Implications of ostracod preservation in Holocene paleoenvironmental reconstruction of Lake La Brava (Argentina)

Peer reviewe

Mid-late Holocene lake levels and trophic states of a shallow lake from the southern Pampa plain, Argentina

Changes in trophic status of the shallow Lake La Brava (southeastern Pampa plain of Argentina) are evaluated based on geochemical, biological and sedimentological data. Based on a conceptual framework, we propose that the lake level defines the water column mixing conditions, affecting internal lake processes and determining the transparency of lake water. The shift between alternative states is reconstructed for the last ~4800 years. Four main lake stages have been recognized, although short term shifts characterize all stages. A turbid phytoplankton-dominated state prevailed between ~4700-4500 cal yr before present (BP). Drier conditions and low lake levels pushed the lake to a clear state until 2000 cal yr BP. Afterwards the lake switched back to a turbid state, and these conditions persisted until ~200 cal yr BP. In the last 200 years, the lake switched back and forth between clear and turbid states. The latter represents the modern conditions of the lake since ~1950 AD. These shifts can be attributed mainly to climatic drivers.We thank to Dr Juan Manuel Lirio and Lic Mario Núñez (Instituto Antártico Argentino) for field support. Nora Irene Maidana (Departamento de Biodiversidad y Biología Experimental, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Argentina) help with diatom identification. Financial support was provided by PIP-CONICET 1265/08, PIP-CONICET 2142001100 100014, UBACyT 20020110100153 and CICYT project EROMED (CGL2011-25486). We thank the editor and two anonymous reviewers for their constructive comments, which helped us to improve the manuscript. This is the IDEAN contribution number R-112.Peer Reviewe

El uso de parámetros magnéticos en estudios paleolimnológicos en Antártida

En esta contribución se describen las distintas técnicas y mediciones magnéticas utilizadas en Magnetismo Ambiental y Paleomagnetismo. Tales mediciones ofrecen útiles indicadores para realizar estudios relacionados con cambios climáticos y ambientales, así como herramientas de datación. Si bien es ampliamente conocida la utilidad de la susceptibilidad magnética, en primer lugar se discute el potencial y necesidad del uso de parámetros adicionales obtenidos a partir de mediciones de magnetizaciones remanentes (natural, anhistérica e isotérmica), histéresis magnética y estudios termomagnéticos. A continuación se presentan resultados magnéticos obtenidos en sedimentos lacustres del Archipiélago James Ross (NE de la Península Antártica) como un caso de estudio. Se complementa con estudios sedimentológicos, hidroquímicos, geoquímicos y de estadística multivariada, pero se pone énfasis en los parámetros magnéticos y su relación con los distintos procesos que ocurren en los sistemas lacustres antárticos. Se analiza además el uso de las paleointensidades relativas como herramienta de datación en lagunas antárticas

Theoretical study of pattern formation during the catalytic oxidation of CO on Pt{100} at low pressures

Theoretical studies have thus far been unable to model pattern formation during the reaction in this system on physically feasible length and time scales. In this paper, we derive a computational reaction-diffusion model for this system in which most of the input parameters have been determined experimentally. We model the surface on a mesoscopic scale intermediate between the microscopic size of CO islands and the macroscopic length scale of pattern formation. In agreement with experimental investigations [M. Eiswirth et al., Z. Phys. Chem., Neue Folge 144, 59 (1985)], the results from our model divide the CO and O-2 partial pressure parameter space into three regions defined by the level of CO coverage or the presence of sustained oscillations. We see CO fronts moving into oxygen-covered regions, with the 1 x 1 to hex phase change occurring at the leading edge. There are also traveling waves consisting of successive oxygen and CO fronts that move into areas of relatively high CO coverage, and in this case, the phase change is more gradual and of lower amplitude. The propagation speed of these reaction waves is similar to those observed experimentally for CO and oxygen fronts [H. H. Rotermund , J. Chem. Phys. 91, 4942 (1989); H. H. Rotermund , Nature (London) 343, 355 (1990); J. Lauterbach and H. H. Rotermund, Surf. Sci. 311, 231 (1994)]. In the two-dimensional version of our model, the traveling waves take the form of target patterns emitted from surface inhomogeneities.</p

A systems pharmacology model for inflammatory bowel disease

Motivation The literature on complex diseases is abundant but not always quantitative. This is particularly so for Inflammatory Bowel Disease (IBD), where many molecular pathways are qualitatively well described but this information cannot be used in traditional quantitative mathematical models employed in drug development. We propose the elaboration and validation of a logic network for IBD able to capture the information available in the literature that will facilitate the identification/validation of therapeutic targets. Results In this article, we propose a logic model for Inflammatory Bowel Disease (IBD) which consists of 43 nodes and 298 qualitative interactions. The model presented is able to describe the pathogenic mechanisms of the disorder and qualitatively describes the characteristic chronic inflammation. A perturbation analysis performed on the IBD network indicates that the model is robust. Also, as described in clinical trials, a simulation of anti-TNFα, anti-IL2 and Granulocyte and Monocyte Apheresis showed a decrease in the Metalloproteinases node (MMPs), which means a decrease in tissue damage. In contrast, as clinical trials have demonstrated, a simulation of anti-IL17 and anti-IFNγ or IL10 overexpression therapy did not show any major change in MMPs expression, as corresponds to a failed therapy. The model proved to be a promising in silico tool for the evaluation of potential therapeutic targets, the identification of new IBD biomarkers, the integration of IBD polymorphisms to anticipate responders and non-responders and can be reduced and transformed in quantitative model/s

Role of a Transbilayer pH Gradient in the Membrane Fusion Activity of the Influenza Virus Hemagglutinin: Use of the R18 Assay to Monitor Membrane Merging

It had been suggested that influenza virus-mediated membrane fusion might be dependent on a pH gradient across a target membrane. We have designed experiments in which this issue could be addressed. Two populations of liposomes were prepared, both simulating the plasma membrane of target cells, but with the pH of the internal aqueous medium buffered either at pH 7.4 (physiological cytosol pH) or at pH 5.0 (endosomal pH at which influenza virus displays maximal fusion activity). By monitoring fusion using the R18 assay, we found that the internal pH of the target liposomes did not influence membrane merging as mediated by the influenza virus hemagglutinin, thus demonstrating that a transmembrane pH gradient is not required in this fusion process

El uso de parámetros magnéticos en estudios paleolimnológicos en Antártida

En esta contribución se describen las distintas técnicas y mediciones magnéticasutilizadas en Magnetismo Ambiental y Paleomagnetismo. Tales mediciones ofrecen útilesindicadores para realizar estudios relacionados con cambios climáticos y ambientales,así como herramientas de datación. Si bien es ampliamente conocida la utilidad de lasusceptibilidad magnética, en primer lugar se discute el potencial y necesidad del uso deparámetros adicionales obtenidos a partir de mediciones de magnetizaciones remanentes(natural, anhistérica e isotérmica), histéresis magnética y estudios termomagnéticos. Acontinuación se presentan resultados magnéticos obtenidos en sedimentos lacustresdel Archipiélago James Ross (NE de la Península Antártica) como un caso de estudio.Se complementa con estudios sedimentológicos, hidroquímicos, geoquímicos y deestadística multivariada, pero se pone énfasis en los parámetros magnéticos y su relacióncon los distintos procesos que ocurren en los sistemas lacustres antárticos. Se analizaademás el uso de las paleointensidades relativas como herramienta de datación enlagunas antárticas

Mouse Hepatitis Coronavirus RNA Replication Depends on GBF1-Mediated ARF1 Activation

Coronaviruses induce in infected cells the formation of double membrane vesicles, which are the sites of RNA replication. Not much is known about the formation of these vesicles, although recent observations indicate an important role for the endoplasmic reticulum in the formation of the mouse hepatitis coronavirus (MHV) replication complexes (RCs). We now show that MHV replication is sensitive to brefeldin A (BFA). Consistently, expression of a dominant-negative mutant of ARF1, known to mimic the action of the drug, inhibited MHV infection profoundly. Immunofluorescence analysis and quantitative electron microscopy demonstrated that BFA did not block the formation of RCs per se, but rather reduced their number. MHV RNA replication was not sensitive to BFA in MDCK cells, which are known to express the BFA-resistant guanine nucleotide exchange factor GBF1. Accordingly, individual knockdown of the Golgi-resident targets of BFA by transfection of small interfering RNAs (siRNAs) showed that GBF1, but not BIG1 or BIG2, was critically involved in MHV RNA replication. ARF1, the cellular effector of GBF1, also appeared to be involved in MHV replication, as siRNAs targeting this small GTPase inhibited MHV infection significantly. Collectively, our results demonstrate that GBF1-mediated ARF1 activation is required for efficient MHV RNA replication and reveal that the early secretory pathway and MHV replication complex formation are closely connected

Release of Intracellular Calcium Stores Facilitates Coxsackievirus Entry into Polarized Endothelial Cells

Group B coxsackieviruses (CVB) are associated with viral-induced heart disease and are among the leading causes of aseptic meningitis worldwide. Here we show that CVB entry into polarized brain microvasculature and aortic endothelial cells triggers a depletion of intracellular calcium stores initiated through viral attachment to the apical attachment factor decay-accelerating factor. Calcium release was dependent upon a signaling cascade that required the activity of the Src family of tyrosine kinases, phospholipase C, and the inositol 1,4,5-trisphosphate receptor isoform 3. CVB-mediated calcium release was required for the activation of calpain-2, a calcium-dependent cysteine protease, which controlled the vesicular trafficking of internalized CVB particles. These data point to a specific role for calcium signaling in CVB entry into polarized endothelial monolayers and highlight the unique signaling mechanisms used by these viruses to cross endothelial barriers