Extending the ecological distribution of Desmonostoc genus: proposal of Desmonostoc salinum sp. nov., a novel Cyanobacteria from a saline–alkaline lake

Cyanobacteria is an ancient phylum of oxygenic photosynthetic microorganisms found in almost all environments of Earth. In recent years, the taxonomic placement of some cyanobacterial strains, including those belonging to the genus Nostoc sensu lato, have been reevaluated by means of a polyphasic approach. Thus, 16S rRNA gene phylogeny and 16S–23S internal transcribed spacer (ITS) secondary structures coupled with morphological, ecological and physiological data are considered powerful tools for a better taxonomic and systematics resolution, leading to the description of novel genera and species. Additionally, underexplored and harsh environments, such as saline–alkaline lakes, have received special attention given they can be a source of novel cyanobacterial taxa. Here, a filamentous heterocytous strain, Nostocaceae CCM-UFV059, isolated from Laguna Amarga, Chile, was characterized applying the polyphasic approach; its fatty acid profile and physiological responses to salt (NaCl) were also determined. Morphologically, this strain was related to morphotypes of the Nostoc sensu lato group, being phylogenetically placed into the typical cluster of the genus Desmonostoc. CCM-UFV059 showed identity of the 16S rRNA gene as well as 16S–23S secondary structures that did not match those from known described species of the genus Desmonostoc, as well as distinct ecological and physiological traits. Taken together, these data allowed the description of the first strain of a member of the genus Desmonostoc from a saline–alkaline lake, named Desmonostoc salinum sp. nov., under the provisions of the International Code of Nomenclature for algae, fungi and plants. This finding extends the ecological coverage of the genus Desmonostoc, contributing to a better understanding of cyanobacterial diversity and systematics

Cellular differentiation in Nostoc spp: effects of light intensity and pattern of filaments superposition.

Em isolados do gênero Nostoc, a multiplicação das células vegetativas e a diferenciação de algumas células em heterócitos em intervalos regulares é a etapa do ciclo de vida em que ocorre a produção de biomassa. Em outra etapa do ciclo de vida, vários fatores do ambiente podem induzir a diferenciação de hormogônios, filamentos nos quais não ocorre produção de biomassa. A aplicação biotecnológica de cianobactérias pode ser limitada pela intensificação do auto-sombreamento durante o crescimento destas em foto-biorreatores. Em conseqüência, pode ocorrer diminuição na intensidade e alteração da qualidade espectral da luz que atinge as células. Os objetivos deste trabalho foram: 1) caracterizar a produção de biomassa e de pigmentos por isolados do gênero Nostoc cultivados em diferentes intensidades luminosas; 2) analisar o efeito do pré-cultivo e subseqüente exposição a diferentes intensidades luminosas sobre os mesmos parâmetros e sobre os processos de diferenciação celular e 3) caracterizar durante o cultivo de Nostoc CCLFM XXI em duas intensidades luminosas, a relação das fases de crescimento com os processos de diferenciação celular predominantes. As maiores produções de biomassa foram obtidas a 20, 45 e 75 μmoles m-2 s-1, respectivamente em Nostoc CCLFM I, VIII e XXI. Em Nostoc CCLFM I, apenas a concentração de ficoeritrina variou com a intensidade luminosa, apresentando-se máxima a 15 μmoles m-2 s-1, e diminuindo com aumentos na intensidade luminosa. As concentrações de pigmentos em Nostoc CCLFM VIII não variaram com a intensidade luminosa. As concentrações de ficocianina e aloficocianina, em Nostoc CCLFM XXI, variaram com a intensidade luminosa, atingindo um máximo à 45 μmoles m-2 s-1, e mantendo-se constantes nas maiores intensidades. O pré-cultivo a 15 μmoles m-2 s-1 e exposição às baixas intensidades luminosas levou, em Nostoc CCLFM VIII e XXI a uma intensa diferenciação de acinetos, o que não ocorreu para Nostoc CCLFM I. Quando o pré-cultivo foi realizado a 75 μmoles m-2 s-1, observou-se, em Nostoc CCLFM I e VIII, filamentos com células menores que as células vegetativas, indicativo de diferenciação de hormogônios. Nostoc CCLFM XXI quando cultivado a 15 μmoles m-2 s-1 apresentou intenso padrão de diferenciação de acinetos, ao passo que o cultivo a 60 μmoles m-2 s-1 apresentou distintos padrões de diferenciação celular nas faixas de parada de produção de biomassa. Nas fases iniciais de cultivo houve predominância de hormogônios, e de acinetos nas fases intermediária e final da curva. Desta forma, há uma relação entre intensidade luminosa e diferenciação celular, sendo que as mais baixas levam à diferenciação de acineto. No entanto, em maiores intensidades, observase tanto diferenciação de hormogônios quanto de acinetos, sendo os primeiros observados na primeira parada de produção de biomassa e os acinetos nas faixas mais tardias de parada, indicando uma sequência na ocorrência destes processos relacionada à disponibilidade de energia luminosa adequada à fotossíntese.In Nostoc isolates, the vegetative cells multiplication and differentiation of some of them in heterocyst is the life cycle phase in which biomass production occurs. In other phase, many environmental changes can trigger hormogonium differentiation, a transient and a non-growth state. The use of cyanobacteria strains in biotechnological processes have been studied for many years, however, the production of biomass is influenced, and can be limited, by the fact that the colonies growth intensify the selfshading. Consequently, changes in light intensity and quality received by cells can occur. The aims of this work were: 1) to characterize biomass and pigments production by Nostoc isolates in response to changes in light intensity; 2) to analyze the effect of pre-cultivation and exposure in different light intensities in the same parameters and in cellular differentiation processes; 3) and to relate, for isolate Nostoc CCLFM XXI, growth phases to predominant cellular differentiation processes. The greater biomass production was achieved at 20, 45 and 75 μmoles m-2 s-1, respectively in Nostoc CCLFM I, VIII and XXI. In Nostoc CCLFM I, only phycoerithrin content changed with light intensity, been maximum at 15 μmoles m-2 s-1, decreasing with increasing light intensities. Pigment contents, in Nostoc CCLFM VIII did not vary with light intensities. In Nostoc CCLFM XXI phycocyanin and alophycocyanin contents varied with light intensity, reaching a maximum at 45 μmoles m-2 s-1, been constant up to 105 μmoles m-2 s-1. Biomass pre-cultivated at 15 μmoles m-2 s-1, when exposed to lower light intensities led to an intense akinetes differentiation in Nostoc CCLFM VIII and XXI, fact that did not occur in Nostoc CCLFM I. When biomass pre-cultivated at 75 μmoles m-2 s-1 were exposed to lower light intensities, filaments with smaller cells than vegetative ones were observed, indicating probably, the occurrence of hormogonium differentiation in Nostoc CCLFM I and VIII. When cultivated at 15 μmoles m-2 s-1, Isolate XXI showed intense akinetes differentiation, and when cultivated at 60 μmoles m-2 s-1 it showed distinct cellular differentiation patterns in phases in which biomass production was not observed. Hormogonia were observed only in the early non-growth phase, while akinetes were observed in middle and late non-growth phases. Therefore, there is relation between light intensity and patterns of cellular differentiation. In lowest light intensities the akinetes differentiation predominates over other differentiation process. However, in higher intensity hormogonia and akinetes were observed, with hormogonia associated with the first non-growth phase and akinetes with middle and late nongrowth phase, indicating a sequence in which cellular differentiation occur, probably related with light energy available to photosynthesis.Conselho Nacional de Desenvolvimento Científico e Tecnológic

Cyanobacteria from coastal environment: phylogeny, gene and chemical prospecting of bioactive molecules

O filo Cyanobacteria constitui um grupo filogeneticamente coerente, embora, apresente grande diversidade morfológica, sendo sua sistemática constantemente revisada. Esses micro-organismos são, ainda, alvos de estudos biotecnológicos em razão da produção de toxinas e na busca por substâncias de interesse farmacológico. Dentre as linhagens analisadas neste estudo, sete sequências do gene rRNA 16S foram geradas e avaliadas com sequências previamente obtidas. Ao menos dois grupos podem representar novos gêneros de cianobactérias, sendo que um grupo demonstra ser endêmico de manguezais brasileiros. Os genes de inibidores de proteases, aeuruginosina, cianopeptolina e microviridina, foram detectados e a produção de aeruginosina foi confirmada por LC-MS nos gêneros Cyanobium e Nostoc. Sequências de aminoácidos do precursor de microviridina indicaram a produção de três novas variantes em quinze linhagens de cianobactérias dos gêneros Cyanobium, Synechococcus, Cyanobacterium, Nodosilinea e Nostoc. O potencial genético para produção de cilindrospermopsina (cyrJ) foi confirmado em vinte e seis linhagens. Em cinco linhagens dos gêneros Cyanobium e Nostoc foram encontrados os genes mcyD, mcyE e mcyG, envolvidos na biossíntese de microcistina. A sequência McyG da linhagem Nostoc sp. CENA175 agrupou-se filogeneticamente com outras de linhagens produtoras de microcistina. Os genes sxtA e sxtI, envolvidos na biossíntese de saxitoxina, foram encontrados em nove linhagens dos gêneros Cyanobium, Oxynema, Leptolyngbya, Nodosilinea e Nostoc. A sequência de SxtI da linhagen Leptolyngbya sp. CENA134 apresentou similaridade >= 70 % com proteínas hipotéticas enquanto as de Nostoc sp. CENA159 e Nostoc sp. CENA160 apresentaram similaridade >= 82 % com O-carbamoiltransferase. Na análise filogenética, a sequência de SxtI da linhagem Nostoc sp. 160 agrupou-se com sequências de linhagens produtoras de saxitoxina. Nas análises químicas, a fração 3 do extrato da linhagem Oxynema sp. CENA135 revelou uma substância com características de ácidos graxos poli-insaturados e a fração 2 do extrato da linhagem Nostoc sp. CENA175 apresentou uma estrutura aromática ligada a uma cadeia alifática. Outros três extratos, obtidos das linhagens Cyanobium sp. CENA157, Nodosilinea sp. CENA183 e Nostoc sp. CENA184 mostraram-se promissores quanto à presença de substâncias nitrogenadas. Os ensaios de bioatividade revelaram que 48 % dos extratos metanólicos inibiram o crescimento de ao menos um isolado de bactéria e/ou levedura. Os extratos das linhagens Cyanobium sp. CENA142 e Cyanobacterium sp. CENA169 foram eficientes contra o crescimento de seis bactérias patogênicas. Nos ensaios de inibição de células tumorais, o extrato de DCM da linhagem Cyanobium sp. CENA154 (100 ?gomL-1) inibiu moderadamente culturas de células 3LL. Os extratos etanólicos de Oxynema sp. CENA135 (20 ?gomL-1) e Cyanobium sp. CENA154 (100 ?gomL-1) inibiram as células CT-26. Em ensaios conduzidos com linhagens de células de glioma (U251), câncer de mama (MCF-7) e câncer de pulmão (NCI-H460), o extrato de DCM da linhagem Cyanobium sp. CENA136 inibiu 50 % do crescimento das respectivas células tumorais nas concentrações 7,8; 27,1 e 14,0 ?gomL-1. Desta forma, além de filogeneticamente diversas, as cianobactérias isoladas de ambiente marinho do Estado de São Paulo constituem fonte promissora de inibidores de proteases, cianotoxinas e substância bioativas com ação antibacteriana, antifúngica e antitumoral.The phylum Cyanobacteria is a phylogenetically coherent group, although presenting great diversity, and its systematic have been constantly reviewed. These microorganisms are also targets of biotechnological studies due to the production of toxins and the search for novel substances of pharmacological interest. Among the strains analyzed in this study, sequences of the 16S rRNA gene were generated for seven and, than, analyzed with sequences previously obtained. At least two groups may represent new cyanobacterial genera, while a group of Cyanobium proves to be endemic of Brazilian mangroves. Genes of the proteases inhibitors, aeuruginosin, cyanopeptolin and microviridin, were detected and the production of aeruginosin was confirmed by LC-MS for Nostoc and Cyanobium. The amino acid sequences of microviridin precursor indicated the production of three new variants in fifteen cyanobacterial strains of the genera Cyanobium, Synechococcus, Cyanobacterium, Nostoc and Nodosilinea. The genetic potential for production of cylindrospermopsin (cyrJ) was confirmed in twenty-six strains. In five strains of the genera Nostoc and Cyanobium the mcyD, mcyE and mcyG genes, which are involved in the microcystin biosynthesis, were found. The McyG sequence of Nostoc sp. CENA175 was phylogenetically grouped with sequences of microcystin-producing strains. The sxtA and sxtI genes, from saxitoxin biosynthesis, were found in nine strains of the genera Cyanobium, Oxynema, Leptolyngbya, Nodosilinea and Nostoc. The SxtI sequence of Leptolyngbya sp. CENA134 showed similarity >= 70 % with hypothetical proteins, while the sequences of Nostoc sp. CENA159 and Nostoc sp. CENA160 showed similarity >= 82% with O-carbamoyltransferase. In the phylogenetic analysis, the SxtI sequence of Nostoc sp. CENA160 grouped with sequences of strains that produce saxitoxin. In chemical analysis, the fraction 3 of the Oxynema sp. CENA135 extract revealed a substance with poly-unsaturated fatty acids characteristics and the fraction 2 of Nostoc sp. CENA175 extract indicated an aromatic structure, attached to an aliphatic chain. Other three extracts obtained from Cyanobium sp. CENA157, Nodosilinea sp. CENA183 and Nostoc sp. CENA184 were promising for the presence of nitrogenous substances. Bioactivity assays revealed that 48 % of the methanolic extracts inhibited the growth of at least one isolate of bacteria and/or yeast. The extracts of Cyanobium sp. CENA142 and Cyanobacterium sp. CENA169 were efficient against six pathogenic bacteria. In the inhibition assays of tumor cells, the DCM extract of Cyanobium sp. CENA154 (100 mgomL-1) moderately inhibited the growth of 3LL cells. Ethanol extracts of Oxynema sp. CENA135 (20 mgomL-1) and Cyanobium sp. CENA154 (100 mgomL-1) were able to inhibit cultures of CT- 26 cells. In tests conducted with glioma cell lines (U251), breast cancer (MCF-7) and lung cancer (NCI-H460), the DCM extract of Cyanobium sp. CENA136 caused 50 % of growth inhibition, respectively, when used at concentrations of 7.8, 27.1 and 14.0 mgomL-1. Thus, besides their phylogenetically diversity, the cyanobacteria strains from marine environment of the São Paulo state are a promising source of protease inhibitors, cyanotoxins and bioactive compounds with antibacterial, antifungal and antitumor activities

Phylogenetic insights into the diversity of homocytous cyanobacteria from Amazonian rivers

The Amazon Rainforest holds great tropical biodiversity, mainly because of its favourable climatic conditions. The high temperatures, luminosity and humidity coupled with the nutritional simplicity of cyanobacteria allow undiscovered diversity to flourish within this group of microorganisms. Some efforts to reveal this diversity have been attempted; however, most were focused on the microscopic observation of environmental samples without any genetic information. Very few studies focusing on morphological, ecological and molecular criteria have been conducted, and none have been devoted to homocytous cyanobacteria forms in Amazonia region. Therefore, the genetic relationships amongst strains retrieved from this ecosystem with regard to other environments from Brazil and the world have not been tested and, consequently, the Amazonian strains would naturally be assumed as novel to science. To examine these relationships, cultured homocytous cyanobacteria isolated from two Amazonian rivers (Amazonas and Solimões) were evaluated using a phylogenetic perspective, considering the 16S rRNA gene sequence. A total of eleven homocytous cyanobacterial strains were isolated. Morphologically, they were identified as Pseudanabaena, Leptolyngbya, Planktothrix and Phormidium, but genetically they were included in the typical clusters of Planktothrix, Pseudanabaena, Cephalothrix, Pantanalinema and Alkalinema. These three latter genera have been detected in other Brazilian ecosystems only (Pantanal, Atlantic Rainforest and Pampa), while those remaining have been extensively found in many parts of the world. The data provided here indicate that Amazonian rivers support a homocytous cyanobacterial diversity previously reported from other geographical and ecological environments

Heterocyte-forming cyanobacteria from Brazilian saline-alkaline lakes

Studies investigating the diversity of cyanobacteria from tropical environments are scarce, especially those devoted to the isolation and molecular characterization of the isolated strains. Among the Brazilian biomes, Pantanal has mainly been examined through microscopic observation of environmental samples, resulting in lists of morphotypes without any genetic information. Recently, two studies were conducted evaluating the morphologic and genetic diversity of cultured non-heterocytous cyanobacteria in this biome, which resulted in the separation and description of two novel genera. In order to complement the diversity of cultured cyanobacteria from saline-alkaline lakes in Pantanal, the present study is dedicated to the examination of cultured nitrogen-fixing heterocytous cyanobacteria from this extreme and underexplored environment. A total of fourteen cyanobacterial strains were isolated. According to morphological examination they belong to the order Nostocales and to the subsections IV.I and IV.II, according to the International Code of Nomenclature for Algae, Fungi and Plants and the Bergey’s Manual of Systematic Bacteriology, respectively. Phylogenetic evaluation of their 16S rRNA gene sequences resulted in the formation of five clusters. Among them, one is clearly related to the genus Anabaenopsis whilst the remaining clusters may represent new genetic lineages. These novel sequences aid in the delimitation of problematic groups, especially those containing sequences belonging to mixed genera. The application of both morphologic and phylogenetic studies has proven to be an important tool in resolving problematic groups in cyanobacteria systematics. This strategy is essential in order to detect novel cyanobacteria genera from other tropical environments

Cyanobacterial nitrogenases: phylogenetic diversity, regulation and functional predictions

Abstract Cyanobacteria is a remarkable group of prokaryotic photosynthetic microorganisms, with several genera capable of fixing atmospheric nitrogen (N2) and presenting a wide range of morphologies. Although the nitrogenase complex is not present in all cyanobacterial taxa, it is spread across several cyanobacterial strains. The nitrogenase complex has also a high theoretical potential for biofuel production, since H2 is a by-product produced during N2 fixation. In this review we discuss the significance of a relatively wide variety of cell morphologies and metabolic strategies that allow spatial and temporal separation of N2 fixation from photosynthesis in cyanobacteria. Phylogenetic reconstructions based on 16S rRNA and nifD gene sequences shed light on the evolutionary history of the two genes. Our results demonstrated that (i) sequences of genes involved in nitrogen fixation (nifD) from several morphologically distinct strains of cyanobacteria are grouped in similarity with their morphology classification and phylogeny, and (ii) nifD genes from heterocytous strains share a common ancestor. By using this data we also discuss the evolutionary importance of processes such as horizontal gene transfer and genetic duplication for nitrogenase evolution and diversification. Finally, we discuss the importance of H2 synthesis in cyanobacteria, as well as strategies and challenges to improve cyanobacterial H2 production

Physiological and thylakoid ultrastructural changes in cyanobacteria in response to toxic manganese concentrations

In this study, two cyanobacterial strains (morphologically identified as Microcystis novacekii BA005 and Nostoc paludosum BA033) were exposed to different Mn concentrations: 7.0, 10.5, 15.7, 23.6 and 35.4 mg L−1 for BA005; and 15.0, 22.5, 33.7, 50.6, and 76.0 mg L−1 for BA033. Manganese toxicity was assessed by growth rate inhibition (EC50), chlorophyll a content, quantification of Mn accumulation in biomass and monitoring morphological and ultrastructural effects. The Mn EC50 values were 16 mg L−1 for BA005 and 39 mg L−1 for BA033, respectively. Reduction of chlorophyll a contents and ultrastructural changes were observed in cells exposed to Mn concentrations greater than 23.6 and 33.7 mg L−1 for BA005 and BA033. Damage to intrathylakoid spaces, increased amounts of polyphosphate granules and an increased number of carboxysomes were observed in both strains. In the context of the potential application of these strains in bioremediation approaches, BA005 was able to remove Mn almost completely from aqueous medium after 96 h exposure to an initial concentration of 10.5 mg L−1, and BA033 was capable of removing 38% when exposed to initial Mn concentration of 22.5 mg L−1. Our data shed light on how these cyanobacterial strains respond to Mn stress, as well as supporting their utility as organisms for monitoring Mn toxicity in industrial wastes and potential bioremediation application

Pantanalinema gen. nov. and Alkalinema gen. nov.: novel pseudanabaenacean genera (Cyanobacteria) isolated from saline-alkaline lakes

International audienceThe genus Leptolyngbya Anagnostidis & Komárek (1988) was described from a set of strains identified as "LPP-group B". The morphology within this group is not particularly informative and underestimates the group's genetic diversity. In the present study, two new pseudanabaenacean genera related to Leptolyngbya morphotypes, Pantanalinema gen. nov. and Alkalinema gen. nov., are described under the provisions of the International Code of Nomenclature for algae, fungi, and plants, based on a polyphasic approach. Pantanalinema gen. nov. has sheaths and trichomes with slight gliding motility, which distinguish this genus from Alkalinema gen. nov., that possesses trichomes arranged in an ornate (interwoven) pattern. Pantanalinema and Alkalinema 16S rRNA gene sequences exhibited low identity compared to each other (≤ 91.6 %) and compared to other sequences from known pseudanabaenacean genera (≤ 94.3 and 93.7 %, respectively). In a phylogenetic reconstruction, six Pantanalinema and four Alkalinema sequences formed two separate and robust clades (99 % of bootstrap value), with the genera Oculatella and Phormidesmis, respectively, as the closest related groups. Intergenic spacer (ITS) sequences and secondary structures of Pantanalinema and Alkalinema did not correspond to any previous descriptions. The Pantanalinema and Alkalinema strains were able to survive and produce biomass at a range of pH values (4-11) and were also able to alter the culture medium to pH values ranging from 8.40-9.9. These data indicate that cyanobacterial communities in underexplored environments, such as the Pantanal wetlands, are promising sources of novel taxa