266 research outputs found
Mise en place de l'extraction liquide-liquide en microsystèmes établir des écoulements segmentés à façon pour optimiser le transfert de masse
National audienceLiquid-liquid extraction is commonly used for radiochemical analysis. When miniaturized, it can benefitfrom the advantages of microfluidic tools i.e. possible coupling, precise control of the interfacial areabetween the aqueous and organic phases, and contact time. A first study, dedicated to liquid-liquidextraction with parallel flows of europium diluted in nitric acid by the N,N′-dimethyl-N,N′-dibutyltetradecylmalonic diamide [1, 2], allowed us to highlight the limitations of parallel flows for aslow chemical system. One way to optimize yields of extraction of the kinetically slow systems is toincrease the specific interfacial area. For this reason, segmented flows formation and characteristicswere investigated, as a function of the physicochemical properties of a biphasic system, flow rates andthe dimensions of a focalized flux junction. In the following, two multiphase models of the droplets sizecorresponding to the transition and dripping regimes were validated and will be used for theoptimization of the specific interfacial area.L’extraction liquide-liquide est couramment utilisée pour les analyses radiochimiques. Miniaturisée,elle peut bénéficier des avantages des outils microfluidiques qui sont la possibilité de réaliser descouplages, le contrôle précis de l’aire interfaciale entre les phases aqueuse et organique en présence,et des temps de contact. Une première étude, dédiée à l’extraction liquide-liquide en flux parallèlesd’europium en milieu nitrique par le N,N’-dimethyl N,N’-dibutyl tetradecylmalonamide [1, 2], a permisde mettre en évidence les limitations des flux parallèles pour un système chimique lent. Une façond’optimiser les rendements d’extraction des systèmes cinétiquement lents est de mettre en œuvre desécoulements permettant d’augmenter l’aire interfaciale spécifique. C’est pourquoi nous étudions laformation d’écoulements segmentés à façon en fonction des propriétés physico-chimiques d’un systèmechimique biphasique, des débits et des dimensions d’une jonction en flux focalisé. L’utilisation de deuxmodèles de calcul des tailles de gouttes en régimes d’écoulements transitoire
Microstructural and mechanical characterization of yarns made from carbon nanotubes for the instrumentation of particle beams at CERN
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The Hydrogen Epoch of Reionization Array Dish II: Characterization of Spectral Structure with Electromagnetic Simulations and its science Implications
We use time-domain electromagnetic simulations to determine the spectral
characteristics of the Hydrogen Epoch of Reionization Arrays (HERA) antenna.
These simulations are part of a multi-faceted campaign to determine the
effectiveness of the dish's design for obtaining a detection of redshifted 21
cm emission from the epoch of reionization. Our simulations show the existence
of reflections between HERA's suspended feed and its parabolic dish reflector
that fall below -40 dB at 150 ns and, for reasonable impedance matches, have a
negligible impact on HERA's ability to constrain EoR parameters. It follows
that despite the reflections they introduce, dishes are effective for
increasing the sensitivity of EoR experiments at relatively low cost. We find
that electromagnetic resonances in the HERA feed's cylindrical skirt, which is
intended to reduce cross coupling and beam ellipticity, introduces significant
power at large delays ( dB at 200 ns) which can lead to some loss of
measurable Fourier modes and a modest reduction in sensitivity. Even in the
presence of this structure, we find that the spectral response of the antenna
is sufficiently smooth for delay filtering to contain foreground emission at
line-of-sight wave numbers below Mpc, in
the region where the current PAPER experiment operates. Incorporating these
results into a Fisher Matrix analysis, we find that the spectral structure
observed in our simulations has only a small effect on the tight constraints
HERA can achieve on parameters associated with the astrophysics of
reionization.Comment: Accepted to ApJ, 18 pages, 17 Figures. Replacement matches accepted
manuscrip
The Role of Human Papillomaviruses and Polyomaviruses in BRAF-Inhibitor Induced Cutaneous Squamous Cell Carcinoma and Benign Squamoproliferative Lesions
Background: Human papillomavirus (HPV) has long been proposed as a cofactor in the pathogenesis of cutaneous squamous cell carcinoma (cSCC). More recently, the striking clinico-pathological features of cSCCs that complicate treatment of metastatic melanoma with inhibitors targeting BRAF mutations (BRAFi) has prompted speculation concerning a pathogenic role for oncogenic viruses. Here, we investigate HPV and human polyomaviruses (HPyV) and correlate with clinical, histologic, and genetic features in BRAFi-associated cSCC.
Materials and Methods: Patients receiving BRAFi treatment were recruited at Barts Health NHS Trust. HPV DNA was detected in microdissected frozen samples using reverse line probe technology and degenerate and nested PCR. HPV immunohistochemistry was performed in a subset of samples. Quantitative PCR was performed to determine the presence and viral load of HPyVs with affinity for the skin (HPyV6, HPyV7, HPyV9, MCPyV, and TSPyV). These data were correlated with previous genetic mutational analysis of H, K and NRAS, NOTCH1/2, TP53, CDKN2A, CARD11, CREBBP, TGFBR1/2. Chromosomal aberrations were profiled using single nucleotide polymorphism (SNP) arrays.
Results: Forty-five skin lesions from seven patients treated with single agent vemurafenib in 2012–2013 were analyzed: 12 cSCC, 19 viral warts (VW), 2 actinic keratosis (AK), 5 verrucous keratosis/other squamoproliferative (VK/SP) lesions, one melanocytic lesion and 6 normal skin samples. Significant histologic features of viral infection were seen in 10/12 (83%) cSCC. HPV DNA was detected in 18/19 (95%) VW/SP, 9/12 (75%) cSCC, 4/5 (80%) SP, and 3/6 (50%) normal skin samples and in 1/12 cases assessed by immunohistochemistry. HPyV was co-detected in 22/30 (73%) of samples, usually at low viral load, with MCPyV and HPyV7 the most common. SNP arrays confirmed low levels of chromosomal abnormality and there was no significant correlation between HPV or HPyV detection and individual gene mutations or overall mutational burden.
Conclusion: Despite supportive clinicopathologic evidence, the role for HPV and HPyV infection in the pathogenesis of BRAFi-induced squamoproliferative lesions remains uncertain. Synergistic oncogenic mechanisms are plausible although speculative. Nonetheless, with the prospect of a significant increase in the adjuvant use of these drugs, further research is justified and may provide insight into the pathogenesis of other BRAFi-associated malignancies
К 125-летию Иовеля Григорьевича Кутателадзе (1887–1963)
Статья посвящена жизни и деятельности И. Г. Кутателадзе — основателя высшего фармацевтического образования и научной фармации в Грузии, выдающегося фармакохимика, основателя и директора Тбилисского научно-исследовательского института фармакохимии, который с 1964 г. носит его имя, председателя научного общества фармацевтов Грузии и академика АН Грузинской
ССР. Впервые подробно исследуется одесский период его
деятельности.The article is devoted to life and activity of I. G. Kutateladze, founder of higher pharmaceutical education and scientific pharmacy in Georgia, prominent pharmacochemist,
founder and director of the Tbilisi Research Institute of Pharmacochemistry, which has had his name since 1964, chairman of scientific society of pharmacists of Georgia and
academician of AS of Georgian SSR. The Odessa period of
his activity has been studied in details for the first time
An Assessment of Different Genomic Approaches for Inferring Phylogeny of Listeria monocytogenes
Background/objectives: Whole genome sequencing (WGS) has proven to be a powerful subtyping tool for foodborne pathogenic bacteria like L. monocytogenes. The interests of genome-scale analysis for national surveillance, outbreak detection or source tracking has been largely documented. The genomic data however can be exploited with many different bioinformatics methods like single nucleotide polymorphism (SNP), core-genome multi locus sequence typing (cgMLST), whole-genome multi locus sequence typing (wgMLST) or multi locus predicted protein sequence typing (MLPPST) on either core-genome (cgMLPPST) or pan-genome (wgMLPPST). Currently, there are little comparisons studies of these different analytical approaches. Our objective was to assess and compare different genomic methods that can be implemented in order to cluster isolates of L. monocytogenes.Methods: The clustering methods were evaluated on a collection of 207 L. monocytogenes genomes of food origin representative of the genetic diversity of the Anses collection. The trees were then compared using robust statistical analyses.Results: The backward comparability between conventional typing methods and genomic methods revealed a near-perfect concordance. The importance of selecting a proper reference when calling SNPs was highlighted, although distances between strains remained identical. The analysis also revealed that the topology of the phylogenetic trees between wgMLST and cgMLST were remarkably similar. The comparison between SNP and cgMLST or SNP and wgMLST approaches showed that the topologies of phylogenic trees were statistically similar with an almost equivalent clustering.Conclusion: Our study revealed high concordance between wgMLST, cgMLST, and SNP approaches which are all suitable for typing of L. monocytogenes. The comparable clustering is an important observation considering that the two approaches have been variously implemented among reference laboratories
Communion by extension : discrepancies between policy and practice
The growing practice of Communion by Extension was given formal authorisation by the Church of England General Synod in 2000 with the expectation that it would be used in particular circumstances, including explicitly the rural multi-church benefice. This paper reviews the historical origins of the practice of Communion by Extension and clarifies the intentions of the authorisation given in 2000. Then the intentions of the 2000 authorisation are compared and contrasted with current parochial practice within one English diocese. Considerable divergence is found. Five main themes are identified and discussed: the relationship between worship and mission; the pressures on clerical time; sacramental self-sufficiency; the value given to familiarity; and the choice between reservation and congregationalism
Species traits interact with stress level to determine intraspecific facilitation and competition
Questions Flooding and drought stress are expected to increase significantly across the world and plant responses to these abiotic changes may be mediated by plant–plant interactions. Stress tolerance and recovery often require a biomass investment that may have consequences for these plant–plant interactions. Therefore, we questioned whether phenotypic plasticity in response to flooding and drought affected the balance between competition and facilitation for species with specific adaptations to drought or flooding. Location Utrecht University. Methods Stem elongation, root porosity, root:shoot ratio and biomass production were measured for six species during drought, well-drained and submerged conditions when grown alone or together with conspecifics. We quantified competition and facilitation as the ‘neighbour intensity effect’ directly after the 10-day treatment and again after a seven-day recovery period in well-drained conditions. Results Water stress, planting density and species identity interactively affected standardized stem elongation in a way that could lead to facilitation during submergence for species that preferably grow in wet soils. Root porosity was affected by the interaction between neighbour presence and time-step. Plant traits were only slightly affected during drought. The calculated neighbour interaction effect indicated facilitation for wetland species during submerged conditions and, after a period to recover from flooding, for species that prefer dry habitats. Conclusions Our results imply that changing plant–plant interactions in response to submergence and to a lesser extent to drought should be considered when predicting vegetation dynamics due to changing hydroclimatic regimes. Moreover, facilitation during a recovery period may enable species maladapted to flooding to persist
Genome-wide pleiotropy analysis of neuropathological traits related to Alzheimer’s disease
Background
Simultaneous consideration of two neuropathological traits related to Alzheimer’s disease (AD) has not been attempted in a genome-wide association study.
Methods
We conducted genome-wide pleiotropy analyses using association summary statistics from the Beecham et al. study (PLoS Genet 10:e1004606, 2014) for AD-related neuropathological traits, including neuritic plaque (NP), neurofibrillary tangle (NFT), and cerebral amyloid angiopathy (CAA). Significant findings were further examined by expression quantitative trait locus and differentially expressed gene analyses in AD vs. control brains using gene expression data.
Results
Genome-wide significant pleiotropic associations were observed for the joint model of NP and NFT (NP + NFT) with the single-nucleotide polymorphism (SNP) rs34487851 upstream of C2orf40 (alias ECRG4, P = 2.4 × 10−8) and for the joint model of NFT and CAA (NFT + CAA) with the HDAC9 SNP rs79524815 (P = 1.1 × 10−8). Gene-based testing revealed study-wide significant associations (P ≤ 2.0 × 10−6) for the NFT + CAA outcome with adjacent genes TRAPPC12, TRAPPC12-AS1, and ADI1. Risk alleles of proxy SNPs for rs79524815 were associated with significantly lower expression of HDAC9 in the brain (P = 3.0 × 10−3), and HDAC9 was significantly downregulated in subjects with AD compared with control subjects in the prefrontal (P = 7.9 × 10−3) and visual (P = 5.6 × 10−4) cortices.
Conclusions
Our findings suggest that pleiotropy analysis is a useful approach to identifying novel genetic associations with complex diseases and their endophenotypes. Functional studies are needed to determine whether ECRG4 or HDAC9 is plausible as a therapeutic target
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