Duckweed (Lemnaceae): Its Molecular Taxonomy

Duckweeds include the world's smallest and fastest growing flowering plants that have the capacity to produce huge biomass with a broad range of potential applications like production of feed and food, biofuel and biogas. In order to achieve optimal and sustainable commercial system, it is necessary that suitable species and clones of duckweeds be identified and selected based on appropriate strategies. However, a high degree of reduction in their structural complexity poses serious problems in identification of closely related species of duckweeds, on a morphological basis. Use of molecular taxonomic tools is the present solution. The state of the art of molecular taxonomy of all the five genera of duckweeds (Spirodela, Landoltia, Lemna, Wolffiella, and Wolffia) is based mainly on the techniques of fingerprinting by amplified fragment length polymorphism (AFLP) and barcoding using sequences of plastidic DNA fragments. After more than 15 years of molecular taxonomic investigations, a certain viewpoint is now available demonstrating all five genera to be monophyletic. Also, the phenetic analyses had made huge progress in delineating the currently defined 36 species of duckweeds, although, all species cannot yet be defined with confidence. Wolffiella has turned out to be the most complicated genus as only 6 to 7 species out of the 10 can be reliably delineated. Further progress in the phylogenetic and phenetic analyses requires more advanced methods like next generation and/or whole genome sequencing. First results using the method genotyping-by-sequencing in the genus Lemna (in combination with metabolomic profiling by matrix-assisted laser desorption ionization time-of-flight mass-spectrometry (MALDI-TOF-MS) as well as AFLP and barcoding by plastidic sequences) are more promising: The species Lemna valdiviana and Lemna yungensis were united to one species, Lemna valdiviana. This reduced the total number of Lemnaceae species to 36

Lemnaceae and Orontiaceae Are Phylogenetically and Morphologically Distinct from Araceae

Duckweeds comprise a distinctive clade of pleustophytic monocots that traditionally has been classified as the family Lemnaceae. However, molecular evidence has called into question their phylogenetic independence, with some authors asserting instead that duckweeds should be reclassified as subfamily Lemnoideae of an expanded family Araceae. Although a close phylogenetic relationship of duckweeds with traditional Araceae has been supported by multiple studies, the taxonomic disposition of duckweeds must be evaluated more critically to promote nomenclatural stability and utility. Subsuming duckweeds as a morphologically incongruent lineage of Araceae effectively eliminates the family category of Lemnaceae that has been widely used for many years. Instead, we suggest that Araceae subfamily Orontioideae should be restored to family status as Orontiaceae, which thereby would enable the recognition of three morphologically and phylogenetically distinct lineages: Araceae, Lemnaceae, and Orontiaceae

Differential localization of flavonoid glucosides in an aquatic plant implicates different functions under abiotic stress

Abstract Flavonoids may mediate UV protection in plants either by screening of harmful radiation or by minimizing the resulting oxidative stress. To help distinguish between these alternatives, more precise knowledge of flavonoid distribution is needed. We used confocal laser scanning microscopy (cLSM) with the “emission fingerprinting” feature to study the cellular and subcellular distribution of flavonoid glucosides in the giant duckweed ( Spirodela polyrhiza ), and investigated the fitness effects of these compounds under natural UV radiation and copper sulphate addition (oxidative stress) using common garden experiments indoors and outdoors. cLSM “emission fingerprinting” allowed us to individually visualize the major dihydroxylated B‐ring‐substituted flavonoids, luteolin 7‐O‐glucoside and luteolin 8‐C‐glucoside, in cross‐sections of the photosynthetic organs. While luteolin 8‐C‐glucoside accumulated mostly in the vacuoles and chloroplasts of mesophyll cells, luteolin 7‐O‐glucoside was predominantly found in the vacuoles of epidermal cells. In congruence with its cellular distribution, the mesophyll‐associated luteolin 8‐C‐glucoside increased plant fitness under copper sulphate addition but not under natural UV light treatment, whereas the epidermis‐associated luteolin 7‐O‐glucoside tended to increase fitness under both stresses across chemically diverse genotypes. Taken together, we demonstrate that individual flavonoid glucosides have distinct cellular and subcellular locations and promote duckweed fitness under different abiotic stresses

Nutritional Value of the Duckweed Species of the Genus Wolffia (Lemnaceae) as Human Food

Species of the genus Wolffia are traditionally used as human food in some of the Asian countries. Therefore, all 11 species of this genus, identified by molecular barcoding, were investigated for ingredients relevant to human nutrition. The total protein content varied between 20 and 30% of the freeze-dry weight, the starch content between 10 and 20%, the fat content between 1 and 5%, and the fiber content was ~25%. The essential amino acid content was higher or close to the requirements of preschool-aged children according to standards of the World Health Organization. The fat content was low, but the fraction of polyunsaturated fatty acids was above 60% of total fat and the content of n-3 polyunsaturated fatty acids was higher than that of n-6 polyunsaturated fatty acids in most species. The content of macro- and microelements (minerals) not only depended on the cultivation conditions but also on the genetic background of the species. This holds true also for the content of tocopherols, several carotenoids and phytosterols in different species and even intraspecific, clonal differences were detected in Wolffia globosa and Wolffia arrhiza. Thus, the selection of suitable clones for further applications is important. Due to the very fast growth and the highest yield in most of the nutrients, Wolffia microscopica has a high potential for practical applications in human nutrition

Genome and time-of-day transcriptome of Wolffia australiana link morphological minimization with gene loss and less growth control.

Rootless plants in the genus Wolffia are some of the fastest growing known plants on Earth. Wolffia have a reduced body plan, primarily multiplying through a budding type of asexual reproduction. Here, we generated draft reference genomes for Wolffia australiana (Benth.) Hartog & Plas, which has the smallest genome size in the genus at 357 Mb and has a reduced set of predicted protein-coding genes at about 15,000. Comparison between multiple high-quality draft genome sequences from W. australiana clones confirmed loss of several hundred genes that are highly conserved among flowering plants, including genes involved in root developmental and light signaling pathways. Wolffia has also lost most of the conserved nucleotide-binding leucine-rich repeat (NLR) genes that are known to be involved in innate immunity, as well as those involved in terpene biosynthesis, while having a significant overrepresentation of genes in the sphingolipid pathways that may signify an alternative defense system. Diurnal expression analysis revealed that only 13% of Wolffia genes are expressed in a time-of-day (TOD) fashion, which is less than the typical ∼40% found in several model plants under the same condition. In contrast to the model plants Arabidopsis and rice, many of the pathways associated with multicellular and developmental processes are not under TOD control in W. australiana, where genes that cycle the conditions tested predominantly have carbon processing and chloroplast-related functions. The Wolffia genome and TOD expression data set thus provide insight into the interplay between a streamlined plant body plan and optimized growth

2.1 Introduction 2.2 The Definition of Heavy Metals in Plant Science 2.2.1 Metals Definition of "Heavy Metals" and Their Role in Biological Systems

At first glance, it would appear to be a rather simple matter to define a "heavy metal" -it is a metal that is "heavy". Unfortunately, a more in-depth consideration reveals a huge amount of problems with this simple definition. This definition is meant to suggest that the density of a heavy metal is high, but this physical property is quite meaningless in the context of plants and other living organisms. Plants do not deal with metals in their elemental (valence state of 0) forms; they are not accessible to plants. Metals are only available to them in solution, and it is necessary for metals to react with other elements and form compounds before they can be solubilised. Once such a chemical compound is formed (e.g. a salt), the density of the metal does not play any role. We do not know of any correlation between the density of a metal and its physiological or toxicological effects, or even the chemical properties of its compounds. Therefore, let us leave the question of how to define a "heavy metal" until later, and first consider the definition of a "metal". The Definition of Heavy Metals in Plant Science Metals Metals are often characterised and distinguished from nonmetals by their physical properties -the ability to conduct heat, and an electrical resistance that is directly proportional to temperature, malleability, ductility and even lustr

Light Induces Phosphorylation of Glucan Water Dikinase, Which Precedes Starch Degradation in Turions of the Duckweed Spirodela polyrhiza

Degradation of storage starch in turions, survival organs of Spirodela polyrhiza, is induced by light. Starch granules isolated from irradiated (24 h red light) or dark-stored turions were used as an in vitro test system to study initial events of starch degradation. The starch-associated pool of glucan water dikinase (GWD) was investigated by two-dimensional gel electrophoresis and by western blotting using antibodies raised against GWD. Application of this technique allowed us to detect spots of GWD, which are light induced and absent on immunoblots prepared from dark-adapted plants. These spots, showing increased signal intensity following incubation of the starch granules with ATP, became labeled by randomized [βγ-(33)P]ATP but not by [γ-(33)P]ATP and were removed by acid phosphatase treatment. This strongly suggests that they represent a phosphorylated form(s) of GWD. The same light signal that induces starch degradation was thus demonstrated for the first time to induce autophosphorylation of starch-associated GWD. The in vitro assay system has been used to study further effects of the light signal that induces autophosphorylation of GWD and starch degradation. In comparison with starch granules from dark-adapted plants, those from irradiated plants showed increase in (1) binding capacity of GWD by ATP treatment decreased after phosphatase treatment; (2) incorporation of the β-phosphate group of ATP into starch granules; and (3) rate of degradation of isolated granules by starch-associated proteins, further enhanced by phosphorylation of starch. The presented results provide evidence that autophosphorylation of GWD precedes the initiation of starch degradation under physiological conditions