Rethinking the dynamics of capital accumulation in colonial and post-colonial Indonesia: Production Regulation

This thesis explores the forces driving a series of momentous transformations to Indonesia�s production and distribution systems since early colonial rule. The analysis of these forces is anchored in four conceptual themes: the basis of these systemic transformations, their politico-economic ordering as driven by a surplus-creation imperative, labour�s role in this imperative and its response to the �ordering�, and the mode of production as the historical setting within which the transformations occur. This thesis illuminates an analytical gap in the literature by nominating labour as the key force in wealth-creation and recognising its active role in challenging ruling appropriation regimes and in the broader social struggles against exploitation and oppression. The thematic focus defines the boundaries for an exploration of successive colonial and post-colonial ruling regimes. Early chapters examine how the Dutch penetrated the Indonesian politico-economy, entrenching their systems of production organisation and creating an exclusionary system of wealth appropriation. Appropriation systems are characterised by transitions in European political and economic systems, especially from mercantilism to industrial capitalism. The entrenchment of colonial power is considered in relation to the expansion of capitalist organisation in Indonesia. The state�s stimulation of this expansion is associated with an undermining of the country�s reproductive base and a growing challenge to foreign rule. The Japanese occupying force� demolition of colonial productive and distributive linkages and encouragement of independence activism is connected with a post-war struggle for independence. Links are drawn between colonial rule and the tensions and organisational difficulties faced by Republican regimes leading up to the New Order�s re-establishment of a strict regulatory regime, and the development of an indigenous system of capitalist organisation. The surplus-generation and appropriation perspective informs the evolution of Indonesia�s productive and economic systems across colonial and post-colonial epochs and the challenges to the system of social and production regulation that heralded the destabilisation of New Order rule and the rise of the contemporary era of political democracy

Evaluation of the Conflict Prevention Pools: Strengthening the United Nations.

yesP5. The evaluation was undertaken by Bradford University, Channel Research Ltd, the PARC & Associated Consultants. The United Nations (UN) Case study was carried out by Mr Pierre Robert with Professor Andrew Mack. The study was carried out through documentary review and interviews with members of the UN GCPP Steering Committee, other London-based officials, UK officials and other stakeholders in other case study countries, staff from the UK¿s UN Mission in New York (UKMIS) and with senior staff at the UN and at other relevant institutions involved in managing projects funded under the Strategy.1 The main evaluator also drew on experience from having evaluated a specific GCPP UN Strategy project, the Early Warning and Preventative Measures (EWPM) training, implemented by the UN System Staff College, early in 2003. P7. The UN Case Study is one of six studies undertaken within the framework of the evaluation of the Conflict Prevention Pools. In accordance with the Terms of Reference (ToRs) and the Inception Report, the Evaluation placed maximum emphasis on the macro level: the policy processes in Whitehall by which decisions on allocations are made and implemented by the CPPs. Considerable attention has also been placed on the meso level: the degree to which CPP policies and activities in a given conflict form part of a coherent package of direct interventions by the international community and local actors to the problems of particular large scale deadly conflicts or potential conflicts. The microlevel of analysis (review of specific projects) confines itself largely to the way in which projects impact on the meso and macro levels. The Evaluation has not analysed systematically whether specific projects funded by the CPPs have been well managed and whether they have achieved their specific project goals. Single projects have been analysed to the extent that they reflect on the macro and meso levels. P8. The main findings of the evaluation, reflected in this Synthesis Report, are that the CPPs are doing significant work funding worthwhile activities that make positive contributions to effective conflict prevention, although it is far too early in the day to assess impact. The progress achieved through the CPP mechanisms is significant enough to justify their continuation

Marsupials and rodents of the Admiralty Islands, Papua New Guinea

We provide the first account of all non-volant, non-marine mammals recorded, whether reliably, questionably, or erroneously, from the Admiralty Islands, Papua New Guinea. Species recorded with certainty, or near certainty, are the bandicoot Echymipera cf. kalubu, the widespread cuscus Phalanger orientalis, the endemic (?) cuscus Spilocuscus kraemeri, the endemic rat Melomys matambuai, a recently described species of endemic Rattus, R. detentus, and the commensal rodents Rattus exulans and Rattus rattus. Species erroneously reported from the islands or whose presence has yet to be confirmed are the rats Melomys bougainville, Rattus mordax, Rattus praetor, and Uromys neobrittanicus. Included additional specimens to those previously reported in the literature are of Spilocuscus kraemeri and two new specimens of the endemic Melomys matambuai, previously known only from the holotype and a paratype, and new specimens of Rattus exulans. The identity of a specimen previously thought to be of Spilocuscus kraemeri and said to have been taken on Bali, an island off the coast of West New Britain, does appear to be of that species, although this animal is generally thought of as occurring only in the Admiralties and vicinity. Summaries from the literature and new information are provided on the morphology, variation, natural history, and zoogeography of the species treated

WFPC2 Observations of the Hubble Deep Field-South

The Hubble Deep Field-South observations targeted a high-galactic-latitude field near QSO J2233-606. We present WFPC2 observations of the field in four wide bandpasses centered at roughly 300, 450, 606, and 814 nm. Observations, data reduction procedures, and noise properties of the final images are discussed in detail. A catalog of sources is presented, and the number counts and color distributions of the galaxies are compared to a new catalog of the HDF-N that has been constructed in an identical manner. The two fields are qualitatively similar, with the galaxy number counts for the two fields agreeing to within 20%. The HDF-S has more candidate Lyman-break galaxies at z > 2 than the HDF-N. The star-formation rate per unit volume computed from the HDF-S, based on the UV luminosity of high-redshift candidates, is a factor of 1.9 higher than from the HDF-N at z ~ 2.7, and a factor of 1.3 higher at z ~ 4.Comment: 93 pages, 25 figures; contains very long table

KELT-6b: A P~7.9 d Hot Saturn Transiting a Metal-Poor Star with a Long-Period Companion

We report the discovery of KELT-6b, a mildly-inflated Saturn-mass planet transiting a metal-poor host. The initial transit signal was identified in KELT-North survey data, and the planetary nature of the occulter was established using a combination of follow-up photometry, high-resolution imaging, high-resolution spectroscopy, and precise radial velocity measurements. The fiducial model from a global analysis including constraints from isochrones indicates that the V=10.38 host star (BD+31 2447) is a mildly evolved, late-F star with T_eff=6102 \pm 43 K, log(g_*)=4.07_{-0.07}^{+0.04} and [Fe/H]=-0.28 \pm 0.04, with an inferred mass M_*=1.09 \pm 0.04 M_sun and radius R_star=1.58_{-0.09}^{+0.16} R_sun. The planetary companion has mass M_P=0.43 \pm 0.05 M_J, radius R_P=1.19_{-0.08}^{+0.13} R_J, surface gravity log(g_P)=2.86_{-0.08}^{+0.06}, and density rho_P=0.31_{-0.08}^{+0.07} g~cm^{-3}. The planet is on an orbit with semimajor axis a=0.079 \pm 0.001 AU and eccentricity e=0.22_{-0.10}^{+0.12}, which is roughly consistent with circular, and has ephemeris of T_c(BJD_TDB)=2456347.79679 \pm 0.00036 and P=7.845631 \pm 0.000046 d. Equally plausible fits that employ empirical constraints on the host star parameters rather than isochrones yield a larger planet mass and radius by ~4-7%. KELT-6b has surface gravity and incident flux similar to HD209458b, but orbits a host that is more metal poor than HD209458 by ~0.3 dex. Thus, the KELT-6 system offers an opportunity to perform a comparative measurement of two similar planets in similar environments around stars of very different metallicities. The precise radial velocity data also reveal an acceleration indicative of a longer-period third body in the system, although the companion is not detected in Keck adaptive optics images.Comment: Published in AJ, 17 pages, 15 figures, 6 table

The Hubble Deep Field South Flanking Fields

As part of the Hubble Deep Field South program, a set of shorter 2-orbit observations were obtained of the area adjacent to the deep fields. The WFPC2 flanking fields cover a contiguous solid angle of 48 square arcminutes. Parallel observations with the STIS and NICMOS instruments produce a patchwork of additional fields with optical and near-infrared (1.6 micron) response. Deeper parallel exposures with WFPC2 and NICMOS were obtained when STIS observed the NICMOS deep field. These deeper fields are offset from the rest, and an extended low surface brightness object is visible in the deeper WFPC2 flanking field. In this data paper, which serves as an archival record of the project, we discuss the observations and data reduction, and present SExtractor source catalogs and number counts derived from the data. Number counts are broadly consistent with previous surveys from both ground and space. Among other things, these flanking field observations are useful for defining slit masks for spectroscopic follow-up over a wider area around the deep fields, for studying large-scale structure that extends beyond the deep fields, for future supernova searches, and for number counts and morphological studies, but their ultimate utility will be defined by the astronomical community.Comment: 46 pages, 15 figures. Images and full catalogs available via the HDF-S at http://www.stsci.edu/ftp/science/hdfsouth/hdfs.html at present. The paper is accepted for the February 2003 Astronomical Journal. Full versions of the catalogs will also be available on-line from AJ after publicatio

Methods for Obtaining and Analyzing Whole Chloroplast Genome Sequences

During the past decade there has been a rapid increase in our understanding of plastid genome organization and evolution due to the availability of many new completely sequenced genomes. Currently there are 43 complete genomes published and ongoing projects are likely to increase this sampling to nearly 200 genomes during the next five years. Several groups of researchers including ours have been developing new techniques for gathering and analyzing entire plastid genome sequences and details of these developments are summarized in this chapter. The most important recent developments that enhance our ability to generate whole chloroplast genome sequences involve the generation of pure fractions of chloroplast genomes by whole genome amplification using rolling circular amplification, cloning genomes into Fosmid or BAC vectors, and the development of an organellar annotation program (DOGMA). In addition to providing details of these methods, we provide an overview of methods for analyzing complete plastid genome sequences for repeats and gene content, as well as approaches for using gene order and sequence data for phylogeny reconstruction. This explosive increase in the number of sequenced plastid genomes and improved computational tools will provide many insights into the evolution of these genomes and much new data for assessing relationships at deep nodes in plants and other photosynthetic organisms

Genomic heterogeneity underlies multidrug resistance in Pseudomonas aeruginosa: A population-level analysis beyond susceptibility testing.

BACKGROUND: Pseudomonas aeruginosa is a persistent and difficult-to-treat pathogen in many patients, especially those with Cystic Fibrosis (CF). Herein, we describe a longitudinal analysis of a series of multidrug resistant (MDR) P. aeruginosa isolates recovered in a 17-month period, from a young female CF patient who underwent double lung transplantation. Our goal was to understand the genetic basis of the observed resistance phenotypes, establish the genomic population diversity, and define the nature of sequence evolution over time. METHODS: Twenty-two sequential P. aeruginosa isolates were obtained within a 17-month period, before and after a double-lung transplant. At the end of the study period, antimicrobial susceptibility testing, whole genome sequencing (WGS), phylogenetic analyses and RNAseq were performed in order to understand the genetic basis of the observed resistance phenotypes, establish the genomic population diversity, and define the nature of sequence changes over time. RESULTS: The majority of isolates were resistant to almost all tested antibiotics. A phylogenetic reconstruction revealed 3 major clades representing a genotypically and phenotypically heterogeneous population. The pattern of mutation accumulation and variation of gene expression suggested that a group of closely related strains was present in the patient prior to transplantation and continued to change throughout the course of treatment. A trend toward accumulation of mutations over time was observed. Different mutations in the DNA mismatch repair gene mutL consistent with a hypermutator phenotype were observed in two clades. RNAseq performed on 12 representative isolates revealed substantial differences in the expression of genes associated with antibiotic resistance and virulence traits. CONCLUSIONS: The overwhelming current practice in the clinical laboratories setting relies on obtaining a pure culture and reporting the antibiogram from a few isolated colonies to inform therapy decisions. Our analyses revealed significant underlying genomic heterogeneity and unpredictable evolutionary patterns that were independent of prior antibiotic treatment, highlighting the need for comprehensive sampling and population-level analysis when gathering microbiological data in the context of CF P. aeruginosa chronic infection. Our findings challenge the applicability of antimicrobial stewardship programs based on single-isolate resistance profiles for the selection of antibiotic regimens in chronic infections such as CF

US Cosmic Visions: New Ideas in Dark Matter 2017: Community Report

This white paper summarizes the workshop "U.S. Cosmic Visions: New Ideas in Dark Matter" held at University of Maryland on March 23-25, 2017.Comment: 102 pages + reference

The Astropy Problem

The Astropy Project (http://astropy.org) is, in its own words, "a community effort to develop a single core package for Astronomy in Python and foster interoperability between Python astronomy packages." For five years this project has been managed, written, and operated as a grassroots, self-organized, almost entirely volunteer effort while the software is used by the majority of the astronomical community. Despite this, the project has always been and remains to this day effectively unfunded. Further, contributors receive little or no formal recognition for creating and supporting what is now critical software. This paper explores the problem in detail, outlines possible solutions to correct this, and presents a few suggestions on how to address the sustainability of general purpose astronomical software