Survey of chicken abattoir for the presence of Campylobacter jejuni and Campylobacter coli

The genus Campylobacter is of great importance to public health because it includes several species that may cause diarrhea. These species may be found in water, food and in the intestinal tract of chickens. This study investigated the presence of Campylobacter jejuni and Campylobacter coli in chicken abattoirs in São Paulo State, Brazil. A total of 288 samples of feces, feathers, scald water, evisceration water, chiller water, and the rinse water of eviscerated, not eviscerated and chilled carcasses were collected in six chicken abattoirs. Polymerase Chain Reaction (PCR) was performed in Campylobacter spp.-positive isolates using the gene HIP, specific for hippuricase enzyme from Campylobacter jejuni and aspartokinase gene, specific to detect Campylobacter coli. The percentage of positive isolates of Campylobacter jejuni was 4.9% (14/288). Isolation was greater in feces samples (22%, 8/36). One sample was positive for the species C. coli. In conclusion, the results indicate that it is necessary to improve quality control for Campylobacter spp. in chicken abattoirs.O gênero Campylobacter tem grande destaque em saúde pública, principalmente por pertencerem a este gênero várias espécies que podem causar diarréia. Estas espécies podem ser encontradas em amostras de água, alimentos e no trato intestinal das aves. Este estudo investigou a presença de Campylobacter jejuni e Campylobacter coli em abatedouros de aves no Estado de São Paulo. As 288 amostras foram coletadas em seis estabelecimentos e incluíram: fezes; penas; água de escaldamento, de evisceração e de resfriamento; e água de enxaguadura de carcaça não eviscerada, eviscerada e resfriada. Após o isolamento microbiológico das amostras positivas de Campylobacter spp. foi realizada uma Reação em Cadeia da Polimerase (PCR) utilizando o gene HIP, da hipuricase, específico para Campylobacter jejuni e o gene da enzima aspartoquinase, específico para Campylobacter coli. A porcentagem de amostras positivas para Campylobacter spp. foi de 4,9% (14/288), sendo que o isolamento foi maior em amostras de fezes (22%, 8/36). Foi isolada uma amostra positiva para C. coli. Em conclusão, os resultados indicam que há uma necessidade de melhorar a qualidade higiênico-sanitária do controle de Campylobacter em abatedouros de aves

ATERRO SANITÁRIO: RELEVÂNCIA E TÉCNICAS DE IMPERMEABILIZAÇÃO DO SOLO

O objetivo deste artigo é mostrar a importância da impermeabilização adequada em aterros sanitários e as principais técnicas de impermeabilidade para evitar a contaminação do solo e do lençol freático. A metodologia adotada baseou-se em pesquisa bibliográfica. O aterro sanitário é um processo utilizado para disposição final de rejeitos e resíduos sólidos no solo, particularmente lixo domiciliar. A impermeabilização do solo tem a função de proteger e impedir a infiltração do chorume, líquido originado dos processos biológicos, químicos e físicos da decomposição de resíduos orgânicos, para o subsolo e aquíferos existentes. Entre todos os aspectos que precisam ser conferidos em um aterro sanitário, desde o preparo da área e construção até sua operação e monitoramento, ressalta-se o sistema de impermeabilização de base. Em locais onde o solo não apresenta as características necessárias ao emprego de barreira impermeabilizante, é utilizado o acréscimo de bentonita ao solo. Em conjunto com a aplicação da camada impermeabilização e fundação do aterro, são introduzidos sistemas para drenar os líquidos. Diante disso, o presente trabalho discutiu em seus resultados as técnicas de permeabilidade como Liners utilizados em aterros sanitários, Lodo aplicado como camada de cobertura, Resíduos de construção e demolição (RCD) aplicados como camada de cobertura, Barreira capilar aplicada como camada de cobertura, Solo compactado aplicado como camada de cobertura e impermeabilização de base, Geossintéticos aplicados como camada de impermeabilização de base, Solo cimento aplicado como impermeabilização de base e Bentonita aplicada como impermeabilização de base

Abortamento e morte embrionária em receptoras bovinas por Histophilus somni (Haemophilus somnus)

Histophilus somni (Haemophilus somnus)  é um importante patógeno que pode desencadear quatro diferentes tipos de manifestações: doença respiratória, meningoencefalopatia trombótica (TEM), artrite e distúrbios reprodutivos. A via de infecção geralmente é a respiratória, porém nos distúrbios reprodutivos, pode ser transmitido através de muco prepucial, sêmen e secreções vaginais contaminadas causando metrite, infertilidade, morte embrionária precoce, abortamento ao redor dos 6 a 9 meses de gestação por morte fetal ou placentite, vulvovaginite granular e orquiepidimite crônica. O presente trabalho tem por objetivo relatar o isolamento e detecção pela Reação da Polimerase em Cadeia (PCR) de Histophilus somni de um feto bovino abortado e de um aspirado uterino de duas receptoras de embrião da raça Red Angus, oriundas de gado de corte da região de Campo Grande-MS. Trata-se do primeiro caso no Brasil de isolamento de H. somni de aborto bovino, demonstrando a importância do diagnóstico diferencial mais abrangente. Além disto, ressalta-se também o risco sanitário de transmissão de H. somni por transferência de embriões

Case–control study of pathogens involved in piglet diarrhea

Abstract\ud \ud Background\ud Diarrhea in piglets directly affects commercial swine production. The disease results from the interaction of pathogens with the host immune system and is also affected by management procedures. Several pathogenic agents such as Campylobacter spp., Clostridium perfringens, Escherichia coli, Salmonella spp., group A rotavirus (RV-A), coronaviruses (transmissible gastroenteritis virus; porcine epidemic diarrhea virus), as well as nematode and protozoan parasites, can be associated with disease cases.\ud \ud \ud Results\ud All bacterial, viral, protozoan, and parasitic agents here investigated, with the exception of Salmonella spp. as well as both coronaviruses, were detected in varying proportions\ud in piglet fecal samples, and positive animals were equally distributed between case and control groups. A statistically significant difference between case and control groups was found only for Cystoisospora suis (p = 0.034) and Eimeria spp. (p = 0.047). When co-infections were evaluated, a statistically significant difference was found only for C. perfringens β2 and C. suis (p = 0.014).\ud \ud \ud Conclusions\ud The presence of pathogens in piglets alone does not determine the occurrence of diarrhea episodes. Thus, the indiscriminate use of antibiotic and anthelminthic medication should be re-evaluated. This study also reinforces the importance of laboratory diagnosis and correct interpretation of results as well as the relevance of control and prophylactic measures.This work was supported by São Paulo Research Foundation (FAPESP)\ud (project number 2010/00390-5 and scholarship support 2011/01563-3 and\ud 2011/19666-3)

Case–control study of pathogens involved in piglet diarrhea

Abstract\ud \ud Background\ud Diarrhea in piglets directly affects commercial swine production. The disease results from the interaction of pathogens with the host immune system and is also affected by management procedures. Several pathogenic agents such as Campylobacter spp., Clostridium perfringens, Escherichia coli, Salmonella spp., group A rotavirus (RV-A), coronaviruses (transmissible gastroenteritis virus; porcine epidemic diarrhea virus), as well as nematode and protozoan parasites, can be associated with disease cases.\ud \ud \ud Results\ud All bacterial, viral, protozoan, and parasitic agents here investigated, with the exception of Salmonella spp. as well as both coronaviruses, were detected in varying proportions\ud in piglet fecal samples, and positive animals were equally distributed between case and control groups. A statistically significant difference between case and control groups was found only for Cystoisospora suis (p = 0.034) and Eimeria spp. (p = 0.047). When co-infections were evaluated, a statistically significant difference was found only for C. perfringens β2 and C. suis (p = 0.014).\ud \ud \ud Conclusions\ud The presence of pathogens in piglets alone does not determine the occurrence of diarrhea episodes. Thus, the indiscriminate use of antibiotic and anthelminthic medication should be re-evaluated. This study also reinforces the importance of laboratory diagnosis and correct interpretation of results as well as the relevance of control and prophylactic measures.This work was supported by São Paulo Research Foundation (FAPESP)\ud (project number 2010/00390-5 and scholarship support 2011/01563-3 and\ud 2011/19666-3)

Ehrlichia chaffeensis Transcriptome in Mammalian and Arthropod Hosts Reveals Differential Gene Expression and Post Transcriptional Regulation

BACKGROUND: Human monocytotropic ehrlichiosis is an emerging life-threatening zoonosis caused by obligately intracellular bacterium, Ehrlichia chaffeensis. E. chaffeensis is transmitted by the lone star tick, Amblyomma americanum, and replicates in mononuclear phagocytes in mammalian hosts. Differences in the E. chaffeensis transcriptome in mammalian and arthropod hosts are unknown. Thus, we determined host-specific E. chaffeensis gene expression in human monocyte (THP-1) and in Amblyomma and Ixodes tick cell lines (AAE2 and ISE6) using a whole genome microarray. METHODOLOGY/PRINCIPAL FINDINGS: The majority (∼80%) of E. chaffeensis genes were expressed during infection in human and tick cells. There were few differences observed in E. chaffeensis gene expression between the vector Amblyomma and non-vector Ixodes tick cells, but extensive host-specific and differential gene expression profiles were detected between human and tick cells, including higher transcriptional activity in tick cells and identification of gene subsets that were differentially expressed in the two hosts. Differentially and host-specifically expressed ehrlichial genes encoded major immunoreactive tandem repeat proteins (TRP), the outer membrane protein (OMP-1) family, and hypothetical proteins that were 30-80 amino acids in length. Consistent with previous observations, high expression of p28 and OMP-1B genes was detected in human and tick cells, respectively. Notably, E. chaffeensis genes encoding TRP32 and TRP47 were highly upregulated in the human monocytes and expressed as proteins; however, although TRP transcripts were expressed in tick cells, the proteins were not detected in whole cell lysates demonstrating that TRP expression was post transcriptionally regulated. CONCLUSIONS/SIGNIFICANCE: Ehrlichia gene expression is highly active in tick cells, and differential gene expression among a wide variety of host-pathogen associated genes occurs. Furthermore, we demonstrate that genes associated with host-pathogen interactions are differentially expressed and regulated by post transcriptional mechanisms

Global patterns of care in advanced stage mycosis fungoides/Sezary syndrome: a multicenter retrospective follow-up study from the Cutaneous Lymphoma International Consortium

ABSTRACT Background Advanced-stage mycosis fungoides (MF)/Sezary syndrome (SS) patients are weighted by an unfavorable prognosis and share an unmet clinical need of effective treatments. International guidelines are available detailing treatment options for the different stages but without recommending treatments in any particular order due to lack of comparative trials. The aims of this second CLIC study were to retrospectively analyze the pattern of care worldwide for advanced-stage MF/SS patients, the distribution of treatments according to geographical areas (USA versus non-USA), and whether the heterogeneity of approaches has potential impact on survival. Patients and methods This study included 853 patients from 21 specialist centers (14 European, 4 USA, 1 each Australian, Brazilian, and Japanese). Results Heterogeneity of treatment approaches was found, with up to 24 different modalities or combinations used as first-line and 36% of patients receiving four or more treatments. Stage IIB disease was most frequently treated by total-skin-electron-beam radiotherapy, bexarotene and gemcitabine; erythrodermic and SS patients by extracorporeal photochemotherapy, and stage IVA2 by polychemotherapy. Significant differences were found between USA and non-USA centers, with bexarotene, photopheresis and histone deacetylase inhibitors most frequently prescribed for first-line treatment in USA while phototherapy, interferon, chlorambucil and gemcitabine in non-USA centers. These differences did not significantly impact on survival. However, when considering death and therapy change as competing risk events and the impact of first treatment line on both events, both monochemotherapy (SHR = 2.07) and polychemotherapy (SHR = 1.69) showed elevated relative risks. Conclusion This large multicenter retrospective study shows that there exist a large treatment heterogeneity in advanced MF/SS and differences between USA and non-USA centers but these were not related to survival, while our data reveal that chemotherapy as first treatment is associated with a higher risk of death and/or change of therapy and thus other therapeutic options should be preferable as first treatment approach

Characterization of Clostridium perfringens isolates from ruminants

C. perfringens é uma bactéria anaeróbia presente no intestino delgado do homem e animais em equilíbrio e, sob a ação de alguns fatores predisponentes como mudança brusca de alimentação ou super alimentação, stress no manejo ou alto parasitismo intestinal, há a proliferação do microrganismo com a consequente produção de potentes toxinas que provocam a morte do animal. Dentre as toxinas principais destaca-se a toxina alfa, importante fator de virulência, produzida por todos os tipos de C. perfringens, sendo os pertencentes ao tipo A os maiores produtores. A fim de caracterizar o microrganismo em suspeitas de enterotoxemia em ruminantes, trabalhamos com 61 amostras de intestino delgado de bovinos e 12 de ovinos como grupo estudo e no grupo controle composto de animais hígidos levados ao abate, 73 amostras de intestino delgado de bovinos e 24 de ovinos. Foram realizados procedimentos de isolamento e tipagem molecular de C. perfringens e quantificação celular, detecção molecular da toxina &beta;2, além de avaliações moleculares qualitativa (PCR convencional) e quantitativa (PCR em tempo real) do gene da toxina alfa dos diferentes isolados. Em 29 amostras do grupo estudo bovino (47,54%) e em 4 (33,33%) do grupo estudo ovino isolou-se o microrganismo, em contrapartida no grupo controle bovino não houve isolamento do bacilo e 5 amostras do grupo controle ovino (20,83%) foram positivas. Houve diferença estatisticamente significante somente entre os grupos de bovinos (p<0,05). Todos os isolados (100%) foram classificados como tipo A, e os resultados das quantificações celulares de C. perfringens revelaram que todos os bovinos controle apresentaram <10 UFC/g de conteúdo enquanto que o grupo estudo apresentou mediana de 104 UFC/g com variações de <10 UFC/g até 108 UFC/g. Nos ovinos, a mediana no grupo controle foi 101 UFC/g assim como no grupo estudo, entretanto com clara separação de valores entre os grupos. Tanto na PCR convencional quanto na PCR em tempo real para detecção do RNAm da toxina alfa foi observado limiar de detecção de 102 cópias de cDNA por reação, porém provavelmente devido aos valores das amostras estarem próximos ao limite da sensibilidade analítica da reação, não foi observada boa reprodutibilidade da última. Já na reação molecular convencional, observou-se a presença de detecção de RNAm da toxina alfa em 60,52% dos isolados o que revela alguma diferença da presença do transcrito entre as culturas, já que nas cepas restantes não foi detectada a presença do RNAm em questão. A pesquisa do gene da toxina &beta;2 revelou sua presença em 54,55% dos isolados de C. perfringens corroborando com a afirmativa de que o gene está amplamente distribuído entre os ruminantes. A metodologia aplicada para avaliação da expressão do gene da toxina alfa nos isolados mostrou que há diferenças dos níveis de transcrição porém não permitiu quantificar esses valores. A tipagem molecular corrobora com outros estudos quanto à importância epidemiológica do tipo A nos quadros de enterotoxemia em ruminantes, e os dados da quantificação celular permite-nos concluir que animais sadios possuem um nível basal de C. perfringens <10 UFC/g de conteúdo que não possibilita o seu isolamento.C. perfringens is an anaerobe present in small intestine of man and animals in equilibrium, and under some predisposing factors such as sudden feeding change or super feeding, rough management or high intestinal parasitism, the microorganism multiplies with the consequent production of potent toxins that can cause animal death. Amongst the main toxins, alpha toxin is an important virulence factor, that is produced by all C. perfringens types, and those belonging to type A are its higher producer. Aiming to characterize the microorganism in ruminants suspect of enterotoxaemia, we evaluated 61 bovine small intestinal samples and 12 sheep small intestines as the study group, and for the control group composed by higid animals led to slaughterhousing, 73 bovine small intestines and 24 ovine samples. We performed microbiological culture and molecular typing of C. perfringens isolates, cellular quantification, molecular detection of 2 toxin, and qualitative and quantitative molecular evaluations of alpha toxin from different isolates by means of conventional PCR and real time PCR, respectively. In 29 samples from the bovine study group (47.54%) and in 4 (33.33%) from ovine study group the microorganism was isolated, however in the bovine control group there was no isolation success and 5 samples from sheep control group (20.83%) were positive. There was statistically significant difference only between bovine groups (p<0,05). All isolates (100%) were classified as type A, and C. perfringens cellular quantification results showed that every control bovine presented <10 CFU/g of intestinal contents while the study group presented a median of 104 CFU/g with results ranging from <10 CFU/g to 108 CFU/g. In sheep, the median value in the control group was 101 CFU/g as in the study group, but with a clear division of values between the groups. We observed the threshold detection of 102 cDNA copies per reaction in both conventional and real time PCR reactions for alpha toxin mRNA detection, however since the samples quantification values were close to the analytical sensitivity of the test, we could not observe the reproducibility in the last technique. In the conventional PCR reaction, alpha toxin mRNA was detected in 60.52% of the isolates. This result reveals some difference in the transcript presence among the cultures, since we could not detect the presence of the described mRNA in the other isolates. Beta2 toxin gene was detected in 54.55% of C. perfringens isolates corroborating with the affirmative that this gene is widely distributed among ruminants. The methodology presented herein for the evaluation of alpha toxin gene expression showed that there are differences in the transcription levels, however it didnt allow to quantify these values. Molecular typing results agree with other studies regarding the epidemiological importance of type A in the enterotoxaemia processes in ruminants, and the cellular quantification data allow us to conclude that healthy animals show a basal level of C. perfringens <10 CFU/g of intestinal content that doesnt allow its isolation

Presence of Brucella abortus DNA in clandestine dairy products: differentiation between vaccinal (B19) and field strains by polymerase chain reaction (PCR)

A técnica de PCR, utilizando-se \"primers\" desenhados a partir do gene que codifica uma proteína imunogênica de 31 KDa de Brucella abortus, foi empregada na detecção de Brucella spp. em 300 amostras de produtos lácteos clandestinos apreendidas em municípios dos Estados de São Paulo (SP) e de Minas Gerais (MG). Foram analisadas 49 amostras de queijo minas frescal e 18 de queijo meia-cura provenientes de MG, e 92 amostras de queijo minas frescal, 33 amostras de queijo meia-cura e 108 amostras de leite cru provenientes de SP. O isolamento bacteriano foi tomado como referência, porém não se isolou Brucella spp. de nenhuma das amostras cujos cultivos mostraram-se contaminados com outros gêneros bacterianos. Pela PCR foi observado que 37 amostras de queijo foram positivas: 29/141 (20,56 %) das amostras de queijo minas frescal e 8/51 (15,68%) das amostras de queijo meia-cura. Todas as amostras positivas na PCR para Brucella spp. foram confirmadas como sendo da espécie Brucella abortus pela técnica de PCR utilizando-se \"primers\" espécie-específicos. Foi instituída a reação de hemi-nested PCR para a diferenciação da cepa em B19 ou campo tomando-se como base a deleção genética de 702 pb existente na cepa vacinal B19. A padronização da técnica permitiu que todas as cepas de Brucella spp. fossem diferenciadas, revelando que 30 (81,08%) amostras eram B19 e 7 (18,92%) eram cepas de Brucella abortus de campo. A concordância estimada entre as técnicas de PCR e do cultivo microbiológico através do indicador Kappa foi considerada baixa (K = 0) devido ao não isolamento do microrganismo.A PCR assay using primers designed based on the gene that encodes a 31 KDa immunogenic protein from Brucella abortus was used in the detection of Brucella spp. in 300 samples of illegal dairy products obtained in cities of the states of São Paulo (SP) and Minas Gerais (MG), Brazil. A total of 49 samples of minas frescal cheese and 18 samples of meia-cura cheese from MG were analyzed, besides 92 samples of minas frescal cheese, 33 samples of meia-cura cheese and 108 samples of raw milk from SP. Although bacterial isolation was used as reference, Brucella spp. was not isolated from any samples in which culture was contaminated by other genera of bacteria. PCR showed that 37 samples were positive for Brucella spp.: 29/141 (20,56 %) of the minas frescal cheese samples and 8/51 (15,68%) of the meia-cura cheese samples. All positive samples for Brucella spp. were confirmed as Brucella abortus by PCR using species-specific primers. Hemi-nested PCR was used for the differentiation between B19 and field strains, based on the genetic deletion of 702 pb in the vaccinal strain. Standardization of the technique enabled the differentiation of all Brucella spp. strains, showing that 30 of them (81,08%) were B19 and 7 (18,92%) of them were Brucella abortus field strains. Estimated agreement between PCR and microbiological culture as determined by Kappa indicator was considered to be poor (K = 0) due to the absence of isolation of the microorganism