593 research outputs found
Pseudopotentials for H to Kr optimized for gradient-corrected exchange-correlation functionals
Pseudopotential parameter sets for the elements from H to Kr using the relativistic, norm-conserving, separable, dual-space Gaussian-type pseudopotentials of Goedecker, Teter, and Hutter (GTH) are presented as optimized for the gradient-corrected exchange-correlation functionals of Becke, Lee, Yang, and Parr (BLYP), Becke and Perdew (BP), and Perdew, Burke, and Ernzerhof (PBE). The accuracy and reliability of the GTH pseudopotentials is shown by calculations for a series of small molecule
Ab initio molecular dynamics simulations of negative thermal expansion in ScF3: The effect of the supercell size
The authors sincerely thank S. Ali, A. Kalinko, and F. Rocca for providing experimental EXAFS data, as well as M. Isupova, V. Kashcheyevs, and A. I. Popov for stimulating discussions. Financial support provided by project No. 1.1.1.2/VIAA/l/16/147 (1.1.1.2/16/I/001) under the activity “Post-doctoral research aid” realized at the Institute of Solid State Physics, University of Latvia is greatly acknowledged by D.B. A.K and J.P. would like to thank the support of the Latvian Council of Science project No. lzp-2018/2–0353.Scandium fluoride (ScF3) belongs to a class of negative thermal expansion (NTE) materials. It shows a strong lattice contraction up to about 1000 K switching to expansion at higher temperatures. Here the NTE effect in ScF3 is studied in the temperature range from 300 K to 1600 K using ab initio molecular dynamics (AIMD) simulations in the isothermal-isobaric (NpT) ensemble. The temperature dependence of the lattice constant, inter-atomic Sc–F–Sc bond angle distributions and the Sc–F and Sc–Sc radial distribution functions is obtained as a function of supercell size from 2a × 2a × 2a to 5a × 5a × 5a where a is the lattice parameter of ScF3. A comparison with the experimental Sc K-edge EXAFS data at 600 K is used to validate the accuracy of the AIMD simulations. Our results suggest that the AIMD calculations are able to reproduce qualitatively the NTE effect in ScF3, however a supercell size larger than 2a × 2a × 2a should be used to account accurately for dynamic disorder. The origin of the NTE in ScF3 is explained by the interplay between expansion and rotation of ScF6 octahedraLatvian Council of Science lzp-2018/2–0353; Institute of Solid State Physics, University of Latvia 1.1.1.2/VIAA/l/16/147 (1.1.1.2/16/I/001); Chinese Academy of Sciences; Institute of Solid State Physics, University of Latvia as the Center of Excellence has received funding from the European Union’s Horizon 2020 Framework Programme H2020-WIDESPREAD-01-2016-2017-TeamingPhase2 under grant agreement No. 739508, project CAMART²https://www.sciencedirect.com/science/article/pii/S092702561930497
Convergence Acceleration of the Harmonic Balance Method using a Time-Level Preconditioner
The Harmonic Balance method is nowadays widely applied for numerically solving problems that are known to possess time-periodic solutions. Key reasons for its success are its wide range of applicability, relative ease of implementation, and computational efficiency compared to time-accurate approaches. The computational efficiency of the Harmonic Balance method is partly derived from the fact that it searches directly for a periodic solution, instead of integrating the governing equations in time until a periodic solution is reached. Convergence acceleration techniques such as multigrid, implicit residual smoothing and local time stepping may also be used to improve the efficiency of the Harmonic Balance method. This paper considers another option for accelerating convergence, namely a novel time-level preconditioner that can be applied to the Harmonic Balance residual locally in each computational cell. This preconditioner is derived from a rigorous stability analysis of the Harmonic Balance equations and is shown to give a speed-up factor of 2 when applied to simulations of laminar vortex shedding behind a circular cylinder
Comparison between control-based continuation and phase-locked loop methods for the identification of backbone curves and nonlinear frequency responses
Control-based continuation (CBC) and phase-locked loops (PLL) are two experimental testing methods that have demonstrated great potential for the non-parametric identification of key nonlinear dynamic features such as nonlinear frequency responses and backbone curves. Both CBC and PLL exploit stabilizing feedback control to steer the dynamics of the tested system towards the responses of interest and overcome important difficulties experienced when applying conventional testing methods such as sine sweeps to nonlinear systems. For instance, if properly designed, the feedback controller can prevent the system from exhibiting untimely transitions between coexisting responses or even losing stability due to bifurcations. This contribution aims to highlight the similarities that exist between CBC and PLL and present the first thorough comparison of their capabilities. Comparisons are supported by numerical simulations as well as experimental data collected on a conceptually simple nonlinear structure primarily composed of a thin curved beam. The beam is doubly clamped and exhibits nonlinear geometric effects for moderate excitation amplitudes
Comparison between control-based continuation and phase-locked loop methods for the identification of backbone curves and nonlinear frequency responses
Control-based continuation (CBC) and phase-locked loops (PLL) are two experimental testing methods that have demonstrated great potential for the non-parametric identification of key nonlinear dynamic features such as nonlinear frequency responses and backbone curves. Both CBC and PLL exploit stabilizing feedback control to steer the dynamics of the tested system towards the responses of interest and overcome important difficulties experienced when applying conventional testing methods such as sine sweeps to nonlinear systems. For instance, if properly designed, the feedback controller can prevent the system from exhibiting untimely transitions between coexisting responses or even losing stability due to bifurcations. This contribution aims to highlight the similarities that exist between CBC and PLL and present the first thorough comparison of their capabilities. Comparisons are supported by numerical simulations as well as experimental data collected on a conceptually simple nonlinear structure primarily composed of a thin curved beam. The beam is doubly clamped and exhibits nonlinear geometric effects for moderate excitation amplitudes
Interplay of Strain Relaxation and Chemically Induced Diffusion Barriers: Nanostructure Formation in 2D Alloys
We study the formation of nanostructures with alternating stripes composed of
bulk-immiscible adsorbates during submonolayer heteroepitaxy. We evaluate the
influence of two mechanisms considered in the literature: (i) strain relaxation
by alternating arrangement of the adsorbate species, and (ii) kinetic
segregation due to chemically induced diffusion barriers. A model ternary
system of two adsorbates with opposite misfit relative to the substrate, and
symmetric binding is investigated by off-lattice as well as lattice kinetic
Monte Carlo simulations. We find that neither of the mechanisms (i) or (ii)
alone can account for known experimental observations. Rather, a combination of
both is needed. We present an off-lattice model which allows for a qualitative
reproduction of stripe patterns as well as island ramification in agreement
with recent experimental observations for CoAg/Ru(0001) [R. Q. Hwang, Phys.
Rev. Lett. 76, 4757 (1996)]. The quantitative dependencies of stripe width and
degree of island ramification on the misfit and interaction strength between
the two adsorbate types are presented. Attempts to capture essential features
in a simplified lattice gas model show that a detailed incorporation of
non-local effects is required.Comment: 24 pages, 12 figure
Late adult-onset Niemann Pick type C (NPC): An "atypical" typical presentation at the age of 62.
A case series and systematic review of rapid eye movement sleep behavior disorder outcome after deep brain stimulation in Parkinson’s disease
A novel penalty-based reduced order modelling method for dynamic analysis of joint structures
This work proposes a new reduced order modelling method to improve the computational efficiency for the dynamic simulation of a jointed structures with localized contact friction non-linearities. We reformulate the traditional equation of motion for a joint structure by linearising the non-linear system on the contact interface and augmenting the linearised system by introducing an internal non-linear penalty variable. The internal variable is used to compensate the possible non-linear effects from the contact interface. Three types of reduced basis are selected for the Galerkin projection, namely, the vibration modes (VMs) of the linearised system, static modes (SMs) and also the trial vector derivatives (TVDs) vectors. Using these reduced basis, it would allow the size of the internal variable to change correspondingly with the number of active non-linear DOFs. The size of the new reduced order model therefore can be automatically updated depending on the contact condition during the simulations. This would reduce significantly the model size when most of the contact nodes are in a stuck condition, which is actually often the case when a jointed structure vibrates. A case study using a 2D joint beam model is carried out to demonstrate the concept of the proposed method. The initial results from this case study is then compared to the state of the art reduced order modeling
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