Molecular structure and developmental expression of zebrafish atp2a genes

[[abstract]]We isolated two atp2a genes, atp2a1 and atp2a2a, from embryonic zebrafish. Amino acid sequences deduced from zebrafish atp2a genes are aligned with orthologue proteins from other species, the results showed that they share high percentage of identities (82%–94%) and acidic pIs (5.03–5.33). Whole mount in situ hybridization experiments showed that atp2a1 and atp2a2a are maternal inherited genes which can be detected at 1-cell stage embryos and express in the entire animal pole from 6 hours post-fertilization (hpf) to 12 hpf. At the later stages (48–96 hpf), expression of atp2a1 was restricted in head and trunk muscles as well as in some neurons. In contrast to the strongly expression of atp2a1 in head muscle, expression of atp2a2a was detected in head muscle in a fainter manner. In addition, transcripts of atp2a2a were observed in the developing heart during early cardiogenesis. The present studies not only help us to comparatively analyze atp2a genes across species, but also provide useful information about expressions during early embryogenesis that will help in further investigations of functional studies of Atp2a in the future.[[incitationindex]]SCI[[booktype]]紙

NEOTROPICAL XENARTHRANS: a data set of occurrence of xenarthran species in the Neotropics

Xenarthrans – anteaters, sloths, and armadillos – have essential functions for ecosystem maintenance, such as insect control and nutrient cycling, playing key roles as ecosystem engineers. Because of habitat loss and fragmentation, hunting pressure, and conflicts with 24 domestic dogs, these species have been threatened locally, regionally, or even across their full distribution ranges. The Neotropics harbor 21 species of armadillos, ten anteaters, and six sloths. Our dataset includes the families Chlamyphoridae (13), Dasypodidae (7), Myrmecophagidae (3), Bradypodidae (4), and Megalonychidae (2). We have no occurrence data on Dasypus pilosus (Dasypodidae). Regarding Cyclopedidae, until recently, only one species was recognized, but new genetic studies have revealed that the group is represented by seven species. In this data-paper, we compiled a total of 42,528 records of 31 species, represented by occurrence and quantitative data, totaling 24,847 unique georeferenced records. The geographic range is from the south of the USA, Mexico, and Caribbean countries at the northern portion of the Neotropics, to its austral distribution in Argentina, Paraguay, Chile, and Uruguay. Regarding anteaters, Myrmecophaga tridactyla has the most records (n=5,941), and Cyclopes sp. has the fewest (n=240). The armadillo species with the most data is Dasypus novemcinctus (n=11,588), and the least recorded for Calyptophractus retusus (n=33). With regards to sloth species, Bradypus variegatus has the most records (n=962), and Bradypus pygmaeus has the fewest (n=12). Our main objective with Neotropical Xenarthrans is to make occurrence and quantitative data available to facilitate more ecological research, particularly if we integrate the xenarthran data with other datasets of Neotropical Series which will become available very soon (i.e. Neotropical Carnivores, Neotropical Invasive Mammals, and Neotropical Hunters and Dogs). Therefore, studies on trophic cascades, hunting pressure, habitat loss, fragmentation effects, species invasion, and climate change effects will be possible with the Neotropical Xenarthrans dataset

Pervasive gaps in Amazonian ecological research

Biodiversity loss is one of the main challenges of our time, and attempts to address it require a clear understanding of how ecological communities respond to environmental change across time and space. While the increasing availability of global databases on ecological communities has advanced our knowledge of biodiversity sensitivity to environmental changes, vast areas of the tropics remain understudied. In the American tropics, Amazonia stands out as the world's most diverse rainforest and the primary source of Neotropical biodiversity, but it remains among the least known forests in America and is often underrepresented in biodiversity databases. To worsen this situation, human-induced modifications may eliminate pieces of the Amazon's biodiversity puzzle before we can use them to understand how ecological communities are responding. To increase generalization and applicability of biodiversity knowledge, it is thus crucial to reduce biases in ecological research, particularly in regions projected to face the most pronounced environmental changes. We integrate ecological community metadata of 7,694 sampling sites for multiple organism groups in a machine learning model framework to map the research probability across the Brazilian Amazonia, while identifying the region's vulnerability to environmental change. 15%–18% of the most neglected areas in ecological research are expected to experience severe climate or land use changes by 2050. This means that unless we take immediate action, we will not be able to establish their current status, much less monitor how it is changing and what is being lost

Quinolinate-induced Rat Striatal Excitotoxicity Impairs Endoplasmic Reticulum Ca2+-atpase Function

Excessive activation of NMDA glutamate receptors and the resulting loss of intracellular Ca2+ homeostasis may be lethal (excitotoxic) to neurons. Such excitotoxicity can be induced in vivo by intrastriatal infusion of quinolinate, as this substance selectively activates NMDA receptors. The aim of the present research was to investigate whether the in vivo treatment of striatal tissue with quinolinate would lead to an early impairment of sarco/endoplasmic reticulum Ca2+-ATPase (SERCA) activity or mitochondrial Ca2+ sequestration, two intracellular mechanisms involved in Ca2+ homeostasis and signaling. Sodium quinolinate was infused intrastriatally into adult rats, and 6 h later the brains were removed and the corpora striata dissected. At this time point, striatal sections stained with Fluoro-Jade, a cellular marker of cell death, showed initial signs of neuronal degeneration. In addition, SERCA activity decreased 39% in relation to the activity observed in the control striata. A corresponding decrease of the same magnitude in 45Ca2+ uptake by striatal microsomes was also found in the treated striata. Western blot analysis did not indicate any decrease in SERCA levels in striatal tissue after quinolinate infusion. Mitochondrial Ca2+ sequestration was still preserved in quinolinate-treated striatal tissue when the assay was carried out in the presence of physiological concentrations of ATP and Mg2+. These results suggest that impairment of the SERCA function may be an early event in excitotoxicity. © 2008 Springer Science+Business Media, LLC.33917491758Kostyuk, P., Verkhratsky, A., Calcium stores in neurons and glia (1994) Neuroscience, 63, pp. 381-404Malenka, R.C., Nicoll, R.A., Long-term potentiation-a decade of progress? 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Autohydrolysis of Annona cherimola Mill. seeds: optimization, modeling and products characterization

Annona cherimola Mill. seeds are a residue of the industrial processing of this fruit, for which, presently, there is no industrial application. They have a considerable amount of oil, which can be converted into biodiesel, but the remaining lignocellulosic fraction still needs relevant added-value valorization routes. Inthis work,the selectivehemicelluloses removal by autohydrolysis was optimizedaiming tomaximize the yield of oligosaccharides with potential applications in food, pharmaceutical and cosmetic industries. A maximum of 10.4 g L−1 of oligosaccharides was obtained, for a severity factor of 3.6, where 74.5% of the original hemicellulose was solubilized. The process kinetics is presented, modeled (based on the Arrhenius equation) and its scale-up is dis cussed. The hydrolyzate shelf-life was evaluated and the produced oligosaccharides are stable at room temperature for, at least, 3 weeks. Furthermore, all oligosaccharides are also stable at 100 ◦C for 1 h, in pH values between 1 and 11, enabling their industrial processing, and at 37 ◦C for 3 h, in pH values between 1 and 3, thus indicating its potential classification as non-digestible oligosaccharides. The remaining cel lulose enriched solids presented an increased enzymatic digestibility (as a function of the autohydrolysis severity) that assures its efficient use in subsequent processes (e.g., bioethanol production). The upgrade route developed in this work in combination to the previously reported use of A. cherimola seed oil for biodiesel production can lead to an integrated zero-waste valorization strategy within the biorefinery framework.info:eu-repo/semantics/publishedVersio

Geografia social da AIDS no Brasil The social geography of AIDS in Brazil

São divulgados os primeiros resultados da avaliação da dinâmica da epidemia da AIDS no Brasil através de técnicas de análise da distribuição espacial. São revisadas questões metodológicas, apontando as dificuldades de estabelecer regiões geográficas homogêneas no Brasil. Descrevem-se tendências recentes da dinâmica da epidemia da AIDS no Brasil - pauperização, interiorização e alteração na participação proporcional das categorias de exposição. Avalia-se a distribuição de casos de AIDS por Unidades da Federação (UFs), confeccionando-se mapas relativos à disseminação da epidemia no período 1987-1993 nas diversas UFs, estabelecendo-se os Centros Gravimétricos (CGs) relativos a esses anos. A análise do posicionamento e deslocamento pluri-anual desses CGs indica a força atrativa do Estado de São Paulo como pólo de difusão da epidemia e uma expansão simultânea da epidemia em direção às fronteiras de ocupação. Essas tendências colocam dificuldades adicionais às atividades de prevenção ao acrescentarem novos segmentos populacionais e regiões geográficas ao quadro observado inicialmente nas principais regiões metropolitanas e segmentos mais afetados.<br>The first of a series of papers concerning the evaluation of the dynamics of the AIDS epidemic in Brazil employing techniques of geographical analysis, is here presented. Results of research undertaken in the US (especially in New York City) are compared with those of a recent investigation carried out in the city of S.Paulo, Brazil (Grangeiro, 1994). In both, geographical patterns of socio-demographic variables correlate with different patterns of the spread of the AIDS epidemic through the transmission groups. Recent trends of the AIDS epidemic in Brazil: the displacement toward medium sized cities and expansion frontiers, increasing report of AIDS cases among the poor and underprivileged, changes in the pattern of transmission with proportional augmentation of heterosexual transmission and IDUs as transmission groups, are described and analised. The geographical distribution of the AIDS cases registered between 1987-1993 in Brazil throughout the Brazilian States is evaluated by means of worksheets, maps, and non-parametric statistics. Results show that Gravimetric Centers (obtained by the use of the calculus spatial means) of AIDS in Brazil are situated within a triangle the sides of which are formed lines joining the three main metropolitan areas of the wealthiest region of Brazil - the southeast, i.e. São Paulo, Rio de Janeiro and Belo Horizonte. These especially S. Paulo, function as points of attraction for these Gravimetric Centers (GCs) towards the south as compared with the GCs of the general population calculated ia accordance with data from the 1980 and 1991 censuses. It is possible to observe a displacement of the GCs toward the northwest over this period in accordance with the migration patterns of the Brazilian population in general, though with a dynamic of its own. These changes in the geographical, socio-demographic and transmission group patterns show the complex nature of the epidemic in Brazil and pose additional difficulties for the development of prevention strategies

Zooarqueologia dos mamíferos aquáticos e semi-aquáticos da Ilha de Santa Catarina, sul do Brasil

<abstract language="eng">This study analyzes the use of aquatic mammals by prehistoric societies of Santa Catarina Island, Southern Brazil. Samples from two archaeological sites were examined: Rio do Meio (RM) and Porto do Rio Vermelho (SCPRV). Nine aquatic mammal species were found: a) pinnipeds: Arctocephalus australis (Zimmerman, 1783) and A. tropicalis (Gray, 1872), and b) cetaceans: Eubalaena australis (Desmoulins, 1822), Delphinus delphis Linnaeus, 1758, Stenella frontalis (Cuvier, 1829), Steno bredanensis (Lesson, 1828), Tursiops truncatus (Montagu, 1821), Pontoporia blainvillei (Gervais & d'Orbigny, 1844) and a non-identified rorqual from the genus Balaenoptera Lacépède, 1804. Three especies of semi-aquatic mammals were also recorded: Hydrochoerus hydrochaeris (Linnaeus, 1758), Tapirus terrestris (Linnaeus, 1758) and Lontra longicaudis (Olfers,1818). Both sites presented similar species diversity, although abundance was greater at the most recent site (RM). There were more samples from axial skeletons, but in genera the anatomical regions were homogeneously distributed among the identified taxa