Sequence analysis of the cupin gene family in Synechocystis PCC6803

The recently described cupin superfamily of proteins includes the germin and germinlike proteins, of which the cereal oxalate oxidase is the best characterized. This superfamily also includes seed storage proteins, in addition to several microbial enzymes and proteins with unknown function. All these proteins are characterized by the conservation of two central motifs, usually containing two or three histidine residues presumed to be involved with metal binding in the catalytic active site. The present study on the coding regions of Synechocystis PCC6803 identifies a previously unknown group of 12 related cupins, each containing the characteristic two-motif signature. This group comprises 11 single-domain proteins, ranging in length from 104 to 289 residues, and includes two phosphomannose isomerases and two epimerases involved in cell wall synthesis, a member of the pirin group of nuclear proteins, a possible transcriptional regulator, and a close relative-of a cytochrome c551 from Rhodococcus. Additionally, there is a duplicated, two-domain protein that has close similarity to an oxalate decarboxylase from the fungus Collybia velutipes and that is a putative progenitor of the storage proteins of land plants

Reconstruction of subgrid scale topographic variability and its effect upon the spatial structure of three dimensional river flow

A new approach to describing the associated topography at different scales in computational fluid dynamic applications to gravel bed rivers was developed. Surveyed topographic data were interpolated, using geostatistical methods, into different spatial discretizations, and grain-size data were used with fractal methods to reconstruct the microtopography at scales finer than the measurement (subgrid) scale. The combination of both scales of topography was then used to construct the spatial discretization of a three-dimensional finite volume Computational Fluid Dynamics (CFD) scheme where the topography was included using a mass flux scaling approach. The method was applied and tested on a 15 m stretch of Solfatara Creek, Wyoming, United States, using spatially distributed elevation and grain-size data. Model runs were undertaken for each topography using a steady state solution. This paper evaluates the impact of the model spatial discretization and additional reconstructed-variability upon the spatial structure of predicted three-dimensional flow. The paper shows how microtopography modifies the spatial structure of predicted flow at scales finer than measurement scale in terms of variability whereas the characteristic scale of predicted flow is determined by the CFD scale. Changes in microtopography modify the predicted mean velocity value by 3.6% for a mesh resolution of 5 cm whereas a change in the computational scale modifies model results by 60%. The paper also points out how the spatial variability of predicted velocities is determined by the topographic complexity at different scales of the input topographic model

The Green, Green Grass of Home: an archaeo-ecological approach to pastoralist settlement in central Kenya

© 2016 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. This paper considers the ecological residues of pastoralist occupation at the site of Maili Sita in Laikipia, central Kenya, drawing links with the archaeological record so as to contribute a fresh approach to the ephemeral settlement sites of mobile herding communities, a methodological aspect of African archaeology that remains problematic. Variations in the geochemical and micromorphological composition of soils along transects across the site are compared with vegetation distributions and satellite imagery to propose an occupation pattern not dissimilar to contemporary Cushitic-speaking groups further north. We argue that Maili Sita exemplifies the broad migratory and cultural exchange networks in place during the mid- to late second millennium AD, with pastoralist occupants who were both physically and culturally mobile.British Academy (2002-5 Funding) European Union - Marie Curie Initiatives (EXT grant 2007-11

Equivariant cohomology over Lie groupoids and Lie-Rinehart algebras

Using the language and terminology of relative homological algebra, in particular that of derived functors, we introduce equivariant cohomology over a general Lie-Rinehart algebra and equivariant de Rham cohomology over a locally trivial Lie groupoid in terms of suitably defined monads (also known as triples) and the associated standard constructions. This extends a characterization of equivariant de Rham cohomology in terms of derived functors developed earlier for the special case where the Lie groupoid is an ordinary Lie group, viewed as a Lie groupoid with a single object; in that theory over a Lie group, the ordinary Bott-Dupont-Shulman-Stasheff complex arises as an a posteriori object. We prove that, given a locally trivial Lie groupoid G and a smooth G-manifold f over the space B of objects of G, the resulting G-equivariant de Rham theory of f boils down to the ordinary equivariant de Rham theory of a vertex manifold relative to the corresponding vertex group, for any vertex in the space B of objects of G; this implies that the equivariant de Rham cohomology introduced here coincides with the stack de Rham cohomology of the associated transformation groupoid whence this stack de Rham cohomology can be characterized as a relative derived functor. We introduce a notion of cone on a Lie-Rinehart algebra and in particular that of cone on a Lie algebroid. This cone is an indispensable tool for the description of the requisite monads.Comment: 47 page

Franz cell diffusion testing and quantitative confocal raman spectroscopy: In vitro-in vivo correlation

Previously, we reported the use of Confocal Raman Spectroscopy (CRS) to investigate the topical delivery of actives and excipients. We have also correlated the results from CRS with findings from in vitro diffusion studies in human skin. However, until now CRS has only been used as a semi-quantitative method of determining the skin uptake of molecules, with results expressed as arbitrary units of signal intensity. Clearly, this posed challenges for using CRS to determine skin delivery and to assess the drug bioavailability and bioequivalence of topical formulations. In the present work, the permeation of niacinamide (NIA) from various formulations in human skin was studied in vitro using conventional Franz cells and in vivo using a quantitative CRS m

What do young athletes implicitly understand about psychological skills?

One reason sport psychologists teach psychological skills is to enhance performance in sport; but the value of psychological skills for young athletes is questionable because of the qualitative and quantitative differences between children and adults in their understanding of abstract concepts such as mental skills. To teach these skills effectively to young athletes, sport psychologists need to appreciate what young athletes implicitly understand about such skills because maturational (e.g., cognitive, social) and environmental (e.g., coaches) factors can influence the progressive development of children and youth. In the present qualitative study, we explored young athletes’ (aged 10–15 years) understanding of four basic psychological skills: goal setting, mental imagery, self-talk, and relaxation. Young athletes (n = 118: 75 males and 43 females) completed an open-ended questionnaire to report their understanding of these four basic psychological skills. Compared with the older youth athletes, the younger youth athletes were less able to explain the meaning of each psychological skill. Goal setting and mental imagery were better understood than self-talk and relaxation. Based on these findings, sport psychologists should consider adapting interventions and psychoeducational programs to match young athletes’ age and developmental level

ERP and four dimensions of absorptive capacity: lessons from a developing country

Enterprise resource planning systems can grant crucial strategic, operational and information-based benefits to adopting firms when implemented successfully. However, a failed implementation can often result in financial losses rather than profits. Until now, the research on the failures and successes were focused on implementations in large manufacturing and service organizations firms located in western countries, particularly in USA. Nevertheless, IT has gained intense diffusion to developing countries through declining hardware costs and increasing benefits that merits attention as much as developed countries. The aim of this study is to examine the implications of knowledge transfer in a developing country, Turkey, as a paradigm in the knowledge society with a focus on the implementation activities that foster successful installations. We suggest that absorptive capacity is an important characteristic of a firm that explains the success level of such a knowledge transfer.Publicad

Construction of a doxycycline inducible adipogenic lentiviral expression system

To provide a tool for research on regulating adipocyte differentiation, tetracycline inducible (Tet on) lentiviral expression vectors under the control of an adipose-specific promoter were constructed. The lowest basal expression in the absence of doxycycline and most efficient dose-dependent, doxycycline-induced transient overexpression was observed using vectors constructed with a combination of Tetracycline Responsive Element (TRE) and reverse tetracycline-controlled TransActivator advanced (rtTAadv), transfected in white (3T3-L1) and brown (HIB-1B) preadipocytes cell lines. The results demonstrate that doxycycline adipogenic inducible expression can be achieved using a pLenti TRE / rtTA adv under the control of the truncated aP2 promoter in HIB-1B preadipocytes

SOLITAIRE:A new generation solenoidal fusion product separator

A superconducting solenoidal fusion product separator, based on a 6.5 T solenoid, has been developed at the Australian National University to enable separation and detection of evaporation residues following heavy-ion fusion reactions. This device, with an angular coverage of 0.45 - 9 . 5{ring operator}, produces a spatial separation between the fusion products and the intense background of elastically scattered beam particles. Its high efficiency allows precise measurement of nuclear fusion cross-sections, as well as being ideal for evaporation residue coincidence measurements. The essential features of the system and the first results obtained are described