148 research outputs found
The numerical solution of forward–backward differential equations: Decomposition and related issues
NOTICE: this is the author’s version of a work that was accepted for publication in Journal of computational and applied mathematics. Changes resulting from the publishing process, such as peer review, editing, corrections, structural formatting, and other quality control mechanisms may not be reflected in this document. Changes may have been made to this work since it was submitted for publication. A definitive version was subsequently published in Journal of computational and applied mathematics, 234,(2010), doi: 10.1016/j.cam.2010.01.039This journal article discusses the decomposition, by numerical methods, of solutions to mixed-type functional differential equations (MFDEs) into sums of “forward” solutions and “backward” solutions
Global Hopf bifurcation in the ZIP regulatory system
Regulation of zinc uptake in roots of Arabidopsis thaliana has recently been
modeled by a system of ordinary differential equations based on the uptake of
zinc, expression of a transporter protein and the interaction between an
activator and inhibitor. For certain parameter choices the steady state of this
model becomes unstable upon variation in the external zinc concentration.
Numerical results show periodic orbits emerging between two critical values of
the external zinc concentration. Here we show the existence of a global Hopf
bifurcation with a continuous family of stable periodic orbits between two Hopf
bifurcation points. The stability of the orbits in a neighborhood of the
bifurcation points is analyzed by deriving the normal form, while the stability
of the orbits in the global continuation is shown by calculation of the Floquet
multipliers. From a biological point of view, stable periodic orbits lead to
potentially toxic zinc peaks in plant cells. Buffering is believed to be an
efficient way to deal with strong transient variations in zinc supply. We
extend the model by a buffer reaction and analyze the stability of the steady
state in dependence of the properties of this reaction. We find that a large
enough equilibrium constant of the buffering reaction stabilizes the steady
state and prevents the development of oscillations. Hence, our results suggest
that buffering has a key role in the dynamics of zinc homeostasis in plant
cells.Comment: 22 pages, 5 figures, uses svjour3.cl
Tropical polyhedra are equivalent to mean payoff games
We show that several decision problems originating from max-plus or tropical
convexity are equivalent to zero-sum two player game problems. In particular,
we set up an equivalence between the external representation of tropical convex
sets and zero-sum stochastic games, in which tropical polyhedra correspond to
deterministic games with finite action spaces. Then, we show that the winning
initial positions can be determined from the associated tropical polyhedron. We
obtain as a corollary a game theoretical proof of the fact that the tropical
rank of a matrix, defined as the maximal size of a submatrix for which the
optimal assignment problem has a unique solution, coincides with the maximal
number of rows (or columns) of the matrix which are linearly independent in the
tropical sense. Our proofs rely on techniques from non-linear Perron-Frobenius
theory.Comment: 28 pages, 5 figures; v2: updated references, added background
materials and illustrations; v3: minor improvements, references update
Numerical investigation of noise induced changes to the solution behaviour of the discrete FitzHugh-Nagumo equation
In this work we introduce and analyse a stochastic functional equation, which contains both delayed and advanced arguments. This equation results from adding a stochastic term to the discrete FitzHugh-Nagumo equation which arises in mathematical models of nerve conduction. A numerical method is introduced to compute approximate solutions and some numerical experiments are carried out to investigate their dynamical behaviour and compare them with the solutions of the corresponding deterministic equation
Finding periodic orbits in state-dependent delay differential equations as roots of algebraic equations
In this paper we prove that periodic boundary-value problems (BVPs) for delay
differential equations are locally equivalent to finite-dimensional algebraic
systems of equations. We rely only on regularity assumptions that follow those
of the review by Hartung et al. (2006). Thus, the equivalence result can be
applied to differential equations with state-dependent delays (SD-DDEs),
transferring many results of bifurcation theory for periodic orbits to this
class of systems. We demonstrate this by using the equivalence to give an
elementary proof of the Hopf bifurcation theorem for differential equations
with state-dependent delays. This is an alternative and extension to the
original Hopf bifurcation theorem for SD-DDEs by Eichmann (2006).Comment: minor revision, correcting mistakes in formulation of Lemma 2.3 and
A.5 (which are also present in the Journal paper): center of neighborhood
must be in , which is the case for the main theore
A striking correspondence between the dynamics generated by the vector fields and by the scalar parabolic equations
The purpose of this paper is to enhance a correspondence between the dynamics
of the differential equations on and those
of the parabolic equations on a bounded
domain . We give details on the similarities of these dynamics in the
cases , and and in the corresponding cases ,
and dim() respectively. In addition to
the beauty of such a correspondence, this could serve as a guideline for future
research on the dynamics of parabolic equations
Pushed traveling fronts in monostable equations with monotone delayed reaction
We study the existence and uniqueness of wavefronts to the scalar
reaction-diffusion equations with monotone delayed reaction term and . We are mostly interested in the situation when the graph of is not
dominated by its tangent line at zero, i.e. when the condition , is not satisfied. It is well known that, in such a case, a
special type of rapidly decreasing wavefronts (pushed fronts) can appear in
non-delayed equations (i.e. with ). One of our main goals here is to
establish a similar result for . We prove the existence of the minimal
speed of propagation, the uniqueness of wavefronts (up to a translation) and
describe their asymptotics at . We also present a new uniqueness
result for a class of nonlocal lattice equations.Comment: 17 pages, submitte
Monotone and near-monotone biochemical networks
Monotone subsystems have appealing properties as components of larger networks, since they exhibit robust dynamical stability and predictability of responses to perturbations. This suggests that natural biological systems may have evolved to be, if not monotone, at least close to monotone in the sense of being decomposable into a “small” number of monotone components, In addition, recent research has shown that much insight can be attained from decomposing networks into monotone subsystems and the analysis of the resulting interconnections using tools from control theory. This paper provides an expository introduction to monotone systems and their interconnections, describing the basic concepts and some of the main mathematical results in a largely informal fashion
Traveling waves and pattern formation for spatially discrete bistable reaction-diffusion equations (survey)
Analysis and Stochastic
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