182 research outputs found
Analysing an Imbalanced Stroke Prediction Dataset Using Machine Learning Techniques
A stroke is a medical condition characterized by the rupture of blood vessels within the brain which can lead to brain damage. Various symptoms may be exhibited when the brain's supply of blood and essential nutrients is disrupted. To forecast the possibility of brain stroke occurring at an early stage using Machine Learning (ML) and Deep Learning (DL) is the main objective of this study. Timely detection of the various warning signs of a stroke can significantly reduce its severity. This paper performed a comprehensive analysis of features to enhance stroke prediction effectiveness. A reliable dataset for stroke prediction is taken from the Kaggle website to gauge the effectiveness of the proposed algorithm. The dataset has a class imbalance problem which means the total number of negative samples is higher than the total number of positive samples. The results are reported based on a balanced dataset created using oversampling techniques. The proposed work used Smote and Adasyn to handle imbalanced problem for better evaluation metrics. Additionally, the hybrid Neural Network and Random Forest (NN-RF) utilizing the balanced dataset by Adasyn oversampling achieves the highest F1-score of 75% compared to the original unbalanced dataset and other benchmarking algorithms. The proposed algorithm with balanced data utilizing hybrid NN-RF achieves an accuracy of 84%. Advanced ML techniques coupled with thorough data analysis enhance stroke prediction. This study underscores the significance of data-driven methodologies, resulting in improved accuracy and comprehension of stroke risk factors. Applying these methodologies to medical fields can enhance patient care and public health outcomes. By integrating our discoveries, we can enhance the efficiency and effectiveness of the public health system
Effect of zero tillage and different weeding methods on grain yield of durum wheat in semi-arid regions
Received: September 28th, 2020 ; Accepted: December 1st, 2020 ; Published: December 10th, 2020 ; Correspondence: [email protected] high grain yield of wheat is limited by the dominance of weeds, particularly wild
oat. Therefore, to improve wheat yield under these conditions, a field experiment was carried out
in Maru Agricultural Research Station, Jordan during 2015–2016 and 2016–2017 to investigate
yield response of two wheat varieties (Triticum durum L.) to different tillage and weeding
treatments. The experimental design used was a split-split arrangement in a randomized complete
block design with three replicates. Two-tillage treatments (conventional vs. zero tillage) were
applied to the main plot, two wheat varieties to sub-plot, and five weeding methods (hand
weeding, broadleaf + narrow leaf herbicide, broadleaf herbicide, narrow leaf herbicide, and
controls) as a sub-sub-plot. The variety ‘Umqais’ had higher plant height, biological, grain, and
straw yield than the variety ‘Sham’. Hand weeding slightly increased grain yield compared with
mixed herbicides (the 2,4-D plus Antelope Clodinatop- propagyl). Furthermore, mixed herbicides
presented a higher grain yield than using either single herbicide. The interaction between tillage
systems and weeding methods was significant in both years. The highest (P < 0.05) straw yield
(5,990 kg ha-1
) was obtained by hand weeding under conventional tillage in the first season while
the highest grain yield (2,005 kg ha-1
) was obtained by hand weeding under zero tillage in the
second season. Under all weed control treatments, the variety ‘Umqais’ had higher biological,
grain, and straw yields than the variety ‘Sham’ in the second season indicating that variety
‘Umqais’ performed better under dry conditions. Our results confirmed the superior of zero tillage
for increasing the grain yield of the variety ‘Umqais’, and for increasing the biological and straw
yields of the variety ‘Sham’ under semi-arid rainfed conditions of Jordan
Federated learning with hybrid differential privacy for secure and reliable cross-IoT platform knowledge sharing
The federated learning has gained prominent attention as a collaborative machine learning method, allowing multiple users to jointly train a shared model without directly exchanging raw data. This research addresses the fundamental challenge of balancing data privacy and utility in distributed learning by introducing an innovative hybrid methodology fusing differential privacy with federated learning(HDP-FL) Through meticulous experimentation on EMNIST and CIFAR-10 datasets, this hybrid approach yields substantial advancements, showcasing a noteworthy 4.22% and up to 9.39% enhancement in model accuracy for EMNIST and CIFAR-10, respectively, compared to conventional federated learning methods. Our adjustments to parameters highlighted how noise impacts privacy, showcasing the effectiveness of our hybrid DP approach in striking a balance between privacy and accuracy. Assessments across diverse FL techniques and client counts emphasized this trade-off, particularly in non-IID data settings, where our hybrid method effectively countered accuracy declines. Comparative analyses against standard machine learning and state-of-the-art FL approaches consistently showcased the superiority of our proposed model, achieving impressive accuracies of 96.29% for EMNIST and 82.88% for CIFAR-10. These insights offer a strategic approach to securely collaborate and share knowledge among IoT devices without compromising data privacy, ensuring efficient and reliable learning mechanisms across decentralized networks
Impostor phenomenon among urologists in Saudi Arabia
Impostor phenomenon (IP) is the persistent inability to believe that one’s
success is deserved or has been legitimately achieved due to one’s efforts or
skills. It is associated with burnout, anxiety and depression and can negatively
impact the lives of the affected individuals. This study aimed to determine the
prevalence of IP among urologists in Saudi Arabia. A cross-sectional study was
conducted among practicing urologists and urologists-in-training in Saudi Arabia
between November and December 2022. A self-administered questionnaire comprising
questions on the sociodemographic characteristics and the Clance
impostor phenomenon scale (CIPS) was distributed through email to all registered
urologists in the Saudi Commission for Health Specialties database. A total of
155 urologists (143 men and 12 women) were enrolled in this study. The majority
of the urologists (44.5%) were consultants, and the prevalence of the impostor
phenomenon in this study was 27.7%. Nearly half of the urologists (49.7%)
presented moderate levels of the phenomenon, 23.9% of the urologists
demonstrated high levels, and 20.6% presented low levels. Only 5.8% of the
urologists showed intense levels of the phenomenon. The phenomenon was
significantly more prevalent among those in training (p = 0.010) and
less prevalent among those with a subspecialty in endourology (p =
0.016). The prevalence of the impostor phenomenon among urologists was 27.7%. It
was more commonly seen in resident urologists, and those with a subspecialty in
endourology were less likely to be affected by this phenomenon
Fortunella margarita Transcriptional Reprogramming Triggered by Xanthomonas citri subsp. citri
<p>Abstract</p> <p>Background</p> <p>Citrus canker disease caused by the bacterial pathogen <it>Xanthomonas citri </it>subsp. <it>citri (</it>Xcc) <it>has </it>become endemic in areas where high temperature, rain, humidity, and windy conditions provide a favourable environment for the dissemination of the bacterium. Xcc is pathogenic on many commercial citrus varieties but appears to elicit an incompatible reaction on the citrus relative <it>Fortunella margarita </it>Swing (kumquat), in the form of a very distinct delayed necrotic response. We have developed subtractive libraries enriched in sequences expressed in kumquat leaves during both early and late stages of the disease. The isolated differentially expressed transcripts were subsequently sequenced. Our results demonstrate how the use of microarray expression profiling can help assign roles to previously uncharacterized genes and elucidate plant pathogenesis-response related mechanisms. This can be considered to be a case study in a citrus relative where high throughput technologies were utilized to understand defence mechanisms in <it>Fortunella </it>and citrus at the molecular level.</p> <p>Results</p> <p><b>cDNAs from sequenced kumquat libraries (ESTs) made from subtracted RNA populations, healthy vs. infected, were used to make this microarray</b>. Of 2054 selected genes on a customized array, 317 were differentially expressed (P < 0.05) in Xcc challenged kumquat plants compared to mock-inoculated ones. This study identified components of the incompatible interaction such as reactive oxygen species (ROS) and programmed cell death (PCD). Common defence mechanisms and a number of resistance genes were also identified. In addition, there were a considerable number of differentially regulated genes that had no homologues in the databases. This could be an indication of either a specialized set of genes employed by kumquat in response to canker disease or new defence mechanisms in citrus.</p> <p>Conclusion</p> <p>Functional categorization of kumquat Xcc-responsive genes revealed an enhanced defence-related metabolism as well as a number of resistant response-specific genes in the kumquat transcriptome in response to Xcc inoculation. Gene expression profile(s) were analyzed to assemble a comprehensive and inclusive image of the molecular interaction in the kumquat/Xcc system. This was done in order to elucidate molecular mechanisms associated with the development of the hypersensitive response phenotype in kumquat leaves. These data will be used to perform comparisons among citrus species to evaluate means to enhance the host immune responses against bacterial diseases.</p
Hyphal Development in Candida albicans Requires Two Temporally Linked Changes in Promoter Chromatin for Initiation and Maintenance
Phenotypic plasticity is common in development. For Candida albicans, the most common cause of invasive fungal infections in humans, morphological plasticity is its defining feature and is critical for its pathogenesis. Unlike other fungal pathogens that exist primarily in either yeast or hyphal forms, C. albicans is able to switch reversibly between yeast and hyphal growth forms in response to environmental cues. Although many regulators have been found involved in hyphal development, the mechanisms of regulating hyphal development and plasticity of dimorphism remain unclear. Here we show that hyphal development involves two sequential regulations of the promoter chromatin of hypha-specific genes. Initiation requires a rapid but temporary disappearance of the Nrg1 transcriptional repressor of hyphal morphogenesis via activation of the cAMP-PKA pathway. Maintenance requires promoter recruitment of Hda1 histone deacetylase under reduced Tor1 (target of rapamycin) signaling. Hda1 deacetylates a subunit of the NuA4 histone acetyltransferase module, leading to eviction of the NuA4 acetyltransferase module and blockage of Nrg1 access to promoters of hypha-specific genes. Promoter recruitment of Hda1 for hyphal maintenance happens only during the period when Nrg1 is gone. The sequential regulation of hyphal development by the activation of the cAMP-PKA pathway and reduced Tor1 signaling provides a molecular mechanism for plasticity of dimorphism and how C. albicans adapts to the varied host environments in pathogenesis. Such temporally linked regulation of promoter chromatin by different signaling pathways provides a unique mechanism for integrating multiple signals during development and cell fate specification
Global patient outcomes after elective surgery: prospective cohort study in 27 low-, middle- and high-income countries.
BACKGROUND: As global initiatives increase patient access to surgical treatments, there remains a need to understand the adverse effects of surgery and define appropriate levels of perioperative care. METHODS: We designed a prospective international 7-day cohort study of outcomes following elective adult inpatient surgery in 27 countries. The primary outcome was in-hospital complications. Secondary outcomes were death following a complication (failure to rescue) and death in hospital. Process measures were admission to critical care immediately after surgery or to treat a complication and duration of hospital stay. A single definition of critical care was used for all countries. RESULTS: A total of 474 hospitals in 19 high-, 7 middle- and 1 low-income country were included in the primary analysis. Data included 44 814 patients with a median hospital stay of 4 (range 2-7) days. A total of 7508 patients (16.8%) developed one or more postoperative complication and 207 died (0.5%). The overall mortality among patients who developed complications was 2.8%. Mortality following complications ranged from 2.4% for pulmonary embolism to 43.9% for cardiac arrest. A total of 4360 (9.7%) patients were admitted to a critical care unit as routine immediately after surgery, of whom 2198 (50.4%) developed a complication, with 105 (2.4%) deaths. A total of 1233 patients (16.4%) were admitted to a critical care unit to treat complications, with 119 (9.7%) deaths. Despite lower baseline risk, outcomes were similar in low- and middle-income compared with high-income countries. CONCLUSIONS: Poor patient outcomes are common after inpatient surgery. Global initiatives to increase access to surgical treatments should also address the need for safe perioperative care. STUDY REGISTRATION: ISRCTN5181700
Large expert-curated database for benchmarking document similarity detection in biomedical literature search
Document recommendation systems for locating relevant literature have mostly relied on methods developed a decade ago. This is largely due to the lack of a large offline gold-standard benchmark of relevant documents that cover a variety of research fields such that newly developed literature search techniques can be compared, improved and translated into practice. To overcome this bottleneck, we have established the RElevant LIterature SearcH consortium consisting of more than 1500 scientists from 84 countries, who have collectively annotated the relevance of over 180 000 PubMed-listed articles with regard to their respective seed (input) article/s. The majority of annotations were contributed by highly experienced, original authors of the seed articles. The collected data cover 76% of all unique PubMed Medical Subject Headings descriptors. No systematic biases were observed across different experience levels, research fields or time spent on annotations. More importantly, annotations of the same document pairs contributed by different scientists were highly concordant. We further show that the three representative baseline methods used to generate recommended articles for evaluation (Okapi Best Matching 25, Term Frequency–Inverse Document Frequency and PubMed Related Articles) had similar overall performances. Additionally, we found that these methods each tend to produce distinct collections of recommended articles, suggesting that a hybrid method may be required to completely capture all relevant articles. The established database server located at https://relishdb.ict.griffith.edu.au is freely available for the downloading of annotation data and the blind testing of new methods. We expect that this benchmark will be useful for stimulating the development of new powerful techniques for title and title/abstract-based search engines for relevant articles in biomedical research
Systematic Review of Potential Health Risks Posed by Pharmaceutical, Occupational and Consumer Exposures to Metallic and Nanoscale Aluminum, Aluminum Oxides, Aluminum Hydroxide and Its Soluble Salts
Aluminum (Al) is a ubiquitous substance encountered both naturally (as the third most abundant element) and intentionally (used in water, foods, pharmaceuticals, and vaccines); it is also present in ambient and occupational airborne particulates. Existing data underscore the importance of Al physical and chemical forms in relation to its uptake, accumulation, and systemic bioavailability. The present review represents a systematic examination of the peer-reviewed literature on the adverse health effects of Al materials published since a previous critical evaluation compiled by Krewski et al. (2007).
Challenges encountered in carrying out the present review reflected the experimental use of different physical and chemical Al forms, different routes of administration, and different target organs in relation to the magnitude, frequency, and duration of exposure. Wide variations in diet can result in Al intakes that are often higher than the World Health Organization provisional tolerable weekly intake (PTWI), which is based on studies with Al citrate. Comparing daily dietary Al exposures on the basis of “total Al”assumes that gastrointestinal bioavailability for all dietary Al forms is equivalent to that for Al citrate, an approach that requires validation. Current occupational exposure limits (OELs) for identical Al substances vary as much as 15-fold.
The toxicity of different Al forms depends in large measure on their physical behavior and relative solubility in water. The toxicity of soluble Al forms depends upon the delivered dose of Al+ 3 to target tissues. Trivalent Al reacts with water to produce bidentate superoxide coordination spheres [Al(O2)(H2O4)+ 2 and Al(H2O)6 + 3] that after complexation with O2•−, generate Al superoxides [Al(O2•)](H2O5)]+ 2. Semireduced AlO2• radicals deplete mitochondrial Fe and promote generation of H2O2, O2 • − and OH•. Thus, it is the Al+ 3-induced formation of oxygen radicals that accounts for the oxidative damage that leads to intrinsic apoptosis. In contrast, the toxicity of the insoluble Al oxides depends primarily on their behavior as particulates.
Aluminum has been held responsible for human morbidity and mortality, but there is no consistent and convincing evidence to associate the Al found in food and drinking water at the doses and chemical forms presently consumed by people living in North America and Western Europe with increased risk for Alzheimer\u27s disease (AD). Neither is there clear evidence to show use of Al-containing underarm antiperspirants or cosmetics increases the risk of AD or breast cancer. Metallic Al, its oxides, and common Al salts have not been shown to be either genotoxic or carcinogenic. Aluminum exposures during neonatal and pediatric parenteral nutrition (PN) can impair bone mineralization and delay neurological development. Adverse effects to vaccines with Al adjuvants have occurred; however, recent controlled trials found that the immunologic response to certain vaccines with Al adjuvants was no greater, and in some cases less than, that after identical vaccination without Al adjuvants.
The scientific literature on the adverse health effects of Al is extensive. Health risk assessments for Al must take into account individual co-factors (e.g., age, renal function, diet, gastric pH). Conclusions from the current review point to the need for refinement of the PTWI, reduction of Al contamination in PN solutions, justification for routine addition of Al to vaccines, and harmonization of OELs for Al substances
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