The NASA Soil Moisture Active Passive (SMAP) Mission: Overview

The Soil Moisture Active Passive (SMAP) mission is one of the first Earth observation satellites being developed by NASA in response to the National Research Council?s Decadal Survey [1]. Its mission design consists of L-band radiometer and radar instruments sharing a rotating 6-m mesh reflector antenna to provide high-resolution and high-accuracy global maps of soil moisture and freeze/thaw state every 2-3 days. The combined active/passive microwave soil moisture product will have a spatial resolution of 10 km and a mean latency of 24 hours. In addition, the SMAP surface observations will be combined with advanced modeling and data assimilation to provide deeper root zone soil moisture and net ecosystem exchange of carbon. SMAP is expected to launch in the late 2014 - early 2015 time frame

The NASA Soil Moisture Active Passive (SMAP) Mission - Algorithm and Cal/Val Activities and Synergies with SMOS and Other L-Band Missions

NASA's Soil Moisture Active Passive (SMAP) mission, planned for launch in late 2014, has as its key measurement objective the frequent, global mapping of near-surface soil moisture and its freeze-thaw state. SMAP soil moisture and freeze/thaw measurements at 10 km and 3 km resolutions respectively, would enable significantly improved estimates of water, energy and carbon transfers between the land and atmosphere. Soil moisture control of these fluxes is a key factor in the performance of atmospheric models used for weather forecasts and climate projections Soil moisture measurements are also of great importance in assessing floods and for monitoring drought. In addition, observations of soil moisture and freeze/thaw timing over the boreal latitudes can help reduce uncertainties in quantifying the global carbon balance. The SMAP measurement concept utilizes an L-band radar and radiometer sharing a rotating 6-meter mesh reflector antenna. The SMAP radiometer and radar flight hardware and ground processing designs are incorporating approaches to identify and mitigate potential terrestrial radio frequency interference (RFI). The radar and radiometer instruments are planned to operate in a 680 km polar orbit, viewing the surface at a constant 40-degree incidence angle with a 1000-km swath width, providing 3-day global coverage. Data from the instruments would yield global maps of soil moisture and freeze/thaw state to be provided at 10 km and 3 km resolutions respectively, every two to three days. Plans are to provide also a radiometer-only soil moisture product at 40-km spatial resolution. This product and the underlying brightness temperatures have characteristics similar to those provided by the Soil Moisture and Ocean Salinity (SMOS) mission. As a result, there are unique opportunities for common data product development and continuity between the two missions. SMAP also has commonalities with other satellite missions having L-band radiometer and/or radar sensors applicable to soil moisture measurement, such as Aquarius, SAO COM, and ALOS-2. The algorithms and data products for SMAP are being developed in the SMAP Science Data System (SDS) Testbed. The algorithms are developed and evaluated in the SDS Testbed using simulated SMAP observations as well as observational data from current airborne and spaceborne L-band sensors including SMOS. The SMAP project is developing a Calibration and Validation (Cal/Val) Plan that is designed to support algorithm development (pre-launch) and data product validation (post-launch). A key component of the Cal/Val Plan is the identification, characterization, and instrumentation of sites that can be used to calibrate and validate the sensor data (Level I) and derived geophysical products (Level 2 and higher). In this presentation we report on the development status of the SMAP data product algorithms, and the planning and implementation of the SMAP Cal/Val program. Several components of the SMAP algorithm development and Cal/Val plans have commonality with those of SMOS, and for this reason there are shared activities and resources that can be utilized between the missions, including in situ networks, ancillary data sets, and long-term monitoring sites

Fostering Application Opportunites for the NASA Soil Moisture Active Passive (SMAP) Mission

The NASA Soil Moisture Active Passive (SMAP) Mission will provide global observations of soil moisture and freeze/thaw state from space. We outline how priority applications contributed to the SMAP mission measurement requirements and how the SMAP mission plans to foster applications and applied science

NASA Soil Moisture Active Passive (SMAP) Mission Formulation

The Soil Moisture Active Passive (SMAP) Mission is one of the first Earth observation satellites being formulated by NASA in response to the 2007 National Research Council s Earth Science Decadal Survey [1]. SMAP s measurement objectives are high-resolution global measurements of near-surface soil moisture and its freeze-thaw state. These measurements would allow significantly improved estimates of water, energy and carbon transfers between the land and atmosphere. The soil moisture control of these fluxes is a key factor in the performance of atmospheric models used for weather forecasts and climate projections. Soil moisture measurements are also of great importance in assessing flooding and monitoring drought. Knowledge gained from SMAP s planned observations can help mitigate these natural hazards, resulting in potentially great economic and societal benefits. SMAP measurements would also yield high resolution spatial and temporal mapping of the frozen or thawed condition of the surface soil and vegetation. Observations of soil moisture and freeze/thaw timing over the boreal latitudes will contribute to reducing a major uncertainty in quantifying the global carbon balance and help resolve an apparent missing carbon sink over land. The SMAP mission would utilize an L-band radar and radiometer sharing a rotating 6-meter mesh reflector antenna (see Figure 1) [2]. The radar and radiometer instruments would be carried onboard a 3-axis stabilized spacecraft in a 680 km polar orbit with an 8-day repeating ground track. The instruments are planned to provide high-resolution and high-accuracy global maps of soil moisture at 10 km resolution and freeze/thaw at 3 km resolution, every two to three days (see Table 1 for a list of science data products). The mission is adopting a number of approaches to identify and mitigate potential terrestrial radio frequency interference (RFI). These approaches are being incorporated into the radiometer and radar flight hardware and ground processing designs

The Soil Moisture Active Passive Mission (SMAP) Science Data Products: Results of Testing with Field Experiment and Algorithm Testbed Simulation Environment Data

Talk outline 1. Derivation of SMAP basic and applied science requirements from the NRC Earth Science Decadal Survey applications 2. Data products and latencies 3. Algorithm highlights 4. SMAP Algorithm Testbed 5. SMAP Working Groups and community engagemen

SPEDRE: a web server for estimating rate parameters for cell signaling dynamics in data-rich environments

Cell signaling pathways and metabolic networks are often modeled using ordinary differential equations (ODEs) to represent the production/consumption of molecular species over time. Regardless whether a model is built de novo or adapted from previous models, there is a need to estimate kinetic rate constants based on time-series experimental measurements of molecular abundance. For data-rich cases such as proteomic measurements of all species, spline-based parameter estimation algorithms have been developed to avoid solving all the ODEs explicitly. We report the development of a web server for a spline-based method. Systematic Parameter Estimation for Data-Rich Environments (SPEDRE) estimates reaction rates for biochemical networks. As input, it takes the connectivity of the network and the concentrations of the molecular species at discrete time points. SPEDRE is intended for large sparse networks, such as signaling cascades with many proteins but few reactions per protein. If data are available for all species in the network, it provides global coverage of the parameter space, at low resolution and with approximate accuracy. The output is an optimized value for each reaction rate parameter, accompanied by a range and bin plot. SPEDRE uses tools from COPASI for pre-processing and post-processing. SPEDRE is a free service at http://LTKLab.org/SPEDRE.Singapore-MIT Alliance (IUP R-154-001-348-646

Expressions 1989

https://openspace.dmacc.edu/expressions/1011/thumbnail.jp

Root Hair Mutations Displace the Barley Rhizosphere Microbiota

The rhizosphere, the thin layer of soil surrounding and influenced by plant roots, defines a distinct and selective microbial habitat compared to unplanted soil. The microbial communities inhabiting the rhizosphere, the rhizosphere microbiota, engage in interactions with their host plants which span from parasitism to mutualism. Therefore, the rhizosphere microbiota emerges as one of the determinants of yield potential in crops. Studies conducted with different plant species have unequivocally pointed to the host plant as a driver of the microbiota thriving at the root–soil interface. Thus far, the host genetic traits shaping the rhizosphere microbiota are not completely understood. As root hairs play a critical role in resource exchanges between plants and the rhizosphere, we hypothesized that they can act as a determinant of the microbiota thriving at the root–soil interface. To test this hypothesis, we took advantage of barley (Hordeum vulgare) mutant lines contrasting for their root hair characteristics. Plants were grown in two agricultural soils, differentiating in their organic matter contents, under controlled environmental conditions. At early stem elongation rhizosphere specimens were collected and subjected to high-resolution 16S rRNA gene profiling. Our data revealed that the barley rhizosphere microbiota is largely dominated by members of the phyla Bacteroidetes and Proteobacteria, regardless of the soil type and the root hair characteristics of the host plant. Conversely, ecological indices calculated using operational taxonomic units (OTUs) presence, abundance, and phylogeny revealed a significant impact of root hair mutations on the composition of the rhizosphere microbiota. In particular, our data indicate that mutant plants host a reduced-complexity community compared to wild-type genotypes and unplanted soil controls. Congruently, the host genotype explained up to 18% of the variation in ecological distances computed for the rhizosphere samples. Importantly, this effect is manifested in a soil-dependent manner. A closer inspection of the sequencing profiles revealed that the root hair-dependent diversification of the microbiota is supported by a taxonomically narrow group of bacteria, with a bias for members of the orders Actinomycetales, Burkholderiales, Rhizobiales, Sphingomonadales, and Xanthomonadales. Taken together, our results indicate that the presence and function of root hairs are a determinant of the bacterial community thriving in the rhizosphere and their perturbations can markedly impact on the recruitment of individual members of the microbiota

NASA's Soil Moisture Active and Passive (SMAP) Mission

The Soil Moisture Active-Passive (SMAP) Mission is one of the first Earth observation satellites being formulated by NASA in response to the 2007 National Research Council s Decadal Survey. SMAP will make global measurements of soil moisture at the Earth's land surface and its freeze-thaw state. These measurements will allow significantly improved estimates of water, energy and carbon transfers between the land and atmosphere. Soil moisture measurements are also of great importance in assessing flooding and monitoring drought. Knowledge gained from SMAP observations can help mitigate these natural hazards, resulting in potentially great economic and social benefits. SMAP observations of soil moisture and freeze/thaw timing over the boreal latitudes will also reduce a major uncertainty in quantifying the global carbon balance and help to resolve an apparent missing carbon sink over land. The SMAP mission concept will utilize an L-band radar and radiometer sharing a rotating 6-meter mesh reflector antenna flying in a 680 km polar orbit with an 8-day exact ground track repeat aboard a 3-axis stabilized spacecraft to provide high-resolution and high-accuracy global maps of soil moisture and freeze/thaw state every two to three days. In addition, the SMAP project will use these surface observations with advanced modeling and data assimilation to provide estimates of deeper root-zone soil moisture and net ecosystem exchange of carbon. SMAP recently completed its Phase A Mission Concept Study Phase for NASA and transitioned into Phase B (Formulation and Detailed Design). A number of significant accomplishments occurred during this initial phase of mission development. The SMAP project held several open meetings to solicit community feedback on possible science algorithms, prepared preliminary draft Algorithm Theoretical Basis Documents (ATBDs) for each mission science product, and established a prototype algorithm testbed to enable testing and evaluation of the performance of candidate algorithms. SMAP conducted an Applications Workshop in September 2009 to coordinate with potential application users interested in the mission data. A draft Applications Plan describing the Project s planned outreach to potential applications users has been prepared and will be updated during Phase B. SMAP made a significant evaluation of the potential terrestrial radio frequency interference (RFI) source environment and established radiometer and radar flight hardware and ground processing mitigation approaches. SMAP finalized its science orbit and orbit injection approach to optimize launch mass and prepared launch and commissioning scenarios and timeline. A science data communications approach was developed to maximize available science data volume to improve science margins while maintaining moderately short data product latencies to support many potential applications using existing ground assets and with minimum impact to the flight system. SMAP developed rigid multi-body and flexible body dynamics and control models and system designs for the 6-meter rotating instrument reflector-boom assembly (RBA) and flight system to confirm pointing and control performance, and devised strategies to efficiently implement on-orbit balancing if needed. Industry partners were selected for the spin mechanism assembly (SMA) and RBA. Preliminary designs for the radar and radiometer were initiated, including constructing breadboards of key assemblies

Morphological and geochemical variations along the eastern Galapagos Spreading Center

[1] As the eastern Galápagos Spreading Center (GSC) shallows westward toward the Galápagos Archipelago, axial morphology evolves from a low-relief, valley-and-ridge terrain to an increasingly prominent axial ridge, closely mirroring the western GSC. Between the Inca Transform (∼85.5°W) and its western termination near 91°W, the eastern GSC comprises seven morphological segments, separated by five morphological discontinuities and the eastward propagating 87°W overlapping spreading center. Combined morphologic and geochemical data divide the eastern GSC into two domains independent of the fine-scale morphologic segmentation. The western domain is defined by its axial ridge morphology and highly variable lava population. Elemental data define steep along-axis gradients, reflecting a complex source that includes one or more hot spot–related components in addition to a highly depleted component. The eastern domain is defined by transitional, valley-and-ridge morphologies and a surprisingly invariant lava population. This population is dominated by shallow crystal fractionation processes and displays significantly less variability attributable to multiple source components. The Galápagos hot spot has long been known to have a symmetrical, long-wavelength influence on crustal accretion along the GSC. Existing isotopic and new elemental data define twin “geochemical peaks” that we interpret as loci for transfer of distinct source components from the Galápagos plume to the GSC. Although Na8 and Fe8 values lie within the negatively correlated global array, Na8 increases with decreasing axial depth, contrary to global trends and consistent with emerging deep, hydrous melting models that predict decreasing overall extent of melting despite increasing melt production. Support for hydrous melting comes from decreasing heavy REE, increasing La/Sm and La/Yb, and the systematics of decreasing FeO and increasing CaO and Al2O3 with decreasing distance to the hot spot. Overall, an enriched, deep melt component appears to coexist in the shallow mantle with a ubiquitous, depleted primitive melt component, consistent with new models for channelized melt flow connecting a deep hydrous melt regime with the dry shallow mantle. Nevertheless, an absence of low-Fe lavas suggests that hydrous melting is strictly limited beneath the eastern GSC, becoming dominant only near the western geochemical peak where input from a hydrous “Northern” or “Wolf-Darwin” plume component is inferred