Assessing Precision in Conventional Field Measurements of Individual Tree Attributes

Forest resource information has a hierarchical structure: individual tree attributes are summed at the plot level and then in turn, plot-level estimates are used to derive stand or large-area estimates of forest resources. Due to this hierarchy, it is imperative that individual tree attributes are measured with accuracy and precision. With the widespread use of different measurement tools, it is also important to understand the expected degree of precision associated with these measurements. The most prevalent tree attributes measured in the field are tree species, stem diameter-at-breast-height (dbh), and tree height. For dbh and height, the most commonly used measuring devices are calipers and clinometers, respectively. The aim of our study was to characterize the precision of individual tree dbh and height measurements in boreal forest conditions when using calipers and clinometers. The data consisted of 319 sample trees at a study area in Evo, southern Finland. The sample trees were measured independently by four trained mensurationists. The standard deviation in tree dbh and height measurements was 0.3 cm (1.5%) and 0.5 m (2.9%), respectively. Precision was also assessed by tree species and tree size classes; however, there were no statistically significant differences between the mensurationists for dbh or height measurements. Our study offers insights into the expected precision of tree dbh and height as measured with the most commonly used devices. These results are important when using sample plot data in forest inventory applications, especially now, at a time when new tree attribute measurement techniques based on remote sensing are being developed and compared to the conventional caliper and clinometer measurements.Peer reviewe

Assessing spectral measures of post-harvest forest recovery with field plot data

Information regarding the nature and rate of forest recovery is required to inform forest management, monitoring, and reporting activities. Delayed establishment or return of forests has implications to harvest rotations and carbon uptake, among others, creating a need for spatially-explicit, large-area, characterizations of forest recovery. Landsat time series (LTS) has been demonstrated as a means to quantitatively relate forest recovery, noting that there are gaps in our understanding of the linkage between spectral measures of forest recovery and manifestations of forest structure and composition. Field plots provide a means to better understand the linkage between forest characteristics and spectral recovery indices. As such, from a large set of existing field plots, we considered the conditions present for the year in which the co-located pixel was considered spectrally recovered using the Years to Recovery (Y2R) metric. Y2R is a long-term metric of spectral recovery that indicates the number of years required for a pixel to return to 80% of its pre-disturbance Normalized Burn Ratio value. Absolute and relative metrics of recovery at 5 years post-disturbance were also considered. We used these three spectral recovery metrics to predict the stand development class assigned by the field crew for 284 seedling plots with an overall accuracy of 73.59%, with advanced seedling stands more accurately discriminated (omission error, OE = 15.74%) than young seedling stands (OE = 49.84%). We then used field-measured attributes (e.g. height, stem density, dominant species) from the seedling plots to classify the plots into three spectral recovery groups, which were defined using the Y2R metric: spectral recovery in (1) 1–5 years, (2) 6–10 years, or (3) 11–15 years. Overall accuracy for spectral recovery groups was 61.06%. Recovery groups 1 and 3 were discriminated with greater accuracy (producer’s and user’s accuracies > 66%) than recovery group 2 ( 66%) than recovery group 2 ( 66%) than recovery group 2 (<50%). The top field-measured predictors of spectral recovery were mean height, dominant species, and percentage of stems in the plot that were deciduous. Variability in stand establishment and condition make it challenging to accurately discriminate among recovery rates within 10 years post-harvest. Our results indicate that the long-term metric Y2R relates to forest structure and composition attributes measured in the field and that spectral development post-disturbance corresponds with expectations of structural development, particularly height, for different species, site types, and deciduous abundance. These results confirm the utility of spectral recovery measures derived from LTS data to augment landscape-level assessments of post-disturbance recovery.Peer reviewe

Variability of wood properties using airborne and terrestrial laser scanning

Information on wood properties is crucial in estimating wood quality and forest biomass and thus developing the precision and sustainability of forest management and use. However, wood properties are highly variable between and within trees due to the complexity of wood formation. Therefore, tree-specific field references and spatially transferable models are required to capture the variability of wood quality and forest biomass at multiple scales, entailing high-resolution terrestrial and aerial remote sensing methods. Here, we aimed at identifying select tree traits that indicate wood properties (i.e. wood quality indicators) with a combination of terrestrial laser scanning (TLS) and airborne laser scanning (ALS) in an examination of 27 even-aged, managed Scots pine (Pinus sylvestris L.) stands in southern Finland. We derived the wood quality indicators from tree models sampled systematically from TLS data and built prediction models with respect to individual crown features delineated from ALS data. The models were incapable of predicting explicit branching parameters (height of the lowest dead branch R2 = 0.25, maximum branch diameter R2 = 0.03) but were suited to predicting stem and crown dimensions from stand, tree, and competition factors (diameter at breast height and sawlog volume R2 = 0.5, and live crown base height R2 = 0.4). We were able to identify the effect of canopy closure on crown longevity and stem growth, which are pivotal to the variability of several wood properties in managed forests. We discussed how the fusions of high-resolution remote sensing methods may be used to enhance sustainable management and use of natural resources in the changing environment.Peer reviewe

Landsat archive holdings for Finland : opportunities for forest monitoring

There is growing interest in the use of Landsat data to enable forest monitoring over large areas. Free and open data access combined with high performance computing have enabled new approaches to Landsat data analysis that use the best observation for any given pixel to generate an annual, cloud-free, gap-free, surface reflectance image composite. Finland has a long history of incorporating Landsat data into its National Forest Inventory to produce forest information in the form of thematic maps and small area statistics on a variety of forest attributes. Herein we explore the spatial and temporal characteristics of the Landsat archive in the context of forest monitoring in Finland. The United States Geological Survey Landsat archive holds a total of 30 076 images (1972-2017) for 66 scenes (each 185 km by 185 km in size) representing the terrestrial area of Finland, of which 93.6% were acquired since 1984 with a spatial resolution of 30 m. Approximately 16.3% of the archived images have desired compositing characteristics (acquired within August 1 +/- 30 days,Peer reviewe

Aboveground forest biomass derived using multiple dates of WorldView-2 stereo-imagery : quantifying the improvement in estimation accuracy

The aim of this study was to investigate the capabilities of two date satellite-derived image-based point clouds (IPCs) to estimate forest aboveground biomass (AGB). The data sets used include panchromatic WorldView-2 stereo-imagery with 0.46 m spatial resolution representing 2014 and 2016 and a detailed digital elevation model derived from airborne laser scanning data. Altogether, 332 field sample plots with an area of 256 m(2) were used for model development and validation. Predictors describing forest height, density, and variation in height were extracted from the IPC 2014 and 2016 and used in k-nearest neighbour imputation models developed with sample plot data for predicting AGB. AGB predictions for 2014 (AGB(2014)) were projected to 2016 using growth models (AGB(Projected_2016)) and combined with the AGB estimates derived from the 2016 data (AGB(2016)). AGB prediction model developed with 2014 data was also applied to 2016 data (AGB(2016_pred2014)). Based on our results, the change in the 90(th) percentile of height derived from the WorldView-2 IPC was able to characterize forest height growth between 2014 and 2016 with an average growth of 0.9 m. Features describing canopy cover and variation in height derived from the IPC were not as consistent. The AGB(2016) had a bias of -7.5% (-10.6 Mg ha(-1)) and root mean square error (RMSE) of 26.0% (36.7 Mg ha(-1)) as the respective values for AGB(Projected_2016) were 7.0% (9.9 Mg ha(-1)) and 21.5% (30.8 Mg ha(-1)). AGB(2016_pred2014) had a bias of -19.6% (-27.7 Mg ha(-1)) and RMSE of 33.2% (46.9 Mg ha(-1)). By combining predictions of AGB(2016) and AGB(Projected_2016) at sample plot level as a weighted average, we were able to decrease the bias notably compared to estimates made on any single date. The lowest bias of -0.25% (-0.4 Mg ha(-1)) was obtained when equal weights of 0.5 were given to the AGB(Projected_2016) and AGB(2016) estimates. Respectively, RMSE of 20.9% (29.5 Mg ha(-1)) was obtained using equal weights. Thus, we conclude that combination of two date WorldView-2 stereo-imagery improved the reliability of AGB estimates on sample plots where forest growth was the only change between the two dates.Peer reviewe

Whole mitochondrial genome sequencing provides new insights into the phylogeography of loggerhead turtles (Caretta caretta) in the Mediterranean Sea

Population structure and phylogeography of the loggerhead sea turtle (Caretta caretta) have so far been assessed mainly by mitochondrial DNA (mtDNA) single-gene sequencing studies. However, phylogenetic relationships amongst matrilines, genetic characterisation of rookeries and mixed-stock analyses have suffered from the limited resolution obtained by comparison of relatively short sequences such as from the mtDNA control region. Whole mitogenome sequencing can significantly improve population genetics, particularly in marine organisms showing female natal philopatry. Despite mitogenomics becoming increasingly common in biodiversity monitoring and conservation, only a few complete mitogenomes are available for C. caretta. In this study, we sequenced the complete mtDNA of 61 loggerhead turtles sampled between 2008 and 2021 along the Italian coastline and central Mediterranean Sea. We assigned complete mtDNA haplotypes to dead embryos and bycatch samples, and introduced a first nomenclature for loggerhead mitogenomes. Analysis of mtDNA diversity, Maximum Parsimony and Bayesian phylogenetic reconstruction allowed improved resolution of lineages with respect to studies reporting on partial mtDNA control region sequence comparisons, and we were able to further inform previous analyses on loggerhead ancestry based on control region haplogroups. Overall, whole mitogenome analysis has potential for considerable improvement of evolutionary history and phylogeographic investigations as well as mixed-stock surveys of loggerhead turtles

Biofuels Policy in Europe Under the Directive 2003/30: An Analysis of Goals, Hindrances, Instruments and Effects

Up to 2008/2009, biofuels were considered one of the best alternatives to oil consumption in a captive market like transports, being one of the pillars of the 20-20-20 initiative in Europe. Improvement of security of supply through partial substitution of imported oil; reduction of GHGs emissions; improvement of income and employment in the agricultural and rural sectors were the main drivers of the promotion of biofuels in Europe, as well as in the United States and in Brazil. In the European Union biofuels policy was supported through Directive 2003/30. However its effects proved to be disappointing: the consumption of biofuels was expected by the Directive to account for 5.75% share of road fuels in 2010 in the European MSs, but it came early clear that such a target could not be met. Above all, consensus about biofuels decreased sharply when their ability to strongly decrease overall GHGs emissions was questioned, and when they were blamed of being the main responsible of the 2007-2008 food price increase. Finally, a new Directive was approved on April 23rd, 2009, including the request of various certifications to prove the sustainability of biofuels. The paper deals deeply with the biofuel experience in Europe, providing a general analysis of the 2003/30 Directive. It includes an evaluation of the difficulties met in satisfying the requested targets, an assessment of the MSs policies to support biofuels, and a discussion about the main features of the (failed) birth of a new industry

A revision of the status of Lepadogaster lepadogaster (Teleostei : Gobiesocidae): sympatric subspecies or a long misunderstood blend of species?

Molecular (partial mitochondrial 12S ribosomal DNA sequences), morphological and meristic analysis of Lepadogaster lepadogaster lepadogaster, L. l. purpurea and L. zebrina were performed to investigate the relationships between these taxa. On the western shore of mainland Portugal, where the two subspecies of L. lepadogaster occur sympatrically, they differ in microhabitat preferences and their breeding seasons are largely out of phase. This information, combined with data on distribution patterns, led to the following conclusions: Lepadogaster l. purpurea is considered to be a valid species, L. purpurea (Bonnaterre, 1788), different from L. l. lepadogaster, now designated L. lepadogaster (Bonnaterre, 1788). L. zebrina was found to be a synonym of L. lepadogaster. The two newly defined species were found to be in sympatry at Madeira and the Canary islands, the Atlantic coast of the Iberian Peninsula, and the Mediterranean at least as far as Genoa (Italy). Diagnostic characters and a list of synonyms are provided. (C) 2002 The Linnean Society of London, Biological Journal of the Linnean Society, 2002, 76, 327-338

Tracking Signals of Change in Mediterranean Fish Diversity Based on Local Ecological Knowledge

One of the expected effects of global change is increased variability in the abundance and distribution of living organisms, but information at the appropriate temporal and geographical scales is often lacking to observe these patterns. Here we use local knowledge as an alternative information source to study some emerging changes in Mediterranean fish diversity. A pilot study of thirty-two fishermen was conducted in 2009 from four Mediterranean locations along a south-north gradient. Semi-quantitative survey information on changes in species abundance was recorded by year and suggests that 59 fish species belonging to 35 families have experienced changes in their abundance. We distinguished species that increased from species that decreased or fluctuated. Multivariate analysis revealed significant differences between these three groups of species, as well as significant variation between the study locations. A trend for thermophilic taxa to increase was recorded at all the study locations. The Carangidae and the Sphyraenidae families typically were found to increase over time, while Scombridae and Clupeidae were generally identified as decreasing and Fistularidae and Scaridae appeared to fluctuate in abundance. Our initial findings strongly suggest the northward expansion of termophilic species whose occurrence in the northern Mediterranean has only been noted previously by occasional records in the scientific literature