44 research outputs found

    Synthesis of mesoporous MCM-41 materials with low power microwave heating

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    Crystalline, high surface area, hexagonal mesoporous MCM-41 having uniform pore sizes and good thermal stability was successfully synthesized at 90-120oC in 30 minutes using low power microwave irradiation. This appears to be the first comprehensive and quantitative investigation of the comparatively rapid synthesis of mesoporous MCM-41 using low power microwave heating of 80W (90oC) and 120W (120oC). The influence of reaction temperature and the duration of heating were carefully investigated and the calcined MCM-41 materials were characterized by XRD, SEM, TEM, nitrogen adsorption, TGA and FTIR. The mesoporous MCM-41 product synthesized in 30 minutes at 120W and calcined at 550oC had a very high surface area of 1438 m2/g and was highly ordered, contained uniform pores with diameters in the range of 3.5-4.5 nm. The wall thickness of the materials highly depended on the power of the microwave energy used during the synthesis. Synthesis of the mesoporous MCM-41 products at 120oC resulted with a structure having thinner walls. The mesoporous MCM-41 materials synthesized in the present work had good thermal stability

    Biogasification and combustion reactions of Turkish lignites: adsorption behavior and biogasification of Soma lignite and co-combustion of Beypazari lignite with biomass

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    In this study, our primary objective is to understand CBM capacity of the Soma coal basin. For this reason, porosity of the coal samples must be determined. Usually, surface area and the porosity of the materials can be calculated through the N2 physical sorption experiment, in this method entire relative pressure range (10-8 to 1) can be analyzed without using high pressure equipments. However, for microporous materials like carbon materials and zeolites physical sorption occurs at very low relative pressure ranges (10-8 to 10-3) and experiments that are conducted with N2 are less reliable due to the low diffusion rate and adsorption equilibrium in the pores between 0,5 to 1 nm at 77 K. It is also known that specifically for carbon materials experiments that are conducted at low temperatures such as N2 sorption causes pore shrinkage that leads to the low sorption equilibrium

    How a Vicinal Layer of Solvent Modulates the Dynamics of Proteins

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    The dynamics of a folded protein is studied in water and glycerol at a series of temperatures below and above their respective dynamical transition. The system is modeled in two distinct states whereby the protein is decoupled from the bulk solvent at low temperatures, and communicates with it through a vicinal layer at physiological temperatures. A linear viscoelastic model elucidates the less-than-expected increase in the relaxation times observed in the backbone dynamics of the protein. The model further explains the increase in the flexibility of the protein once the transition takes place and the differences in the flexibility under the different solvent environments. Coupling between the vicinal layer and the protein fluctuations is necessary to interpret these observations. The vicinal layer is postulated to form once a threshold for the volumetric fluctuations in the protein to accommodate solvents of different sizes is reached. Compensation of entropic-energetic contributions from the protein-coupled vicinal layer quantifies the scaling of the dynamical transition temperatures in various solvents. The protein adapts different conformational routes for organizing the required coupling to a specific solvent, which is achieved by adjusting the amount of conformational jumps in the surface-group dihedrals

    Ultrasonography-Guided Injection for Quadriceps Fat Pad Edema: Preliminary Report of a Six-Month Clinical and Radiological Follow-Up

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    Purpose: To investigate efficacy and safety of ultrasonography-guided local corticosteroid and anesthetic injection followed by physical therapy for the management of quadriceps fat pad (QFP) edema. Materials and Methods: We prospectively evaluated 1671 knee MRI examinations in 1542 patients for QFP edema with mass effect, which was present in 109 (6.5%) knees. Participants were assigned into injection and therapy groups (both received the same physical therapy program). Injection group was first treated with ultrasonography-guided QFP injection of 1 mL corticosteroid and 1 mL local anesthetic agent. Patients were evaluated at baseline and 1-, 2-, 6-month follow-up for pain using static and dynamic visual analogue scale (VAS), suprapatellar tenderness, and QFP edema on MRI. Results: Final sample size consisted of 19 knees (injection group, 10; therapy group, 9) in 17 patients. An overall improvement was detected in both groups between baseline and final assessments. The injection group fared better than the therapy group in static VAS scores (3.33 ± 1.70 versus 0.56 ± 1.33), while there was no such difference for dynamic VAS. Incidence of suprapatellar tenderness decreased in both groups, statistically significantly in the injection group (from 100% to 0%). Pain reduction was greater in the injection group at the first month (88.9% – 90% good response versus 50% – 66.7% good response, static-dynamic VAS scoring, respectively), whereas there was no such superiority at the sixth month. No severe adverse events were identified. Conclusion: Ultrasonography-guided local injection followed by physical therapy is safe in the management of QFP edema; however, it is not superior to stand-alone physical therapy program in the long term

    Comparison of culture media indicates a role for autologous serum in enhancing phenotypic preservation of rabbit limbal stem cells in explant culture

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    WOS: 000427591500018PubMed ID: 29204944In this study, we aimed to compare the effects of six different cell culture media and autologous serum (AS) on the phenotypic characteristics of rabbit limbal epithelial stem cells (LESC) cultivated on porous polyethylene terephthalate (PET) membranes. Limbal explants from rabbit corneas were grown on PET membrane inserts in five different media: DMEM-F12 with fetal bovine serum (FBS) (DMEM-F12-FBS), with pluripotin (DMEM-F12-pluripotin) and with autologous serum (DMEM-F12-AS), Epilife, Keratinocyte Serum Free Medium (KSFM) and Defined-Keratinocyte Serum Free Medium. The effects of different media were evaluated by total cell yield from explants, measuring the expression of proteins by immunofluorescence and gene expression by Real Time PCR. In all five media tested, most of the limbal epithelial cells (LEC) which proliferated from explants were positive for cytokeratin (CK) 14 (85-90%), indicating that all five media support the growth of LESC from explants. The expression of differentiation markers; CK 3 and 12 was highest in DMEM-F12-FBS (56%), was lower in Epilife and KSFM (26 and 19%, respectively), with the lowest values (13%) obtained in DMEM-F12-AS. Gene expression of limbal cultures on PET membrane inserts was compared to fresh limbal tissue. In DMEM-F12-FBS, DMEM-F12-pluripotin, and DMEM-F12-AS, expression of potential LESC markers CXCR4 and polycomb complex protein BMI-1 were similar to limbal tissue. DMEM-F12 with 10% AS maintained a higher percentage of potential stem cell marker genes and lower expression of genes involved in differentiation compared to Epilife or KSFM. Our study shows that rabbit LEC can be cultivated on PET inserts using DMEM-F12 with autologous serum without a requirement for amniotic membrane or feeder cells.Dokuz Eylul UniversityDokuz Eylul University [2013.KB.SAG.048]; Scientific and Technological Research Council of Turkey; TUBITAK 1001 Research Grant [111S414]This study was supported by funding from Dokuz Eylul University, Research Grant No. 2013.KB.SAG.048 (KB) and The Scientific and Technological Research Council of Turkey; TUBITAK 1001 Research Grant No. 111S414 (ID)

    An overview of biomolecules, immobilization methods and support materials of biosensors

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    ###EgeUn###Purpose Traditional analytical methods are often time-consuming and require bulky instruments, making their widespread implementation challenging. This paper aims to represent the principal concepts of biosensors as an introduction of this technology to readers and offers a comprehensive understanding of its functions. Design/methodology/approach The authors provide descriptions of the components, characteristics and advantages of biosensors along with the immobilization methods, followed by a brief discussion. Findings A biosensor is an analytical device comprising a specific biomolecule and a transducer in conjunction with an output system. The biomolecule recognizes a specific target which leads to a change in physicochemical properties of a system. This biorecognition phenomenon is later converted into a detectable signal by the transducer. Biosensors can essentially serve as rapid and cost-effective devices with excellent sensitivity and specificity for critical purposes in innumerable fields, ranging from scientific research to day-to-day applications. Originality/value Here, the authors explain and discuss the approaches and challenges with the aim of leading to an interest in biosensor development and improving their applications

    Development of a new needle trap-based method for the determination of some volatile organic compounds in the indoor environment

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    Volatile Organic Compounds (VOCs) are a large group of chemicals mostly found in indoor environments such as homes and workplaces. Long term exposure to certain VOCs can cause symptoms in some individuals and therefore, monitoring and controlling air quality can help better manage chronic respiratory diseases. In this study, we aimed to develop an easy-to-use, economical, in house needle trapbased methodology to detect certain VOCs to be used for public and occupational health. For this purpose, a multi-bed (packed with PDMS/Carbopack-X/Carboxen-1000) needle trap device (NTD) was utilized for sampling, enrichment, and injection of the VOCs into the gas chromatography. The performance of the developed method was investigated for the analysis of the group known as BTEX (benzene, toluene, ethylbenzene and xylene). Operational and instrumental parameters such as sampling flow rate and relative humidity, desorption time and temperature were optimized, and the analytical figures of merit of the proposed method have indicated that very low levels of BTEX in air samples can be easily determined by this new method. Overall results have shown that multi-bed NTD offers a high sensitive procedure for sampling and analysis of BTEX in concentration range of 0.002-0.298 mg/m(3) in indoor air. (C) 2021 Elsevier Ltd. All rights reserved.TUBITAK (Scientific and Technological Research Council of Turkey) [116S196]; Ege University Scientific Research Council [15-TIP-74]; Diagnosis, Monitoring, and Prevention of ExposureRelated Noncommunicable Diseases (DiMoPEx) EUCOST Action [CA15129]Ege University Translational Pulmonology Research Group [EgeTPAG] Study. This study is one of the spin-off projects of CA15129-Diagnosis, Monitoring, and Prevention of ExposureRelated Noncommunicable Diseases (DiMoPEx) EUCOST Action. Project is funded by TUBITAK (Scientific and Technological Research Council of Turkey) with project number 116S196 (Determination Of Molecular Asthma Endotypes By Exhaled Volatile Organic Compounds and Peripheral Blood Microrna Biomarkers [Voc/MirnaEndotip] Study) and by Ege University Scientific Research Council with project number 15-TIP-74

    Reproductive toxicity after levetiracetam administration in male rats: Evidence for role of hormonal status and oxidative stress.

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    Levetiracetam (LEV) is an antiepileptic drug commonly used in the treatment of epilepsy because of its excellent safety profile in all age groups. It is remarkable that there are no studies evaluating the toxic effects of this drug on the male reproductive system, as it is commonly used in male patients of reproductive age. From this point of view, our aim was to evaluate the possible toxic effects of LEV on the male reproductive system. Therefore, LEV was administered to male rats orally at 50, 150, and 300 mg/kg for 70 consecutive days. At the end of this period, alterations to body and organ weights were calculated, and sperm concentration, motility, and morphology were investigated by a computer-assisted sperm analysis system. Sperm DNA damage was determined by comet assay and histopathological examination of the testes was carried out. Serum testosterone, follicle-stimulating hormone (FSH), and luteinizing hormone (LH) levels were measured by ELISAs to determine the effects of hormonal status, while glutathione, superoxide dismutase, catalase, and malondialdehyde levels in the testes were measured by colorimetric assay kits to determine the role of oxidative status in potential toxicity. According to the results, sperm quality was decreased by LEV treatment in a dose-dependent manner. LEV induced significant DNA damage in the 150 and 300 mg/kg LEV-administered groups. Histopathology of the testes showed that LEV resulted in testicular injury in the 300 mg/kg LEV-administered group. Serum testosterone, FSH, and LH levels were significantly decreased in the 300 mg/kg LEV-administered group. Glutathione, superoxide dismutase, and catalase levels were significantly decreased in all experimental groups while malondialdehyde levels were significantly increased in 150 and 300 mg/kg LEV-administered groups. According to these results, it was determined that LEV administration decreased sperm quality and it was alleged that hormonal alteration and oxidative stress are potential contributors to reproductive toxicity

    A Recurrent Mutation in the ARS (Component B) Gene Encoding SLURP-1 in Turkish Families with Mal de Meleda: Evidence of a Founder Effect

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    6 páginas, 2 figuras.Mal de Meleda is a rare form of palmoplantar keratoderma, and recently mutations in the ARS (component) B gene have been identified in families with this disease. We identified a recurrent nonsense mutation, R96X, in four families of Turkish descent. In this report, we demonstrate that these families share a common ancestral haplotype at the mal de Meleda locus, suggesting a founder effect.This work was supported in part by the Dermatology Foundation (J.T.C.), the Waterbor Burn and Cancer Foundation (J.T.C.), the Irving Center for Clinical Research at Columbia University (J.T.C.), and USPHS NIH RO1AR44924 (A.M.C.).Peer reviewe

    Genital automatisms: Reappraisal of a remarkable but ignored symptom of focal seizures

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    Objectives: Genital automatisms (GAs) are uncommon clinical phenomena of focal seizures. They are defined as repeated fondling, grabbing, or scratching of the genitals. The aim of this study was to determine the lateralizing and localizing value and associated clinical characteristics of GAs
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