Meta-analysis of type 2 Diabetes in African Americans Consortium

Type 2 diabetes (T2D) is more prevalent in African Americans than in Europeans. However, little is known about the genetic risk in African Americans despite the recent identification of more than 70 T2D loci primarily by genome-wide association studies (GWAS) in individuals of European ancestry. In order to investigate the genetic architecture of T2D in African Americans, the MEta-analysis of type 2 DIabetes in African Americans (MEDIA) Consortium examined 17 GWAS on T2D comprising 8,284 cases and 15,543 controls in African Americans in stage 1 analysis. Single nucleotide polymorphisms (SNPs) association analysis was conducted in each study under the additive model after adjustment for age, sex, study site, and principal components. Meta-analysis of approximately 2.6 million genotyped and imputed SNPs in all studies was conducted using an inverse variance-weighted fixed effect model. Replications were performed to follow up 21 loci in up to 6,061 cases and 5,483 controls in African Americans, and 8,130 cases and 38,987 controls of European ancestry. We identified three known loci (TCF7L2, HMGA2 and KCNQ1) and two novel loci (HLA-B and INS-IGF2) at genome-wide significance (4.15 × 10(-94)<P<5 × 10(-8), odds ratio (OR)  = 1.09 to 1.36). Fine-mapping revealed that 88 of 158 previously identified T2D or glucose homeostasis loci demonstrated nominal to highly significant association (2.2 × 10(-23) < locus-wide P<0.05). These novel and previously identified loci yielded a sibling relative risk of 1.19, explaining 17.5% of the phenotypic variance of T2D on the liability scale in African Americans. Overall, this study identified two novel susceptibility loci for T2D in African Americans. A substantial number of previously reported loci are transferable to African Americans after accounting for linkage disequilibrium, enabling fine mapping of causal variants in trans-ethnic meta-analysis studies.Peer reviewe

Implications of meltwater pulse events for soil biology and biogeochemical cycling in a polar desert

The McMurdo Dry Valleys are one of the most arid environments on Earth. Over the soil landscape for the majority of the year, biological and ecosystem processes in the dry valleys are constrained by the low temperatures and limited availability of water. The prevalence of these physical limitations in controlling biological and ecosystem processes makes the dry valleys a climate-sensitive system, poised to experience substantial changes following projected future warming. Short-duration increases in summer temperatures are associated with pulses of water from melting ice reserves, including glaciers, snow and permafrost. Such pulses alter soil geochemistry by mobilizing and redistributing soil salts (via enhanced weathering, solubility and mobility), which can alter habitat suitability for soil organisms. Resulting changes in soil community composition or distribution may alter the biogeochemical processes in which they take part. Here, we review the potential impacts of meltwater pulses and present new field data documenting instances of meltwater pulse events that result from different water sources and hydrological patterns, and discuss their potential influence on soil biology and biogeochemistry. We use these examples to discuss the potential impacts of future climate change on the McMurdo Dry Valley soil ecosystem