Nestedness in mutualistic networks

James et al. (2012) presented simulations that apparently falsify the analytical result by Bastolla et al. (2009), who showed that nested mutualistic interactions decrease interspecific competition and increase biodiversity in model ecosystems. This contradiction, however, mainly stems from the incorrect application of formulas derived for fully connected networks to empirical, sparse networks.Comment: 2 pages, 1 figur

Macroporous materials: microfluidic fabrication, functionalization and applications

This article provides an up-to-date highly comprehensive overview (594 references) on the state of the art of the synthesis and design of macroporous materials using microfluidics and their applications in different fields

Flow injection determination of total catechins and procyanidins in white and red wines

An easily automatable flow-injection (FI) method for the determination of total catechins is reported. The method is based on the reaction of vanillin in acid medium to yield a coloured product with maximum absorption at 500 nm. After optimisation by the univariate and multivariate approaches as required, the linear range was established (between 10 and 90 mgL-1 and 10 and 250 mgL-1 for white and red wines, respectively). Then, the assessment of the proposed versus the reference method was studied in terms of repeatability (2.57 mgL-1), reproducibility (3.56 mgL-1) (no significant differences were found), detection and quantification limits (not far from those of the reference method and always sufficient for the determination of catechins in any type of wine), traceability (excellent correlation under all conditions) and sample throughput (23 samples h-1 for the proposed method versus 3 samples h-1 for the reference method)

Detailed study of SNR G306.3-0.9 using XMM-Newton and Chandra observations

We used combined data from XMM-Newton and Chandra observatories to study the X-ray morphology of SNR G306.3-0.9. A spatially-resolved spectral analysis was used to obtain physical and geometrical parameters of different regions of the remnant. Spitzer infrared observations were also used to constrain the progenitor supernova and study the environment in which the SNR evolved. The X-ray morphology of the remnant displays a non-uniform structure of semi-circular appearance, with a bright southwest region and very weak or almost negligible X-ray emission in its northern part. These results indicate that the remnant is propagating in a non-uniform environment as the shock fronts are encountering a high-density medium, where enhanced infrared emission is detected. The X-ray spectral analysis of the selected regions shows distinct emission-line features of several metal elements, confirming the thermal origin of the emission. The X-ray spectra are well represented by a combination of two absorbed thermal plasma models: one in equilibrium ionization with a mean temperature of ~0.19 keV, and another out of equilibrium ionization at a higher temperature of ~1.1 or 1.6-1.9 keV. For regions located in the northeast, central, and southwest part of the SNR, we found elevated abundances of Si, S, Ar, Ca, and Fe, typical of ejecta material. The outer regions located northwest and south show values of the abundances above solar but lower than to those found in the central regions. This suggests that the composition of the emitting outer parts of the SNR is a combination of ejecta and shocked material of the interstellar medium. The comparison between the S/Si, Ar/Si, and Ca/Si abundances ratios (1.75, 1.27, and 2.72 in the central region, respectively), favor a Type Ia progenitor for this SNR, a result that is also supported by an independent morphological analysis using X-ray and IR data.Comment: 8 pages, 7 figures. Accepted by Astronomy and Astrophysic

H-alpha observations of the gamma-ray-emitting Be/X-ray binary LSI+61303: orbital modulation, disk truncation, and long-term variability

We report 138 spectral observations of the H-alpha emission line of the radio- and gamma-ray-emitting Be/X-ray binary LSI+61303 obtained during the period of September 1998 -- January 2013. From measuring various H-alpha parameters, we found that the orbital modulation of the H-alpha is best visible in the equivalent width ratio EW(B)/EW(R), the equivalent width of the blue hump, and in the radial velocity of the central dip. The periodogram analysis confirmed that the H-alpha emission is modulated with the orbital and superorbital periods. For the past 20 years the radius of the circumstellar disk is similar to the Roche lobe size at the periastron. It is probably truncated by a 6:1 resonance. The orbital maximum of the equivalent width of H-alpha emission peaks after the periastron and coincides on average with the X-ray and gamma-ray maxima. All the spectra are available upon request from the authors and through the CDS.Comment: 11 pages, accepted for publication in A&

Cyanate Assimilation by the Alkaliphilic Cyanide-Degrading Bacterium Pseudomonas pseudoalcaligenes CECT5344: Mutational Analysis of the cyn Gene Cluster

The alkaliphilic bacterium Pseudomonas pseudoalcaligenes CECT5344 can grow with cyanate, cyanide, or cyanide-containing industrial residues as the sole nitrogen source, but the assimilation of cyanide and cyanate takes place through independent pathways. Therefore, cyanide degradation involves a chemical reaction between cyanide and oxaloacetate to form a nitrile that is hydrolyzed to ammonium by the nitrilase NitC, whereas cyanate assimilation requires a cyanase that catalyzes cyanate decomposition to ammonium and carbon dioxide. The P. pseudoalcaligenes CECT5344 cynFABDS gene cluster codes for the putative transcriptional regulator CynF, the ABC-type cyanate transporter CynABD, and the cyanase CynS. In this study, transcriptional analysis revealed that the structural cynABDS genes constitute a single transcriptional unit, which was induced by cyanate and repressed by ammonium. Mutational characterization of the cyn genes indicated that CynF was essential for cynABDS gene expression and that nitrate/nitrite transporters may be involved in cyanate uptake, in addition to the CynABD transport system. Biodegradation of hazardous jewelry wastewater containing high amounts of cyanide and metals was achieved in a batch reactor operating at an alkaline pH after chemical treatment with hydrogen peroxide to oxidize cyanide to cyanate

Flow injection determination of readily assimilable nitrogen compounds during vinification

A flow injection method for the determination of readily assimilable nitrogen (r.a.n.), i.e. ammonium and aminated nitrogen, is reported. The difference in pH of the sample in the presence and absence of formaldehyde, which blocks the amino function, provides the value of r.a.n. by monitoring the changes in absorbance of bromothymol blue at 616 nm. The detection and quantification limits are 10 and 11.6 mg l-1, respectively; the reproducibility and repeatability are 3.94 mg l-1 and 1.35 mg l-1, respectively; and the sample throughput is 20 samples h-1. The method has been applied to the analysis of 120 samples of must and wine subjected to biological aging. The proposed method also provides good correlation with the reference method used in routine analysis, and it is faster and gives sufficient precision for wineries requirements

The Visibility Graph: a new method for estimating the Hurst exponent of fractional Brownian motion

Fractional Brownian motion (fBm) has been used as a theoretical framework to study real time series appearing in diverse scientific fields. Because its intrinsic non-stationarity and long range dependence, its characterization via the Hurst parameter H requires sophisticated techniques that often yield ambiguous results. In this work we show that fBm series map into a scale free visibility graph whose degree distribution is a function of H. Concretely, it is shown that the exponent of the power law degree distribution depends linearly on H. This also applies to fractional Gaussian noises (fGn) and generic f^(-b) noises. Taking advantage of these facts, we propose a brand new methodology to quantify long range dependence in these series. Its reliability is confirmed with extensive numerical simulations and analytical developments. Finally, we illustrate this method quantifying the persistent behavior of human gait dynamics.Comment: 5 pages, submitted for publicatio

Highest weight Macdonald and Jack Polynomials

Fractional quantum Hall states of particles in the lowest Landau levels are described by multivariate polynomials. The incompressible liquid states when described on a sphere are fully invariant under the rotation group. Excited quasiparticle/quasihole states are member of multiplets under the rotation group and generically there is a nontrivial highest weight member of the multiplet from which all states can be constructed. Some of the trial states proposed in the literature belong to classical families of symmetric polynomials. In this paper we study Macdonald and Jack polynomials that are highest weight states. For Macdonald polynomials it is a (q,t)-deformation of the raising angular momentum operator that defines the highest weight condition. By specialization of the parameters we obtain a classification of the highest weight Jack polynomials. Our results are valid in the case of staircase and rectangular partition indexing the polynomials.Comment: 17 pages, published versio

A radio and infrared exploration of the Cygnus X-3 environments

To confirm, or rule out, the possible hot spot nature of two previously detected radio sources in the vicinity of the Cygnus X-3 microquasar. We present the results of a radio and near infrared exploration of the several arc-minute field around the well known galactic relativistic jet source Cygnus X-3 using the Very Large Array and the Calar Alto 3.5~m telescope. The data this paper is based on do not presently support the hot spot hypothesis. Instead, our new observations suggest that these sources are most likely background or foreground objects. Actually, none of them appears to be even barely extended as would be expected if they were part of a bow shock structure. Our near infrared observations also include a search for extended emission in the Bracket $\gamma$ (2.166 $\mu$m) and $H_{2}$ (2.122 $\mu$m) lines as possible tracers of shocked gas in the Cygnus X-3 surroundings. The results were similarly negative and the corresponding upper limits are reported.Comment: Accepted for publication in A&A; 5 pages, 4 figure