The effect of wind and currents on gas exchange in an estuarine system

The objectives were to develop a non-volatile tracer to use in gas exchange experiments in laterally unconfined systems and to study applications of deliberate tracers in limnology and oceanography. Progress was made on both fronts but work on the development of the non-volatile tracer proved to be more difficult and labor intensive that anticipated so no field experiments using non-volatile tracers was performed as yet. In the search for a suitable non-volatile tracer for an ocean scale gas exchange experiment a tracer was discovered which does not have the required sensitivity for a large scale experiment, but is very easy to analyze and will be well suited for smaller experiments such as gas exchange determinations on rivers and streams. Sulfur hexafluoride, SF6, was used successfully as a volatile tracer along with tritium as a non-volatile tracer to study gas exchange rates from a primary stream. This is the first gas exchange experiment in which gas exchange rates were determined on a head water stream where significant groundwater input occurs along the reach. In conjunction with SF6, Radon-222 measurements were performed on the groundwater and in the stream. The feasibility of using a combination of SF6 and radon is being studied to determine groundwater inputs and gas exchange of rates in streams with significant groundwater input without using a non-volatile tracer

Diapycnal mixing in the Antarctic Circumpolar Current

Author Posting. © American Meteorological Society, 2011. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 41 (2011): 241-246, doi:10.1175/2010JPO4557.1.The vertical dispersion of a tracer released on a density surface near 1500-m depth in the Antarctic Circumpolar Current west of Drake Passage indicates that the diapycnal diffusivity, averaged over 1 yr and over tens of thousands of square kilometers, is (1.3 ± 0.2) × 10−5 m2 s−1. Diapycnal diffusivity estimated from turbulent kinetic energy dissipation measurements about the area occupied by the tracer in austral summer 2010 was somewhat less, but still within a factor of 2, at (0.75 ± 0.07) × 10−5 m2 s−1. Turbulent diapycnal mixing of this intensity is characteristic of the midlatitude ocean interior, where the energy for mixing is believed to derive from internal wave breaking. Indeed, despite the frequent and intense atmospheric forcing experienced by the Southern Ocean, the amplitude of finescale velocity shear sampled about the tracer was similar to background amplitudes in the midlatitude ocean, with levels elevated to only 20%–50% above the Garrett–Munk reference spectrum. These results add to a long line of evidence that diapycnal mixing in the interior middepth ocean is weak and is likely too small to dictate the middepth meridional overturning circulation of the ocean.This material is based upon work supported by the National Science Foundation Grants OCE-0622825,OCE-0622670, OCE-0622630, and OCE-0623177

Brazil Basin Tracer Release Experiment

The purpose of the Brazil Basin Tracer Release Experiment is to measure diapycnal (across isopycnal) mixing and epipycnal (along-isopycnal) mixing and stirring in the deep ocean. This cruise is the fourth in the overall experiment. In the first cruise in early 1996, 110 kg of sulfur hexafluoride (SF6) were released on an isopycnal surface near 4000 meters depth in the eastern part of the basin on the flanks of the Mid-Atlantic Ridge (MAR). The location of the release was near 21.7 S, 18.4 W. The release site was over a zonal valley that leads to the MAR and is about 5000 m deep. The isopycnal surface of the release was defined as the surface on which the potential density anomaly, referenced to 4000 dbar pressure, was 45.9408 kg/m3. The release streaks and results of initial sampling in 1996 are described in Polzin et al. [1997]

The prediction, verification, and significance of flank jets at mid-ocean ridges

Author Posting. © The Oceanography Society, 2012. This article is posted here by permission of The Oceanography Society for personal use, not for redistribution. The definitive version was published in Oceanography 25, no. 1 (2012): 277–283, doi:10.5670/oceanog.2012.26.One aspect of ocean flow over mid-ocean ridges that has escaped much attention is the capacity of a ridge to convert oscillatory flows into unidirectional flows. Those unidirectional flows take the form of relatively narrow jets hugging the ridge's flanks. In the Northern Hemisphere, the jets move heat and dissolved and particulate matter poleward on the west and equatorward on the east of north-south trending ridges. Recent measurements and a model of flow at the East Pacific Rise at 9–10°N show that these ridge-parallel flows can extend 10–15 km horizontally away from the ridge axis, reach from the seafloor to several hundreds of meters above ridge crest depth, and have maximum speeds in their cores up to 10 cm s–1. Because of their along-ridge orientation and speed, the jets can significantly affect the transport of hydrothermal vent-associated larvae between vent oases along the ridge crest and, possibly, contribute to the mesoscale stirring of the abyssal ocean. Because jet-formation mechanisms involve oscillatory currents, ocean stratification, and topography, the jets are examples of "stratified topographic flow rectification." Ridge jets have parallels in rectified flows at seamounts and submarine banks.JWL is supported by the National Oceanic and Atmospheric Administration (NOAA) Pacific Marine Environmental Laboratory and by NOAA Vents Program. The work of other authors has been supported by National Science Foundation through grants OCE-0424953 and OCE-0425361, LADDER (LArval Dispersion along the Deep East pacific Rise)

Dispersion of a tracer in the deep Gulf of Mexico

Author Posting. © American Geophysical Union, 2016. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 121 (2016): 1110–1132, doi:10.1002/2015JC011405.A 25 km streak of CF3SF5 was released on an isopycnal surface approximately 1100 m deep, and 150 m above the bottom, along the continental slope of the northern Gulf of Mexico, to study stirring and mixing of a passive tracer. The location and depth of the release were near those of the deep hydrocarbon plume resulting from the 2010 Deepwater Horizon oil well rupture. The tracer was sampled between 5 and 12 days after release, and again 4 and 12 months after release. The tracer moved along the slope at first but gradually moved into the interior of the Gulf. Diapycnal spreading of the patch during the first 4 months was much faster than it was between 4 and 12 months, indicating that mixing was greatly enhanced over the slope. The rate of lateral homogenization of the tracer was much greater than observed in similar experiments in the open ocean, again possibly enhanced near the slope. Maximum concentrations found in the surveys had fallen by factors of 104, 107, and 108, at 1 week, 4 months, and 12 months, respectively, compared with those estimated for the initial tracer streak. A regional ocean model was used to simulate the tracer field and help interpret its dispersion and temporal evolution. Model-data comparisons show that the model simulation was able to replicate statistics of the observed tracer distribution that would be important in assessing the impact of oil releases in the middepth Gulf.This research was made possible by a grant from The Gulf of Mexico Research Initiative.2016-08-0

Estimating a sub-mesoscale diffusivity using a roughness measure applied to a tracer release experiment in the Southern Ocean

We test the use of a measure to diagnose a sub-mesoscale isopycnal diffusivity by determining the best match between observations of a tracer and simulations with varying small-scale diffusivities. Specifically, the robustness of a ‘roughness’ measure to discriminate between tracer fields experiencing different sub-mesoscale isopycnal diffusivities and advected by scaled altimetric velocity fields is investigated. We use the measure to compare numerical simulations of the tracer released at a depth of about 1.5 km in the Pacific sector of the Southern Ocean during the Diapycnal and Isopycnal Mixing Experiment in the Southern Ocean (DIMES) field campaign with observations of the tracer taken on DIMES cruises. We find that simulations with an isopycnal diffusivity of ~20 m2s−1 best match observations in the Pacific sector of the ACC, rising to ~20-50 m2s−1 through Drake Passage, representing sub-mesoscale processes and any mesoscale processes unresolved by the advecting altimetry fields. The roughness measure is demonstrated to be a statistically robust way to estimate a small-scale diffusivity when measurements are relatively sparse in space and time, although it does not work if there are too few measurements overall. The planning of tracer measurements during a cruise in order to maximise the robustness of the roughness measure is also considered. It is found that the robustness is increased if the spatial resolution of tracer measurements is increased with the time since tracer release

Stirring by small-scale vortices caused by patchy mixing

Author Posting. © American Meteorological Society, 2005. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 35 (2005): 1245-1262, doi:10.1175/JPO2713.1.Evidence is presented that lateral dispersion on scales of 1–10 km in the stratified waters of the continental shelf may be significantly enhanced by stirring by small-scale geostrophic motions caused by patches of mixed fluid adjusting in the aftermath of diapycnal mixing events. Dye-release experiments conducted during the recent Coastal Mixing and Optics (CMO) experiment provide estimates of diapycnal and lateral dispersion. Microstructure observations made during these experiments showed patchy turbulence on vertical scales of 1–10 m and horizontal scales of a few hundred meters to a few kilometers. Momentum scaling and a simple random walk formulation were used to estimate the effective lateral dispersion caused by motions resulting from lateral adjustment following episodic mixing events. It is predicted that lateral dispersion is largest when the scale of mixed patches is on the order of the internal Rossby radius of deformation, which seems to have been the case for CMO. For parameter values relevant to CMO, lower-bound estimates of the effective lateral diffusivity by this mechanism ranged from 0.1 to 1 m2s−1. Revised estimates after accounting for the possibility of long-lived motions were an order of magnitude larger and ranged from 1 to 10 m2s−1. The predicted dispersion is large enough to explain the observed lateral dispersion in all four CMO dye-release experiments examined.The Coastal Mixing and Optics dye studies were funded by the Office of Naval Research under Grants N00014-95-1-0633 (tracer experiments) and N00014-95-1-1063 (AASERT fellowship). Additional analysis was also performed under ONR Grant N00014-01-1-0984

Three-dimensional mapping of fluorescent dye using a scanning, depth-resolving airborne lidar

Author Posting. © American Meteorological Society, 2007. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Atmospheric and Oceanic Technology 24 (2007): 1050-1065, doi:10.1175/JTECH2027.1.Results are presented from a pilot study using a fluorescent dye tracer imaged by airborne lidar in the ocean surface layer on spatial scales of meters to kilometers and temporal scales of minutes to hours. The lidar used here employs a scanning, frequency-doubled Nd:YAG laser to emit an infrared (1064 nm) and green (532 nm) pulse 6 ns in duration at a rate of 1 kHz. The received signal is split to infrared, green, and fluorescent (nominally 580–600 nm) channels, the latter two of which are used to compute absolute dye concentration as a function of depth and horizontal position. Comparison of dye concentrations inferred from the lidar with in situ fluorometry measurements made by ship shows good agreement both qualitatively and quantitatively for absolute dye concentrations ranging from 1 to >10 ppb. Uncertainties associated with horizontal variations in the natural seawater attenuation are approximately 1 ppb. The results demonstrate the ability of airborne lidar to capture high-resolution three-dimensional “snapshots” of the distribution of the tracer as it evolves over very short time and space scales. Such measurements offer a powerful observational tool for studies of transport and mixing on these scales.Support was provided by the Cecil H. and Ida M. Green Technology Innovation Fund under Grant 27001545, the Office of Naval Research Grant N00014-01-1-0984, and the Woods Hole Oceanographic Institution Coastal Ocean Institute

Active positioning of vent larvae at a mid-ocean ridge

Author Posting. © The Author(s), 2013. This is the author's version of the work. It is posted here by permission of Elsevier B.V. for personal use, not for redistribution. The definitive version was published in Deep Sea Research Part II: Topical Studies in Oceanography 92 (2013): 46-57, doi:10.1016/j.dsr2.2013.03.032.The vertical position of larvae of vent species above a mid-ocean ridge potentially has a strong effect on their dispersal. Larvae may be advected upward in the buoyant vent plume, or move as a consequence of their buoyancy or active swimming. Alternatively, they may be retained near bottom by the topography of the axial trough, or by downward swimming. At vents near 9°50’N on the axis of the East Pacific Rise, evidence for active larval positioning was detected in a comparison between field observations of larvae in the plankton in 2006 and 2007 and distributions of non-swimming larvae in a two-dimensional bio-physical model. In the field, few vent larvae were collected at the level of the neutrally buoyant plume (~75 m above bottom); their relative abundances at that height were much lower than those of simulated larvae from a near-bottom release in the model. This discrepancy was observed for many vent species, particularly gastropods, suggesting that they may actively remain near bottom by sinking or swimming downward. Near the seafloor, larval abundance decreased from the ridge axis to 1000 m off axis much more strongly in the observations than in the simulations, again pointing to behavior as a potential regulator of larval transport. We suspect that transport off axis was reduced by downward-moving behavior, which positioned larvae into locations where they were isolated from cross-ridge currents by seafloor topography, such as the walls of the axial valley – which are not resolved in the model. Cross-ridge gradients in larval abundance varied between gastropods and polychaetes, indicating that behavior may vary between taxonomic groups, and possibly between species. These results suggest that behaviorally mediated retention of vent larvae may be common, even for species that have a long planktonic larval duration and are capable of long-distance dispersal.We gratefully acknowledge the support of NSF grants OCE-0424953 and OCE-0525361, which funded the Larval Dispersal on the Deep East Pacific Rise (LADDER) project. WHOI provided additional support to LSM as an Ocean Life Fellow, to DJM as the Holger Jannasch Chair for Excellence in Oceanography, and to JRL as the Edward W. and Betty J. Scripps Senior Scientist Chair. JWL was supported by the National Oceanic and Atmospheric Administration’s (NOAA) Vents Program and by NOAA’s Pacific Marine Environmental Laboratory

Estuarine boundary layer mixing processes : insights from dye experiments

Author Posting. © American Meteorological Society, 2007. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 37 (2007): 1859-1877, doi:10.1175/jpo3088.1.A series of dye releases in the Hudson River estuary elucidated diapycnal mixing rates and temporal variability over tidal and fortnightly time scales. Dye was injected in the bottom boundary layer for each of four releases during different phases of the tide and of the spring–neap cycle. Diapycnal mixing occurs primarily through entrainment that is driven by shear production in the bottom boundary layer. On flood the dye extended vertically through the bottom mixed layer, and its concentration decreased abruptly near the base of the pycnocline, usually at a height corresponding to a velocity maximum. Boundary layer growth is consistent with a one-dimensional, stress-driven entrainment model. A model was developed for the vertical structure of the vertical eddy viscosity in the flood tide boundary layer that is proportional to u2*/N∞, where u* and N∞ are the bottom friction velocity and buoyancy frequency above the boundary layer. The model also predicts that the buoyancy flux averaged over the bottom boundary layer is equal to 0.06N∞u2* or, based on the structure of the boundary layer equal to 0.1NBLu2*, where NBL is the buoyancy frequency across the flood-tide boundary layer. Estimates of shear production and buoyancy flux indicate that the flux Richardson number in the flood-tide boundary layer is 0.1–0.18, consistent with the model indicating that the flux Richardson number is between 0.1 and 0.14. During ebb, the boundary layer was more stratified, and its vertical extent was not as sharply delineated as in the flood. During neap tide the rate of mixing during ebb was significantly weaker than on flood, owing to reduced bottom stress and stabilization by stratification. As tidal amplitude increased ebb mixing increased and more closely resembled the boundary layer entrainment process observed during the flood. Tidal straining modestly increased the entrainment rate during the flood, and it restratified the boundary layer and inhibited mixing during the ebb.The work was supported by the National Science Foundation Grant OCE00-95972 (W. Geyer, J. Lerczak), OCE00-99310 (R. Houghton), and OCE00-95913 (R. Chant, E. Hunter)