Macroalgae contribute to nested mosaics of pH variability in a subarctic fjord

The Arctic Ocean is considered the most vulnerable ecosystem to ocean acidification, and large-scale assessments of pH and the saturation state for aragonite (O_arag) have led to the notion that the Arctic Ocean is already close to a corrosive state. In high-latitude coastal waters the regulation of pH and O_arag is, however, far more complex than offshore because increased biological activity and input of glacial meltwater affect pH. Effects of ocean acidification on calcifiers and non-calcifying phototrophs occupying coastal habitats cannot be derived from extrapolation of current and forecasted offshore conditions, but they require an understanding of the regimes of pH and O_arag in their coastal habitats. To increase knowledge of the natural variability in pH in the Arctic coastal zone and specifically to test the influence of benthic vegetated habitats, we quantified pH variability in a Greenland fjord in a nested-scale approach. A sensor array logging pH, O₂, PAR, temperature and salinity was applied on spatial scales ranging from kilometre scale across the horizontal extension of the fjord; to 100 m scale vertically in the fjord, 10–100 m scale between subtidal habitats with and without kelp forests and between vegetated tidal pools and adjacent vegetated shores; and to centimetre to metre scale within kelp forests and millimetre scale across diffusive boundary layers of macrophyte tissue. In addition, we assessed the temporal variability in pH on diurnal and seasonal scales. Based on pH measurements combined with point samples of total alkalinity, dissolved inorganic carbon and relationships to salinity, we also estimated variability in O_arag. Results show variability in pH and O_arag of up to 0.2–0.3 units at several scales, i.e. along the horizontal and vertical extension of the fjord, between seasons and on a diel basis in benthic habitats and within 1 m³ of kelp forest. Vegetated intertidal pools exhibited extreme diel pH variability of > 1.5 units and macrophyte diffusive boundary layers a pH range of up to 0.8 units. Overall, pelagic and benthic metabolism was an important driver of pH and O_arag producing mosaics of variability from low levels in the dark to peak levels at high irradiance generally appearing favourable for calcification. We suggest that productive coastal environments may form niches of high pH in a future acidified Arctic Ocean

Identification of tightly regulated groups of genes during Drosophila melanogaster embryogenesis

Time-series analysis of whole-genome expression data during Drosophila melanogaster development indicates that up to 86% of its genes change their relative transcript level during embryogenesis. By applying conservative filtering criteria and requiring ‘sharp' transcript changes, we identified 1534 maternal genes, 792 transient zygotic genes, and 1053 genes whose transcript levels increase during embryogenesis. Each of these three categories is dominated by groups of genes where all transcript levels increase and/or decrease at similar times, suggesting a common mode of regulation. For example, 34% of the transiently expressed genes fall into three groups, with increased transcript levels between 2.5–12, 11–20, and 15–20 h of development, respectively. We highlight common and distinctive functional features of these expression groups and identify a coupling between downregulation of transcript levels and targeted protein degradation. By mapping the groups to the protein network, we also predict and experimentally confirm new functional associations

Knee complaints and consequences on work status; a 10-year follow-up survey among floor layers and graphic designers

<p>Abstract</p> <p>Background</p> <p>The purpose of the study was to examine if knee complaints among floor layers predict exclusion from the trade.</p> <p>Methods</p> <p>In 1994/95 self-reported data were obtained from a cohort of floor layers and graphic designers with and without knee straining work activities, respectively. At follow-up in 2005 the questionnaire survey was repeated. The study population consisted of 81 floor layers and 173 graphic designers who were presently working in their trades at baseline (1995). All participants were men aged 36–70 years in 2005.</p> <p>We computed the risk of losing gainful employment in the trade according to occurrence of knee complaints at baseline, using Cox proportional hazard regression adjusted for a number of potential confounding variables. Moreover, the crude and adjusted odds risk ratio for knee complaints according to status of employment in the trade were computed, using graphic designers as reference.</p> <p>Results</p> <p>A positive but non-significant association between knee complaints lasting more than 30 days the past 12 months and exclusion from the trade was found among floor layers (Hazard Ratio = 1.4, 95% CI = 0.6–3.5).</p> <p>The frequency of self-reported knee complaints was lower among floor layers presently at work in the trade in year 2005 (26.3%) compared with baseline in 1995 (41.1%), while the opposite tendency was seen among graphic designers (20.7% vs. 10.7%).</p> <p>Conclusion</p> <p>The study suggests that knee complaints are a risk factor for premature exclusion from a knee demanding trade. However, low power of the study precludes strong conclusions. The study also indicates a healthy worker effect among floor layers and a survivor effect among graphic designers.</p

Seagrass meadows as a globally significant carbonate reservoir

There has been growing interest in quantifying the capacity of seagrass ecosystems to act as carbon sinks as a natural way of offsetting anthropogenic carbon emissions to the atmosphere. However, most of the efforts have focused on the particulate organic carbon (POC) stocks and accumulation rates and ignored the particulate inorganic carbon (PIC) fraction, despite important carbonate pools associated with calcifying organisms inhabiting the meadows, such as epiphytes and benthic invertebrates, and despite the relevance that carbonate precipitation and dissolution processes have in the global carbon cycle. This study offers the first assessment of the global PIC stocks in seagrass sediments using a synthesis of published and unpublished data on sediment carbonate concentration from 403 vegetated and 34 adjacent un-vegetated sites. PIC stocks in the top 1 m of sediment ranged between 3 and 1660 Mg PIC ha(-1), with an average of 654 +/- 24 Mg PIC ha(-1), exceeding those of POC reported in previous studies by about a factor of 5. Sedimentary carbonate stocks varied across seagrass communities, with meadows dominated by Halodule, Thalassia or Cymodocea supporting the highest PIC stocks, and tended to decrease polewards at a rate of -8 +/- 2 Mg PIC ha(-1) per degree of latitude (general linear model, GLM; p \u3c 0.0003). Using PIC concentrations and estimates of sediment accretion in seagrass meadows, the mean PIC accumulation rate in seagrass sediments is found to be 126.3 +/- 31.05 g PIC m(-2) yr(-1). Based on the global extent of seagrass meadows (177 000 to 600 000 km(2)), these ecosystems globally store between 11 and 39 Pg of PIC in the top metre of sediment and accumulate between 22 and 75 Tg PIC yr(-1), representing a significant contribution to the carbonate dynamics of coastal areas. Despite the fact that these high rates of carbonate accumulation imply CO2 emissions from precipitation, seagrass meadows are still strong CO2 sinks as demonstrated by the comparison of carbon (PIC and POC) stocks between vegetated and adjacent un-vegetated sediments

Climate-driven impacts of exotic species on marine ecosystems

Aim Temperature is fundamental to the physiological and ecological performance of marine organisms, but its role in modulating the magnitude of ecological impacts by exotic species remains unresolved. Here, we examine the relationship between thermal regimes in the range of origin of marine exotic species and sites of measured impact, after human-induced introduction. We compare this relationship with the magnitude of impact exerted by exotic species on native ecosystems. Location Global. Time period 1977–2017 (meta-analysis). Major taxa studied Marine exotic species. Methods Quantitative impacts of exotic species in marine ecosystems were obtained from a global database. The native range of origin of exotic species was used to estimate the realized thermal niche for each species and compared with the latitude and climatic conditions in recipient sites of recorded impact of exotic species. The difference in median temperatures between recipient sites and the thermal range of origin (i.e., thermal midpoint anomaly) was compared with the magnitude of effect sizes by exotic species on native species, communities and ecosystems. Results Recorded impacts occurred predominantly within the thermal niche of origin of exotic species, albeit with a tendency toward higher latitudes and slightly cooler conditions. The severity of impacts by exotic species on abundance of native taxa displayed a hump-shaped relationship with temperature. Peak impacts were recorded in recipient sites that were 2.2°C cooler than the thermal midpoint of the range of origin of exotic species, and impacts decreased in magnitude toward higher and lower thermal anomalies. Main conclusions Our findings highlight how temperature and climatic context influence ecological impacts by exotic species in marine ecosystems and the implications for existing and novel species interactions under climate change.En prensa5,14

An objective framework to test the quality of candidate indicators of good environmental status

This is the final version. Available from the publisher via the DOI in this record.Large efforts are on-going within the EU to prepare the Marine Strategy Framework Directive's (MSFD) assessment of the environmental status of the European seas. This assessment will only be as good as the indicators chosen to monitor the 11 descriptors of good environmental status (GEnS). An objective and transparent framework to determine whether chosen indicators actually support the aims of this policy is, however, not yet in place. Such frameworks are needed to ensure that the limited resources available to this assessment optimize the likelihood of achieving GEnS within collaborating states. Here, we developed a hypothesis-based protocol to evaluate whether candidate indicators meet quality criteria explicit to the MSFD, which the assessment community aspires to. Eight quality criteria are distilled from existing initiatives, and a testing and scoring protocol for each of them is presented. We exemplify its application in three worked examples, covering indicators for three GEnS descriptors (1, 5, and 6), various habitat components (seaweeds, seagrasses, benthic macrofauna, and plankton), and assessment regions (Danish, Lithuanian, and UK waters). We argue that this framework provides a necessary, transparent and standardized structure to support the comparison of candidate indicators, and the decision-making process leading to indicator selection. Its application could help identify potential limitations in currently available candidate metrics and, in such cases, help focus the development of more adequate indicators. Use of such standardized approaches will facilitate the sharing of knowledge gained across the MSFD parties despite context-specificity across assessment regions, and support the evidence-based management of European seas.European Union: 7th Framework ProgrammeNatural Environment Research Council (NERC)UK Department for Environment, Food and Rural Affair

Species traits and geomorphic setting as drivers of global soil carbon stocks in seagrass meadows

Our knowledge of the factors that can influence the stock of organic carbon (OC) that is stored in the soil of seagrass meadows is evolving, and several causal effects have been used to explain the variation of stocks observed at local to national scales. To gain a global-scale appreciation of the drivers that cause variation in soil OC stocks, we compiled data on published species-specific traits and OC stocks from monospecific and mixed meadows at multiple geomorphological settings. Species identity was recognized as an influential driver of soil OC stocks, despite their large intraspecific variation. The most important seagrass species traits associated with OC stocks were the number of leaves per seagrass shoot, belowground biomass, leaf lifespan, aboveground biomass, leaf lignin, leaf breaking force and leaf OC plus the coastal geomorphology of the area, particularly for lagoon environments. A revised estimate of the global average soil OC stock to 20 cm depth of 15.4 Mg C ha−1 is lower than previously reported. The largest stocks were still recorded in Mediterranean seagrass meadows. Our results specifically identify Posidonia oceanica from the Mediterranean and, more generally, large and persistent species as key in providing climate regulation services, and as priority species for conservation for this specific ecosystem service

Global seaweed productivity

The magnitude and distribution of net primary production (NPP) in the coastal ocean remains poorly constrained, particularly for shallow marine vegetation. Here, using a compilation of in situ annual NPP measurements across >400 sites in 72 geographic ecoregions, we provide global predictions of the productivity of seaweed habitats, which form the largest vegetated coastal biome on the planet. We find that seaweed NPP is strongly coupled to climatic variables, peaks at temperate latitudes, and is dominated by forests of large brown seaweeds. Seaweed forests exhibit exceptionally high per-area production rates (a global average of 656 and 1711 gC m−2 year−1 in the subtidal and intertidal, respectively), being up to 10 times higher than coastal phytoplankton in temperate and polar seas. Our results show that seaweed NPP is a strong driver of production in the coastal ocean and call for its integration in the oceanic carbon cycle, where it has traditionally been overlooked