993 research outputs found
Sustainability and transparency in computational cognitive neuroscience
In this talk, I will discuss open science practices that aim to foster sustainability and transparency in computational cognitive neuroscience. First, I will review recent community efforts that aim to ease data sharing and analytical reproducibility, such as the reports of the OHBM Committees on Best Practice in Data Analysis and Sharing (COBIDAS) and the Brain Imaging Data Structures (BIDS). Second, I will discuss neuroimaging data sharing strategies in the light of ethical and legal constraints, such as the European General Data Protection Regulation (GDPR). Finally, I will discuss some common-sense guidelines for day-to-day research practice that aim to maximize the societal impact of computational cognitive neuroscience
Integrated research program in space nutrition Semiannual report, 1 Feb. - 31 Jul. 1970
Nutrition and breeding behavior of pocket mouse for space nutrition applicatio
Growth laws and self-similar growth regimes of coarsening two-dimensional foams: Transition from dry to wet limits
We study the topology and geometry of two dimensional coarsening foams with
arbitrary liquid fraction. To interpolate between the dry limit described by
von Neumann's law, and the wet limit described by Marqusee equation, the
relevant bubble characteristics are the Plateau border radius and a new
variable, the effective number of sides. We propose an equation for the
individual bubble growth rate as the weighted sum of the growth through
bubble-bubble interfaces and through bubble-Plateau borders interfaces. The
resulting prediction is successfully tested, without adjustable parameter,
using extensive bidimensional Potts model simulations. Simulations also show
that a selfsimilar growth regime is observed at any liquid fraction and
determine how the average size growth exponent, side number distribution and
relative size distribution interpolate between the extreme limits. Applications
include concentrated emulsions, grains in polycrystals and other domains with
coarsening driven by curvature
The stability of a crystal with diamond structure for patchy particles with tetrahedral symmetry
The phase diagram of model anisotropic particles with four attractive patches
in a tetrahedral arrangement has been computed at two different values for the
range of the potential, with the aim of investigating the conditions under
which a diamond crystal can be formed. We find that the diamond phase is never
stable for our longer-ranged potential. At low temperatures and pressures, the
fluid freezes into a body-centred-cubic solid that can be viewed as two
interpenetrating diamond lattices with a weak interaction between the two
sublattices. Upon compression, an orientationally ordered face-centred-cubic
crystal becomes more stable than the body-centred-cubic crystal, and at higher
temperatures a plastic face-centered-cubic phase is stabilized by the increased
entropy due to orientational disorder. A similar phase diagram is found for the
shorter-ranged potential, but at low temperatures and pressures, we also find a
region over which the diamond phase is thermodynamically favored over the
body-centred-cubic phase. The higher vibrational entropy of the diamond
structure with respect to the body-centred-cubic solid explains why it is
stable even though the enthalpy of the latter phase is lower. Some preliminary
studies on the growth of the diamond structure starting from a crystal seed
were performed. Even though the diamond phase is never thermodynamically stable
for the longer-ranged model, direct coexistence simulations of the interface
between the fluid and the body-centred-cubic crystal and between the fluid and
the diamond crystal show that, at sufficiently low pressures, it is quite
probable that in both cases the solid grows into a diamond crystal, albeit
involving some defects. These results highlight the importance of kinetic
effects in the formation of diamond crystals in systems of patchy particles.Comment: 15 pages, 13 figure
Nonlinear evolution of surface morphology in InAs/AlAs superlattices via surface diffusion
Continuum simulations of self-organized lateral compositional modulation
growth in InAs/AlAs short-period superlattices on InP substrate are presented.
Results of the simulations correspond quantitatively to the results of
synchrotron x-ray diffraction experiments. The time evolution of the
compositional modulation during epitaxial growth can be explained only
including a nonlinear dependence of the elastic energy of the growing epitaxial
layer on its thickness. From the fit of the experimental data to the growth
simulations we have determined the parameters of this nonlinear dependence. It
was found that the modulation amplitude don't depend on the values of the
surface diffusion constants of particular elements.Comment: 4 pages, 3 figures, published in Phys. Rev. Lett.
http://link.aps.org/abstract/PRL/v96/e13610
On the action potential as a propagating density pulse and the role of anesthetics
The Hodgkin-Huxley model of nerve pulse propagation relies on ion currents
through specific resistors called ion channels. We discuss a number of
classical thermodynamic findings on nerves that are not contained in this
classical theory. Particularly striking is the finding of reversible heat
changes, thickness and phase changes of the membrane during the action
potential. Data on various nerves rather suggest that a reversible density
pulse accompanies the action potential of nerves. Here, we attempted to explain
these phenomena by propagating solitons that depend on the presence of
cooperative phase transitions in the nerve membrane. These transitions are,
however, strongly influenced by the presence of anesthetics. Therefore, the
thermodynamic theory of nerve pulses suggests a explanation for the famous
Meyer-Overton rule that states that the critical anesthetic dose is linearly
related to the solubility of the drug in the membranes.Comment: 13 pages, 8 figure
A nonlinear theory of non-stationary low Mach number channel flows of freely cooling nearly elastic granular gases
We use hydrodynamics to investigate non-stationary channel flows of freely
cooling dilute granular gases. We focus on the regime where the sound travel
time through the channel is much shorter than the characteristic cooling time
of the gas. As a result, the gas pressure rapidly becomes almost homogeneous,
while the typical Mach number of the flow drops well below unity. Eliminating
the acoustic modes, we reduce the hydrodynamic equations to a single nonlinear
and nonlocal equation of a reaction-diffusion type in Lagrangian coordinates.
This equation describes a broad class of channel flows and, in particular, can
follow the development of the clustering instability from a weakly perturbed
homogeneous cooling state to strongly nonlinear states. If the heat diffusion
is neglected, the reduced equation is exactly soluble, and the solution
develops a finite-time density blowup. The heat diffusion, however, becomes
important near the attempted singularity. It arrests the density blowup and
brings about novel inhomogeneous cooling states (ICSs) of the gas, where the
pressure continues to decay with time, while the density profile becomes
time-independent. Both the density profile of an ICS, and the characteristic
relaxation time towards it are determined by a single dimensionless parameter
that describes the relative role of the inelastic energy loss and heat
diffusion. At large values of this parameter, the intermediate cooling dynamics
proceeds as a competition between low-density regions of the gas. This
competition resembles Ostwald ripening: only one hole survives at the end.Comment: 20 pages, 15 figures, final versio
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