials on whales and the marine environment

Genetic Architecture of a Reinforced, Postmating, Reproductive Isolation Barrier between Neurospora Species Indicates Evolution via Natural Selection

A role for natural selection in reinforcing premating barriers is recognized, but selection for reinforcement of postmating barriers remains controversial. Organisms lacking evolvable premating barriers can theoretically reinforce postmating isolation, but only under restrictive conditions: parental investment in hybrid progeny must inhibit subsequent reproduction, and selected postmating barriers must restore parents' capacity to reproduce successfully. We show that reinforced postmating isolation markedly increases maternal fitness in the fungus Neurospora crassa, and we detect the evolutionary genetic signature of natural selection by quantitative trait locus (QTL) analysis of the reinforced barrier. Hybrid progeny of N. crassa and N. intermedia are highly inviable. Fertilization by local N. intermedia results in early abortion of hybrid fruitbodies, and we show that abortion is adaptive because only aborted maternal colonies remain fully receptive to future reproduction. In the first QTL analysis of postmating reinforcement in microbial eukaryotes, we identify 11 loci for abortive hybrid fruitbody development, including three major QTLs that together explain 30% of trait variance. One of the major QTLs and six QTLs of lesser effect are found on the mating-type determining chromosome of Neurospora. Several reinforcement QTLs are flanked by genetic markers showing either segregation distortion or non-random associations with alleles at other loci in a cross between N. crassa of different clades, suggesting that the loci also are associated with local effects on same-species reproduction. Statistical analysis of the allelic effects distribution for abortive hybrid fruitbody development indicates its evolution occurred under positive selection. Our results strongly support a role for natural selection in the evolution of reinforced postmating isolation in N. crassa

2003 AAPP Monograph Series

It is significant that the African American Professors Program (AAPP) at the University of South Carolina is producing the third edition of its annual monograph series at this time-the fifth anniversary of AAPP. The program graciously accepts the challenge of putting into place a requirement for the scholars to produce quality research papers worthy of publication. This provides widespread visibility for them and enhances their curriculum vitae concurrently. Scholars who have contributed manuscripts for this monograph are to be commended for adding this additional responsibility to their academic workload. Writing across disciplines adds to the intellectual diversity of these papers. From neophytes, relatively speaking, to an array of very experienced individuals, the chapters have been researched and comprehensively written. Founded in 1997 through the Department of Educational Leadership and Policies in the College of Education, AAPP was designed to address the underrepresentation of African American professors on college and university campuses. Its mission is to expand the pool of these professors in critical academic and research areas. Sponsored by the University of South Carolina, the W. K. Kellogg Foundation, and the South Carolina General Assembly, the program recruits students with bachelor\u27s, master\u27s, and doctoral degrees for disciplines in which African Americans currently are underrepresented. An important component of the program is the mentoring experience that is provided. Each student is assigned to a mentor/professor who guides the student through a selected academic program and provides various learning experiences. When possible, the mentor serves as chair of the student\u27s doctoral committee. The mentor also provides opportunities for the student to team teach, conduct research, and co-author publications. Students have the advantage of attending committee, faculty, and professional meetings, as well as engaging in a range of activities that characterize professional life in academia. Scholars enrolled in the program also are involved in programmatic and institutional workshops, independent research, and program development. The continuation of this monograph series is seen as responding to a window of opportunity to be sensitive to an academic expectation of graduates as they pursue career placement and, at the same time, one that allows for the dissemination of AAPP products to a broader community. The importance of this monograph series has been voiced by one of our 2002 AAPP graduates, Dr. Shundelle LaTjuan Dogan, a recent Harvard Administrative Fellow at Harvard University and now Program Officer for the Southern Education Foundation, Atlanta, Georgia. Dr. Dogan wrote: One thing in particular that I want to thank you for is having the African American Professors Program scholars publish articles for the monograph. I have to admit that writing the articles seemed like extra work at the time. However, in my recent interview process, organizations have asked me for samples of my writing. Including an article from a published monograph helped to make my portfolio much more impressive. You were right on target in having us do the monograph series. We hope that you will read this monograph of the African American Professors Program with enthusiasm or enlightenment. John McFadden, Ph.D. The Benjamin Elijah Mays Professor Director, African American Professors Program University of South Carolinahttps://scholarcommons.sc.edu/mcfadden_monographs/1006/thumbnail.jp

1995 CSREES Reports

The 1995 edition of the CSREES Reports was prepared for the Maine Wild Blueberry Commission and the University of Maine Wild Blueberry Advisory Committee by researchers at the University of Maine, Orono. Projects in this report include: 1. Factors Affecting the Quality of IQF Blueberries 2. Preventing the Bleeding of Blueberry Fruit in Bakery Products 3. Removing Water from Blueberries Before Freezing 4. Determination of Pesticide Residue Levels in Freshly Harvested and Processed Lowbush Blueberries 5. Industrial Ingredients from Cull Blueberries 6. Application of Heat as a Method of Controlling Secondary Pest Insects on Lowbush Blueberries 7. The Phenology and Biology of Bumble Bees, Bombus, spp., that Pollinate Lowbush blueberry, Vaccinium spp., in Maine 8. Pollination Ecology of Lowbush Blueberry in Maine 9. Effects of Irrigation on Lowbush Blueberry Yield 10. Effect of Brief Warming Treatments on Late Winter Low-Temperature Tolerance of Native Lowbush Blueberry 11. Correlation of Late-winter/Early-spring Cold Hardiness with Date of Flowering 12. Evaluation of Cold Tolerance of Opening Flowers of Lowbush Blueberry 13. Influence of Flower Delaying Sprays on Seasonal Variation of Low Temperature Tolerance in Lowbush Blueberry 14. Effect of Various Levels of Disbudding on Yield of Lowbush Blueberry 15. Effect of Boron and the Polyamine Putrescine on Lowbush Blueberry Fruit Set and Yield 16. Effect of Boron and the Polyamine Putrescine on Extending the Receptivity of Lowbush Blueberry Blossoms 17. Effect of Soil pH on Nutrient Uptake 18. Correcting Boron Deficiency - missing 19. Phosphorus Uptake 20. Evaluation of Hexazinone Formulation on Soil Movement and Weed Control 21. Effect of Time of Fall Pruning on Growth and Productivity of Blueberries 22. Hexazinone Ground Water Survey 23. Effect of hexazinone formulation on movement through the soil profile 24. Evaluation of Tribenuron Methyl for Bunchberry Control 25. Evaluation of Tribenuron Methyl Commercial Applications for Bunchberry Control 26. Effectiveness of Resin-Exchange Columns to Determine Efficacy in Removing Hexazinone from Well Water 27. Effect of Clopyralid for Vetch Control 28. Evaluation of Tribenuron Methyl/Velpar® Tank Mix for Bunchberry Control 29. Blueberry Extension Education Progra

2005 AAPP Monograph Series

The African American Professors Program (AAPP) at the University of South Carolina is proud to publish the fifth edition of its annual monograph series. The program recognizes the significance of offering its scholars avenue to engage actively in research and publish papers related thereto. Parallel with the publication of their refereed manuscripts is the opportunity to gain visibility among scholars throughout institutions worldwide. Scholars who have contributed manuscripts for this monograph are to be commended for adding this additional responsibility to their academic workload. Writing across disciplines adds to the intellectual diversity of these papers. From neophytes, relatively speaking, to an array of very experienced individuals, the chapters have been researched and comprehensively written. Founded in 1997 through the Department of Educational Leadership and Policies in the College of Education, AAPP was designed to address the underrepresentation of African American professors on college and university campuses. Its mission is to expand the pool of these professors in critical academic and research areas. Sponsored by the University of South Carolina, the W. K. Kellogg Foundation, and the South Carolina General Assembly, the program recruits doctoral students for disciplines in which African Americans currently are underrepresented among faculty in higher education. The continuation of this monograph series is seen as responding to a window of opportunity to be sensitive to an academic expectation of graduates as they pursue career placement and, at the same time, one that allows for the dissemination of AAPP products to a broader community. The importance of this monograph series has been voiced by one of our 2002 AAPP graduates, Dr. Shundele LaTjuan Dogan, a recent Administrative Fellow at Harvard University and now a Program Officer for the Southern Education Foundation, Atlanta, Georgia. Dr. Dogan wrote: One thing in particular that I want to thank you for is having the African American Professors Program scholars publish articles for the monograph. I have to admit that writing the articles seemed like extra work at the time. However, in my recent interview process, organizations have asked me for samples of my writing. Including an article from a published monograph helped to make my portfolio much more impressive. You were \u27right on target\u27 in having us do the monograph series. (MPP 2003 Monograph, p. xi) The African American Professors Program offers this 2005 publication as a contribution to its readership and hopes that you will be inspired by this select group of manuscripts. John McFadden, Ph.D. The Benjamin Elijah Mays Professor Director, African American Professors Program University of South Carolinahttps://scholarcommons.sc.edu/mcfadden_monographs/1007/thumbnail.jp

Quantitative cross-species extrapolation between humans and fish: The case of the anti-depressant fluoxetine

This article has been made available through the Brunel Open Access Publishing Fund.Fish are an important model for the pharmacological and toxicological characterization of human pharmaceuticals in drug discovery, drug safety assessment and environmental toxicology. However, do fish respond to pharmaceuticals as humans do? To address this question, we provide a novel quantitative cross-species extrapolation approach (qCSE) based on the hypothesis that similar plasma concentrations of pharmaceuticals cause comparable target-mediated effects in both humans and fish at similar level of biological organization (Read-Across Hypothesis). To validate this hypothesis, the behavioural effects of the anti-depressant drug fluoxetine on the fish model fathead minnow (Pimephales promelas) were used as test case. Fish were exposed for 28 days to a range of measured water concentrations of fluoxetine (0.1, 1.0, 8.0, 16, 32, 64 μg/L) to produce plasma concentrations below, equal and above the range of Human Therapeutic Plasma Concentrations (HTPCs). Fluoxetine and its metabolite, norfluoxetine, were quantified in the plasma of individual fish and linked to behavioural anxiety-related endpoints. The minimum drug plasma concentrations that elicited anxiolytic responses in fish were above the upper value of the HTPC range, whereas no effects were observed at plasma concentrations below the HTPCs. In vivo metabolism of fluoxetine in humans and fish was similar, and displayed bi-phasic concentration-dependent kinetics driven by the auto-inhibitory dynamics and saturation of the enzymes that convert fluoxetine into norfluoxetine. The sensitivity of fish to fluoxetine was not so dissimilar from that of patients affected by general anxiety disorders. These results represent the first direct evidence of measured internal dose response effect of a pharmaceutical in fish, hence validating the Read-Across hypothesis applied to fluoxetine. Overall, this study demonstrates that the qCSE approach, anchored to internal drug concentrations, is a powerful tool to guide the assessment of the sensitivity of fish to pharmaceuticals, and strengthens the translational power of the cross-species extrapolation

1994 CSRS Research Reports/1994 Blueberry Tax Reports

The 1994 edition of the CSRS Research Reports/Blueberry Tax Reports was prepared for the Maine Wild Blueberry Commission and the University of Maine Wild Blueberry Advisory Committee by researchers at the University of Maine, Orono. Projects in this report include: CSRS Research Reports 1. Potential Uses for Green and Red Cull Blueberries 2. Preventing the Bleeding of Blueberry Fruit in Bakery Products 3. The Effect of Fertilization and Irrigation on Blueberry Fruit Quality 4. Determination of Pesticide Residue Levels in Freshly Harvested and Processed Lowbush Blueberries 5. The Effect of Mechanical Harvesting on Blueberry Fruit Quality 6. Removing Water from Blueberries Before Freezing 7. Application of Heat as a Method of Controlling Secondary Pest Insects in Lowbush Blueberries 8. Evaluation of Effectiveness of Eumenid Wasps for Biocontrol of Blueberry Pests 9. Pollination Ecology of Lowbush Blueberry in Maine 10. Fungicide Treatment for Control of Monilinia Blight 11. Field Sanitation for Control of Monilinia Blight 12. Cold-hardiness of Native Lowbush Blueberry 13. Phosphorus Dose/Response Curve 14. Multiple Cropping of Wild Blueberry Stands 15. Effect of Soil pH on Nutrient Uptake 16. Effect of Boron and Calcium on Lowbush Blueberry Fruit Set and Yield 17. Effect of Time of Fall Pruning on Growth and Productivity of Lowbush Blueberries 18. A Reinvestigation of the Economics of Mechanical Harvesting 19. Thresholds of Mechanical and Chemical Weed Controls in Wild Blueberries 20. Evaluation of Pressurized Rope Wick Master Wiper for Treating Weeds Growing Above Lowbush Blueberries 21. Evaluation of Infrared Burner for Selective Weed Control Blueberry Tax Reports 22. Control of Blueberry Pest Insects 23. Biology and Action Thresholds of Secondary Blueberry Pest Insects 24. Pollination Ecology of Low bush Blueberry in Maine 25. Nitrogen-Phosphorus Study 26. Evaluation of Pronone 10G for Control of Weeds in Lowbush Blueberries 27. Evaluation of Tribenuron Methyl for Bunchberry Control 28. Evaluation of Pendimethalin for Control of Annual Grasses in Lowbush Blueberries 29. Evaluation of Time of Application of Clopyralid for Control of Vetch, and Effect on Flowering of Lowbush Blueberries 30. Hexazinone Ground Water survey 31. Blueberry Extension Program Base 32. Blueberry ICM Program for Hancock Count

A versatile panel of reference gene assays for the measurement of chicken mRNA by quantitative PCR

Quantitative real-time PCR assays are widely used for the quantification of mRNA within avian experimental samples. Multiple stably-expressed reference genes, selected for the lowest variation in representative samples, can be used to control random technical variation. Reference gene assays must be reliable, have high amplification specificity and efficiency, and not produce signals from contaminating DNA. Whilst recent research papers identify specific genes that are stable in particular tissues and experimental treatments, here we describe a panel of ten avian gene primer and probe sets that can be used to identify suitable reference genes in many experimental contexts. The panel was tested with TaqMan and SYBR Green systems in two experimental scenarios: a tissue collection and virus infection of cultured fibroblasts. GeNorm and NormFinder algorithms were able to select appropriate reference gene sets in each case. We show the effects of using the selected genes on the detection of statistically significant differences in expression. The results are compared with those obtained using 28s ribosomal RNA, the present most widely accepted reference gene in chicken work, identifying circumstances where its use might provide misleading results. Methods for eliminating DNA contamination of RNA reduced, but did not completely remove, detectable DNA. We therefore attached special importance to testing each qPCR assay for absence of signal using DNA template. The assays and analyses developed here provide a useful resource for selecting reference genes for investigations of avian biology

PatternLab for proteomics: a tool for differential shotgun proteomics

<p>Abstract</p> <p>Background</p> <p>A goal of proteomics is to distinguish between states of a biological system by identifying protein expression differences. Liu <it>et al</it>. demonstrated a method to perform semi-relative protein quantitation in shotgun proteomics data by correlating the number of tandem mass spectra obtained for each protein, or "spectral count", with its abundance in a mixture; however, two issues have remained open: how to normalize spectral counting data and how to efficiently pinpoint differences between profiles. Moreover, Chen <it>et al</it>. recently showed how to increase the number of identified proteins in shotgun proteomics by analyzing samples with different MS-compatible detergents while performing proteolytic digestion. The latter introduced new challenges as seen from the data analysis perspective, since replicate readings are not acquired.</p> <p>Results</p> <p>To address the open issues above, we present a program termed PatternLab for proteomics. This program implements existing strategies and adds two new methods to pinpoint differences in protein profiles. The first method, ACFold, addresses experiments with less than three replicates from each state or having assays acquired by different protocols as described by Chen <it>et al</it>. ACFold uses a combined criterion based on expression fold changes, the AC test, and the false-discovery rate, and can supply a "bird's-eye view" of differentially expressed proteins. The other method addresses experimental designs having multiple readings from each state and is referred to as nSVM (natural support vector machine) because of its roots in evolutionary computing and in statistical learning theory. Our observations suggest that nSVM's niche comprises projects that select a minimum set of proteins for classification purposes; for example, the development of an early detection kit for a given pathology. We demonstrate the effectiveness of each method on experimental data and confront them with existing strategies.</p> <p>Conclusion</p> <p>PatternLab offers an easy and unified access to a variety of feature selection and normalization strategies, each having its own niche. Additionally, graphing tools are available to aid in the analysis of high throughput experimental data. PatternLab is available at <url>http://pcarvalho.com/patternlab</url>.</p