VLF, magnetic bay and Pi2 substorm signatures at auroral and midlatitude ground stations

A superposed epoch analysis of 100–300 substorms is performed to determine the median size and shape of the substorm-associated VLF chorus, magnetic bay, and Pi2 pulsation burst observed at the near-auroral Halley research station, Antarctica, and at the midlatitude Faraday station at three different local times (2230, 2330, 0130 MLT). The spatial and temporal properties of the magnetic bay signatures are compared with the University of York implementation of the Kisabeth–Rostoker substorm current wedge (SCW) model and the Weimer pulse model, respectively. These constitute the best analytical models of the substorm to date. It is shown that the polarities and relative amplitudes of the observed magnetic bays in the H, D, and Z components at Halley at midnight MLT and at Faraday in the premidnight sector are consistent with the York model for a SCW 3 hours wide in MLT with its westward electrojet at 67°S magnetic latitude. In particular the little-discussed Z component of the bay agrees with the model and is shown to be the clearest substorm signature of the three components, especially at midlatitude. The midnight and postmidnight bays are similar to the premidnight case but progressively smaller and cannot be fully reconciled with the model. The shape of the H and Z bays at Halley and the D bays at Faraday fit a normalized Weimer pulse well, with Weimer's 2 h−1 recovery rate, but the other components do not. The D component at Halley and H at Faraday do fit the Weimer pulse shape but with a faster recovery rate of 4 h−1. It is proposed that this is due to the effect of a decaying current in the SCW combining with the geometrical effect of changing SCW configuration and position relative to the observing station. The Z component at Faraday recovers more slowly than the 2 h−1 Weimer prediction; we cannot explain this. Secondary bays at Halley and Faraday show a clear tendency to recur after 2 hours. Inflection points just prior to onset at Halley and Faraday are argued to be related to reduced convection associated with northward turning of the IMF. The median substorm signature at Halley in the Pi2 frequency band (7–25 mHz) is well correlated with the bay structure, showing that it is part of a broader band, possibly turbulent, spectrum in the substorm-dependent DP2 current. There is evidence of a minor additional narrow band component occurring at substorm onset. This is the dominant signal at Faraday which shows the classic midlatitude substorm signature, a short Pi2 pulsation burst at onset, that decreases progressively in intensity with increasing local time, implying a source region biased to the evening side or else preferred propagation to the east from a near-midnight source

Seasonal temperature acclimatization in a semi-fossorial mammal and the role of burrows as thermal refuges.

Small mammals in habitats with strong seasonal variation in the thermal environment often exhibit physiological and behavioral adaptations for coping with thermal extremes and reducing thermoregulatory costs. Burrows are especially important for providing thermal refuge when above-ground temperatures require high regulatory costs (e.g., water or energy) or exceed the physiological tolerances of an organism. Our objective was to explore the role of burrows as thermal refuges for a small endotherm, the pygmy rabbit (Brachylagus idahoensis), during the summer and winter by quantifying energetic costs associated with resting above and below ground. We used indirect calorimetry to determine the relationship between energy expenditure and ambient temperature over a range of temperatures that pygmy rabbits experience in their natural habitat. We also measured the temperature of above- and below-ground rest sites used by pygmy rabbits in eastern Idaho, USA, during summer and winter and estimated the seasonal thermoregulatory costs of resting in the two microsites. Although pygmy rabbits demonstrated seasonal physiological acclimatization, the burrow was an important thermal refuge, especially in winter. Thermoregulatory costs were lower inside the burrow than in above-ground rest sites for more than 50% of the winter season. In contrast, thermal heterogeneity provided by above-ground rest sites during summer reduced the role of burrows as a thermal refuge during all but the hottest periods of the afternoon. Our findings contribute to an understanding of the ecology of small mammals in seasonal environments and demonstrate the importance of burrows as thermal refuge for pygmy rabbits

Depletion forces near curved surfaces

Based on density functional theory the influence of curvature on the depletion potential of a single big hard sphere immersed in a fluid of small hard spheres with packing fraction \eta_s either inside or outside of a hard spherical cavity of radius R_c is calculated. The relevant features of this potential are analyzed as function of \eta_s and R_c. There is a very slow convergence towards the flat wall limit R_c \to \infty. Our results allow us to discuss the strength of depletion forces acting near membranes both in normal and lateral directions and to make contact with recent experimental results

The lower airway microbiome in paediatric health and chronic disease

The advent of next generation sequencing has rapidly challenged the paediatric respiratory physician’s understanding of lung microbiology and the role of the lung microbiome in host health and disease. In particular, the role of “microbial key players” in paediatric respiratory disease is yet to be fully explained. Accurate profiling of the lung microbiome in children is challenging since the ability to obtain lower airway samples coupled with processing “low-biomass specimens” are both technically difficult. Many studies provide conflicting results. Early microbiota-host relationships may be predictive of the development of chronic respiratory disease but attempts to correlate lower airway microbiota in premature infants and risk of developing bronchopulmonary dysplasia (BPD) have produced mixed results. There are differences in lung microbiota in asthma and cystic fibrosis (CF). The increased abundance of oral taxa in the lungs may (or may not) promote disease processes in asthma and CF. In CF, correlation between microbiota diversity and respiratory decline is commonly observed. When one considers other pathogens beyond the bacterial kingdom, the contribution and interplay of fungi and viruses within the lung microbiome further increase complexity. Similarly, the interaction between microbial communities in different body sites, such as the gut-lung axis, and the influence of environmental factors, including diet, make the co-existence of host and microbes ever more complicated. Future, multi-omics approaches may help uncover novel microbiome-based biomarkers and therapeutic targets in respiratory disease and explain how we can live in harmony with our microbial companions

Seminal plasma and prostaglandin E2 up-regulate fibroblast growth factor 2 expression in endometrial adenocarcinoma cells via E-series prostanoid-2 receptor-mediated transactivation of the epidermal growth factor receptor and extracellular signal-regulated kinase pathway

BACKGROUND: Prostaglandin E(2) (PGE(2)) has been shown to modulate angiogenesis and tumour progression via the E-series prostanoid-2 (EP2) receptor. Endometrial adenocarcinomas may be exposed to endogenous PGE(2) and exogenous PGE(2), present at high concentration in seminal plasma. METHODS: This study investigated fibroblast growth factor 2 (FGF2) mRNA expression and cell signalling in response to seminal plasma or PGE(2), using an endometrial adenocarcinoma (Ishikawa) cell line stably expressing the EP2 receptor (EP2 sense cells) and endometrial adenocarcinoma explants. RESULTS: Seminal plasma and PGE(2) induced a significant up-regulation of FGF2 expression in EP2 sense but not parental untransfected Ishikawa (wild-type) cells (P < 0.05). These effects were inhibited by co-treatment with EP2 receptor antagonist or inhibitors of protein kinase A, c-Src, epidermal growth factor receptor (EGFR) kinase or extracellular signal-regulated kinase (ERK) signalling. The treatment of EP2 sense cells with seminal plasma induced cAMP accumulation and phosphorylation of c-Src, EGFR kinase and ERK via the EP2 receptor. Finally, seminal plasma and PGE(2) significantly increased FGF2 mRNA expression in endometrial adenocarcinoma tissue explants via the EP2 receptor (P < 0.05). CONCLUSIONS: Seminal plasma and PGE(2) can similarly activate FGF2 expression and EP2 receptor signalling in endometrial adenocarcinoma cells. These data highlight the potential for seminal plasma exposure to facilitate tumorigenesis–angiogenesis in endometrial adenocarcinomas in vivo

Alopecia areata is characterized by dysregulation in systemic type 17 and type 2 cytokines, which may contribute to disease‐associated psychological morbidity

Background: Alopecia areata (AA) is a common autoimmune disease, causing patchy hair loss that can progress to involve the entire scalp (totalis) or body (universalis). CD8+NKG2D+ T cells dominate hair follicle pathogenesis, but the specific mechanisms driving hair loss are not fully understood. Objectives To provide a detailed insight into the systemic cytokine signature associated with AA, and assess the association between cytokines and depression. Methods: Multiplex analysis of plasma cytokines from AA patients, psoriatic arthritis (PsA) patients and healthy controls. We also assessed incidence of depression and anxiety using the Hospital Anxiety and Depression Scale. Results: Our analysis identified a systemic inflammatory signature associated with AA, characterised by elevated levels of IL-17A, IL-17F, IL-21 and IL-23 indicative of a type 17 immune response. Circulating levels of the type 2 cytokines IL-33, IL-31 and IL-17E/25 are also significantly increased in AA. In comparison to PsA, AA was associated with higher levels of IL-17F, IL-17E and IL-23. We hypothesised that circulating inflammatory cytokines may contribute to wider comorbidities associated with AA. We assessed psychiatric comorbidity in AA using the Hospital Anxiety and Depression Scale and found that 18% and 51% of people with AA experienced symptoms of depression and anxiety, respectively. Using linear regression modelling, we identified that levels of IL-22 and IL-17E are positively and significantly associated with depression. Conclusion: Our data highlight changes in both type 17 and 2 cytokines, suggesting that complex systemic cytokine profiles may contribute both to the pathogenesis of AA and to the associated depression

Emotion and themes recognition in music utilising convolutional and recurrent neural networks

Emotion is an inherent aspect of music, and associations to music can be made via both life experience and specific musical techniques applied by the composer. Computational approaches for music recognition have been well-established in the research community; however, deep approaches have been limited and not yet comparable to conventional approaches. In this study, we present our fusion system of end-to-end convolutional recurrent neural networks (CRNN) and pre-trained convolutional feature extractors for music emotion and theme recognition1. We train 9 models and conduct various late fusion experiments. Our best performing model (team name: AugLi) achieves 74.2 % ROC-AUC on the test partition which is 1.6 percentage points over the baseline system of the MediaEval 2019 Emotion & Themes in Music task

Macrophage proliferation distinguishes 2 subgroups of knee osteoarthritis patients

Osteoarthritis (OA) is a leading cause of disability, globally. Despite an emerging role for synovial inflammation in OA pathogenesis, attempts to target inflammation therapeutically have had limited success. A better understanding of the cellular and molecular processes occurring in the OA synovium is needed to develop novel therapeutics. We investigated macrophage phenotype and gene expression in synovial tissue of OA and inflammatory-arthritis (IA) patients. Compared with IA, OA synovial tissue contained higher but variable proportions of macrophages (P &lt; 0.001). These macrophages exhibited an activated phenotype, expressing folate receptor-2 and CD86, and displayed high phagocytic capacity. RNA sequencing of synovial macrophages revealed 2 OA subgroups. Inflammatory-like OA (iOA) macrophages are closely aligned to IA macrophages and are characterized by a cell proliferation signature. In contrast, classical OA (cOA) macrophages display cartilage remodeling features. Supporting these findings, when compared with cOA, iOA synovial tissue contained higher proportions of macrophages (P &lt; 0.01), expressing higher levels of the proliferation marker Ki67 (P &lt; 0.01). These data provide new insight into the heterogeneity of OA synovial tissue and suggest distinct roles of macrophages in pathogenesis. Our findings could lead to the stratification of OA patients for suitable disease-modifying treatments and the identification of novel therapeutic targets