Breeding for improved nitrogen use efficiency in oilseed rape

Oilseed rape has a high requirement for nitrogen (N) fertiliser relative to its seed yield. This paper uses published and unpublished work to explore the extent to which the N use efficiency (seed yield ÷ N supply) of oilseed rape could be improved without reducing seed yield. It was estimated that if the concentration of N in the stem and pod wall at crop maturity could be reduced from 1.0 to 0.6%, the root length density increased to 1 cm/cm3 to 100 cm soil depth and the post flowering N uptake increased by 20 kg N/ha then the fertiliser requirement could be reduced from 191 to 142 kg N/ha and the N use efficiency could be increased from 15.2 to 22.4 kg of seed dry matter per kg N. Genetic variation was found for all of the traits that were estimated to be important for N use efficiency. This indicates that there is significant scope for plant breeders to reduce N use efficiency in oilseed rape

Optimizing dry-matter partitioning for increased spike growth, grain number and harvest index in spring wheat

Improving biomass is an important goal for future genetic gains in yield potential in wheat, but it will also be crucial to identify physiological traits to maximize harvest index (HI, proportion of aboveground biomass in grain). Increased grain partitioning will require increased dry-matter (DM) partitioning to the spikes at anthesis as well as enhanced fruiting efficiency (FE, grains per g spike dry matter at anthesis or chaff dry matter at harvest), whilst optimizing the partitioning amongst the non-grain components to maintain post-anthesis photosynthetic capacity and soluble carbohydrate translocation. The objectives of this study were to: i) quantify genetic variation in DM partitioning among plant organs at anthesis (GS65) + 7days and associations with spike growth and FE and ii) identify optimized partitioning traits associated with enhanced HI and grain yield, in CIMMYT elite spring wheat backgrounds. Two field experiments were conducted in 2011-12 and 2012-13 testing 26 CIMMYT spring wheat cultivars in NW Mexico in irrigated conditions in which DM partitioning was assessed in plant organs at anthesis + 7 days, and within-spike (glume, palea, lemma, rachis and awn) partitioning was assessed at harvest. Grain yield, yield components, HI and FE were assessed at harvest. Our results identified new traits for HI (decreased DM partitioning to stem internodes 2 (top down, peduncle-1) and 3, and decreased rachis DM partitioning and rachis specific weight (rachis DM per rachis unit length) and increased lemma DM partitioning), potentially allowing breeders to maximize the exploitation of enhanced carbon assimilation for grain biomass. Further work will focus on understanding the role of soluble carbohydrate re-translocation in these relationships and establishing high-throughput and cost-effective phenotyping methods for these traits for deployment in breeding

Identifying variation for N-use efficiency and associated traits in amphidiploids derived from hybrids of bread wheat and the genera Aegilops, Secale, Thinopyrum and Triticum

Future genetic progress in wheat grain yield will depend on increasing biomass and this must be achieved without commensurate increases in nitrogen (N) fertilizer inputs to minimize environmental impacts. In recent decades there has been a loss of genetic diversity in wheat through plant breeding. However, new genetic diversity can be created by incorporating genes into bread wheat from wild wheat relatives. Our objectives were to investigate amphidiploids derived from hybrids of bread wheat (Triticum aestivum L.) and related species from the genera Aegilops, Secale, Thinopyrum and Triticum for expression of higher biomass, N-use efficiency (NUE) and leaf photosynthesis rate compared to their bread wheat parents under high and low N conditions. Eighteen amphidiploid lines and their bread wheat parents were examined in high N (HN) and low N (LN) treatments under glasshouse conditions in two years. Averaged across years, grain yield reduced by 38% under LN compared to HN conditions (P = 0.004). Three amphidiploid lines showed positive transgressive segregation compared to their bread wheat parent for biomass per plant under HN conditions. Positive transgressive segregation was also identified for flag-leaf photosynthesis both pre-anthesis and post-anthesis under HN and LN conditions. For N uptake per plant at maturity positive transgressive segregation was identified for one amphidiploid line under LN conditions. Our results indicated that introgressing traits from wild relatives into modern bread wheat germplasm offers scope to raise biomass and N-use effciency in both optimal and low N availability environments

Exploring genetic diversity for grain partitioning traits to enhance yield in a high biomass spring wheat panel

© 2020 Breeding to raise yield potential through enhancing photosynthesis will have limited impact unless harvest index (HI: proportion of above-ground biomass as grain yield) is maintained or ideally increased. Boosting grain dry matter (DM) partitioning will require increased allocation of assimilates to sink organs to enhance spike growth. A high biomass spring wheat panel of 150 genotypes encompassing elite, landrace-derived and synthetic-derived lines was grown under yield potential conditions in two seasons in NW Mexico. Results showed that the incorporation of landrace-derived and synthetic-derived backgrounds into elite lines resulted in higher expression of above-ground biomass (AGDM), leaf lamina and stem DM partitioning at anthesis. However, no grain yield advantage was observed over elite lines, due to lower grain number per unit area (GN) and decreased harvest index (HI). Positive linear associations were found among spike fertility-related traits - fruiting efficiency (grains per unit of spike DM at anthesis; FE), GN and HI - which were, in turn, related positively with grain yield (GY). Stem-internode 3 length and internode 3 DM partioning were negatively associated with spike partitioning index (SPI: ratio of spike DM to total above-ground DM at anthesis) and GN, suggesting an enhanced competition for assimilates between the spike and stem internode 3 during stem elongation. Within-spike DM partitioning analysis (glume, lemma, palea, rachis, awn) showed decreased partitioning to awns was associated with increased FE and thousand grain weight (TGW). While the use of exotic material can enhance biomass, special attention needs to be paid in the selection for novel DM partitioning traits that raise HI and GN coming from the elite genepool. The selection for grain partitioning traits in wheat breeding combined with sources expressing high biomass can potentially allow breeders to increase grain carbon assimilation that will deliver higher yields

Linear discriminant analysis reveals differences in root architecture in wheat seedlings by nitrogen uptake efficiency

Root architecture impacts water and nutrient uptake efficiency. Identifying exactly which root architectural properties influence these agronomic traits can prove challenging. In this paper approximately 300 wheat plants were divided into four groups using two binary classifications, high vs. low nitrogen uptake efficiency (NUpE), and high vs. low nitrate in medium. The root system architecture for each wheat plant was captured using 16 quantitative variables. The multivariate analysis tool, linear discriminant analysis, was used to construct composite variables, each a linear combination of the original variables, such that the score of the wheat plants on the new variables showed the maximum between-group variability. The results show that the distribution of root system architecture traits differ between low and high NUpE wheat plants and, less strongly, between low NUpE wheat plants grown on low vs. high nitrate media

A ‘wiring diagram’ for source strength traits impacting wheat yield potential

Source traits are currently of great interest for the enhancement of yield potential; for example, much effort is being expended to find ways of modifying photosynthesis. However, photosynthesis is but one component of crop regulation, so sink activities and the coordination of diverse processes throughout the crop must be considered in an integrated, systems approach. A set of ‘wiring diagrams’ has been devised as a visual tool to integrate the interactions of component processes at different stages of wheat development. They enable the roles of chloroplast, leaf, and whole-canopy processes to be seen in the context of sink development and crop growth as a whole. In this review, we dissect source traits both anatomically (foliar and non-foliar) and temporally (pre- and post-anthesis), and consider the evidence for their regulation at local and whole-plant/crop levels. We consider how the formation of a canopy creates challenges (self-occlusion) and opportunities (dynamic photosynthesis) for components of photosynthesis. Lastly, we discuss the regulation of source activity by feedback regulation. The review is written in the framework of the wiring diagrams which, as integrated descriptors of traits underpinning grain yield, are designed to provide a potential workspace for breeders and other crop scientists that, along with high-throughput and precision phenotyping data, genetics, and bioinformatics, will help build future dynamic models of trait and gene interactions to achieve yield gains in wheat and other field crops.Research of the authors on physiology and genetics of wheat yield potential has been funded by many different sources over the years. Recent grants include the International Wheat Yield Partnership (IWYP) projects funded by the Biotechnology and Biological Research Council of the UK [BB/N021061/1, BB/ N020871/2, BB/S005072/1] (IWYP48, IWYP64, IWYP163 and IWYP25FP, respectively), as well as projects funded by other donors (State Research Agency of Spain: AGL2015-69595-R and RTI2018-096213-B-100)

Prediction of Photosynthetic, Biophysical, and Biochemical Traits in Wheat Canopies to Reduce the Phenotyping Bottleneck

To achieve food security, it is necessary to increase crop radiation use efficiency (RUE) and yield through the enhancement of canopy photosynthesis to increase the availability of assimilates for the grain, but its study in the field is constrained by low throughput and the lack of integrative measurements at canopy level. In this study, partial least squares regression (PLSR) was used with high-throughput phenotyping (HTP) data in spring wheat to build predictive models of photosynthetic, biophysical, and biochemical traits for the top, middle, and bottom layers of wheat canopies. The combined layer model predictions performed better than individual layer predictions with a significance as follows for photosynthesis R2 = 0.48, RMSE = 5.24 μmol m–2 s–1 and stomatal conductance: R2 = 0.36, RMSE = 0.14 mol m–2 s–1. The predictions of these traits from PLSR models upscaled to canopy level compared to field observations were statistically significant at initiation of booting (R2 = 0.3, p < 0.05; R2 = 0.29, p < 0.05) and at 7 days after anthesis (R2 = 0.15, p < 0.05; R2 = 0.65, p < 0.001). Using HTP allowed us to increase phenotyping capacity 30-fold compared to conventional phenotyping methods. This approach can be adapted to screen breeding progeny and genetic resources for RUE and to improve our understanding of wheat physiology by adding different layers of the canopy to physiological modeling

Associations between endogenous spike cytokinins and grain-number traits in spring wheat genotypes

Genetic variation in grain number has been positively associated with levels of cytokinins in inflorescences in cereals, although studies quantifying endogenous levels in the field are currently lacking. The present study, using a spring wheat association mapping panel (HiBAP II) of 150 lines, quantified associations between spike hormone levels and grain number and associated traits. The HiBAP II panel was grown in the field in NW Mexico under irrigated conditions for one year and a subset of ten genotypes in the glasshouse under well-watered conditions for three years. The spike levels of four cytokinins (trans-zeatin riboside, trans-zeatin, isopentenyladenosine, and isopentenyladenine) were measured by using ultra-high-performance liquid chromatography coupled with electrospray ionization tandem mass spectrometry. In the glasshouse experiments, spike hormone levels were measured at booting and anthesis, and in the field experiment at anthesis. In the glasshouse experiments, cytokinin levels were also measured in the basal, central, and apical spikelets separately in addition to at the whole spike level. The spike cytokinin levels did not differ significantly between the basal, central and apical sections of the spike. or show a spike position × genotype interaction. In the glasshouse experiments, significant genetic variation was detected for the expression of the four cytokinins in spikes at booting. At booting, spike trans-zeatin concentration ranged amongst genotypes from 4.5 to 16.0 ng g−1 FW and was positively correlated with grain number per main shoot (r = 0.77, P < 0.05). In the field at anthesis, the spike levels of each of trans-zeatin, trans-zeatin riboside and isopentenyl adenosine were positively correlated with grains per m2 (r = 0.17–0.19, P < 0.05). Our results indicated that selection for high spike cytokinin levels in wheat germplasm offers scope to raise grain number and yield potential in wheat

Leaf photosynthesis and associations with grain yield, biomass and nitrogen-use efficiency in landraces, synthetic-derived lines and cultivars in wheat

Future genetic progress in wheat grain yield will depend on increasing above-ground biomass and this must be achieved without commensurate increases in N fertilizer inputs to minimise environmental impacts. Our objective was to quantify variation in grain yield, above-ground biomass and N-use efficiency (NUE) and associated traits in a panel of diverse hexaploid wheat germplasm comprising: (i) landraces from the AE Watkins collection, (ii) synthetic-derived hexaploid lines in a cv. Paragon spring wheat background and (iii) UK modern cultivars including cv. Paragon under low N and high N conditions. A field experiment was carried out in two seasons examining 15 genotypes (five landraces, five synthetic-derived (SD) hexaploid lines and five UK modern cultivars) under low N and high N conditions at Nottingham University farm, UK. Machine-harvested grain yield, above-ground biomass and NUE were measured. Physiological traits were assessed including flag-leaf light-saturated photosynthetic rate (Amax) and relative chlorophyll content (SPAD) under HN conditions; and flag-leaf senescence duration and rate and Normalized Difference Vegetative Index (NDVI) under LN and HN conditions. Under HN conditions, the modern cultivars overall produced higher grain yield than the SD lines (+9.7%) and the landraces (+60.4%); and the modern cultivars and SD lines also produced higher biomass than the landraces (30.3% and 28.4%, respectively). Under LN conditions, reduction in grain yield and biomass compared to HN conditions was least for the landraces (−1% and −8.6%, respectively), intermediate for the SD lines (−7.4 and −10.2%, respectively) and highest for the modern cultivars (−9.3 and −24.6%, respectively). As a result, the SD lines had higher biomass (+17%) than the modern cultivars under LN conditions. Under HN conditions the synthetic derivatives (23.8 μmol m−2 s−1) and modern cultivars (241.1 μmol m−2 s−1) had higher pre-anthesis Amax than the landraces (19.7 μmol m−2 s−1) (P < 0.001). Pre-anthesis Amax was strongly positively linearly associated with above-ground biomass (R2 = 0.63, P < 0.001) and grain yield (R2 = 0.75, P < 0.001) amongst the 15 genotypes. Flag-leaf Amax was also positively linearly associated with flag-leaf relative chlorophyll content at anthesis (R2 = 0.74; P < 0.001). Comparing the SD lines to the recurrent parent Paragon, under HN conditions one line (SD 22) had higher pre-anthesis flag-leaf Amax than Paragon (P < 0.05). Under LN conditions one line (SD 24, +27%) had higher yield than Paragon (P < 0.05) and two lines (SD 24 and SD 38, +32% and +31%, respectively) had more biomass than Paragon (P < 0.05). Our results indicated that introgressing traits from synthetic-derived wheat and landraces into UK modern wheat germplasm offers scope to raise above-ground biomass and grain yield in moderate-to-low N availability environments