38 research outputs found
A novel framework to investigate wind-driven snow redistribution over an Alpine glacier: combination of high-resolution terrestrial laser scans and large-eddy simulations
Wind-driven snow redistribution affects the glacier mass balance by eroding or depositing mass from or to different parts of the glacier’s surface. High-resolution observations are used to test the ability of large-eddy simulations as a tool for distributed mass balance modeling. We present a case study of observed and simulated snow redistribution over Hintereisferner glacier (Ötztal Alps, Austria) between 6 and 9 February 2021. Observations consist of three high-resolution digital elevation models (Δx=1 m) derived from terrestrial laser scans taken shortly before, directly after, and 15 h after snowfall. The scans are complemented by datasets from three on-site weather stations. After the snowfall event, we observed a snowpack decrease of 0.08 m on average over the glacier. The decrease in the snow depth can be attributed to post-snowfall compaction and the wind-driven redistribution of snow. Simulations were performed with the Weather Research and Forecasting (WRF) model at Δx=48 m with a newly implemented snow drift module. The spatial patterns of the simulated snow redistribution agree well with the observed generalized patterns. Snow redistribution contributed −0.026 m to the surface elevation decrease over the glacier surface on 8 February, resulting in a mass loss of −3.9 kg m−2, which is on the same order of magnitude as the observations. With the single case study we cannot yet extrapolate the impact of post-snowfall events on the seasonal glacier mass balance, but the study shows that the snow drift module in WRF is a powerful tool to improve knowledge on wind-driven snow redistribution patterns over glaciers.Austrian Science FundDeutsche ForschungsgemeinschaftPeer Reviewe
Immunohistochemical characterization of type II pneumocyte proliferation after PRRSV (Type I) challenge
The study aimed to histologically and immunohistochemically characterize lung lesions after a challenge with a recently isolated PRRSV field strain in growing pigs 10 and 21 days post infection (DPI).
In the first phase of the study lung lesions were evaluated microscopically on routine haematoxylin and eosin stained slides. The evaluation was performed as a blinded analysis and the lesions were scored based on the following criteria: (1) pneumocyte hypertrophy and hyperplasia, (2) septal mononuclear infiltration, (3) intraalveolar necrotic debris, (4) intraalveolar inflammatory cell accumulation and (5) perivascular inflammatory cell accumulation.
For further characterization of the lung lesions, immunohistochemical stainings were performed using anti-cytokeratin, anti-Ki67, anti-TTF-1 (Thyroid Transcription Factor-1), anti-myeloid receptor (MAC387), and anti-PRRSV antibodies to identify alveolar epithelial cells, proliferating cells, type II pneumocytes, macrophages, and PRRSV antigen, respectively. The evaluation of the immunohistochemical stainings revealed that humanized anti TTF-1 antibodies can successfully identify type II pneumocytes in porcine lung tissue. Marked proliferation of these cells was confirmed by a significant (p<0.05) increase of TTF-1 positive cells in acute cases compared to the lungs of control pigs. Cytokeratin labeling marked the type I, and type II pneumocytes as well as bronchial epithelial cells, however this staining was not suitable for cell counting purposes.
When the routine histological scores were compared to the number of immunohistochemically positive cells, Ki67 cell counts were found to show positive correlation (p<0.05) with the overall severity of the lesions
Mycolactone Gene Expression Is Controlled by Strong SigA-Like Promoters with Utility in Studies of Mycobacterium ulcerans and Buruli Ulcer
Mycolactone A/B is a lipophilic macrocyclic polyketide that is the primary virulence factor produced by Mycobacterium ulcerans, a human pathogen and the causative agent of Buruli ulcer. In M. ulcerans strain Agy99 the mycolactone polyketide synthase (PKS) locus spans a 120 kb region of a 174 kb megaplasmid. Here we have identified promoter regions of this PKS locus using GFP reporter assays, in silico analysis, primer extension, and site-directed mutagenesis. Transcription of the large PKS genes mlsA1 (51 kb), mlsA2 (7 kb) and mlsB (42 kb) is driven by a novel and powerful SigA-like promoter sequence situated 533 bp upstream of both the mlsA1 and mlsB initiation codons, which is also functional in Escherichia coli, Mycobacterium smegmatis and Mycobacterium marinum. Promoter regions were also identified upstream of the putative mycolactone accessory genes mup045 and mup053. We transformed M. ulcerans with a GFP-reporter plasmid under the control of the mls promoter to produce a highly green-fluorescent bacterium. The strain remained virulent, producing both GFP and mycolactone and causing ulcerative disease in mice. Mosquitoes have been proposed as a potential vector of M. ulcerans so we utilized M. ulcerans-GFP in microcosm feeding experiments with captured mosquito larvae. M. ulcerans-GFP accumulated within the mouth and midgut of the insect over four instars, whereas the closely related, non-mycolactone-producing species M. marinum harbouring the same GFP reporter system did not. This is the first report to identify M. ulcerans toxin gene promoters, and we have used our findings to develop M. ulcerans-GFP, a strain in which fluorescence and toxin gene expression are linked, thus providing a tool for studying Buruli ulcer pathogenesis and potential transmission to humans
Hypertrophic cardiomyopathy is characterized by alterations of the mitochondrial calcium uniporter complex proteins: insights from patients with aortic valve stenosis versus hypertrophic obstructive cardiomyopathy
Introduction: Hypertrophies of the cardiac septum are caused either by aortic valve stenosis (AVS) or by congenital hypertrophic obstructive cardiomyopathy (HOCM). As they induce cardiac remodeling, these cardiac pathologies may promote an arrhythmogenic substrate with associated malignant ventricular arrhythmias and may lead to heart failure. While altered calcium (Ca2+) handling seems to be a key player in the pathogenesis, the role of mitochondrial calcium handling was not investigated in these patients to date.Methods: To investigate this issue, cardiac septal samples were collected from patients undergoing myectomy during cardiac surgery for excessive septal hypertrophy and/or aortic valve replacement, caused by AVS and HOCM. Septal specimens were matched with cardiac tissue obtained from post-mortem controls without cardiac diseases (Ctrl).Results and discussion: Patient characteristics and most of the echocardiographic parameters did not differ between AVS and HOCM. Most notably, the interventricular septum thickness, diastolic (IVSd), was the greatest in HOCM patients. Histological and molecular analyses showed a trend towards higher fibrotic burden in both pathologies, when compared to Ctrl. Most notably, the mitochondrial Ca2+ uniporter (MCU) complex associated proteins were altered in both pathologies of left ventricular hypertrophy (LVH). On the one hand, the expression pattern of the MCU complex subunits MCU and MICU1 were shown to be markedly increased, especially in AVS. On the other hand, PRMT-1, UCP-2, and UCP-3 declined with hypertrophy. These conditions were associated with an increase in the expression patterns of the Ca2+ uptaking ion channel SERCA2a in AVS (p = 0.0013), though not in HOCM, compared to healthy tissue. Our data obtained from human specimen from AVS or HOCM indicates major alterations in the expression of the mitochondrial calcium uniporter complex and associated proteins. Thus, in cardiac septal hypertrophies, besides modifications of cytosolic calcium handling, impaired mitochondrial uptake might be a key player in disease progression
Attenuation of Congenital Portosystemic Shunt Reduces Inflammation in Dogs
Liver disease is a major cause of morbidity and mortality. One of the most significant complications in patients with liver disease is the development of neurological disturbances, termed hepatic encephalopathy. The pathogenesis of hepatic encephalopathy is incompletely understood, which has resulted in the development of a wide range of experimental models. Congenital portosystemic shunt is one of the most common congenital disorders diagnosed in client owned dogs. Our recent studies have demonstrated that the pathophysiology of canine hepatic encephalopathy is very similar to human hepatic encephalopathy, which provides strong support for the use of dogs with a congenital portosystemic shunt as a naturally occurring model of human hepatic encephalopathy. Specifically, we have demonstrated an important role for ammonia and inflammation in the development of hepatic encephalopathy in dogs with a congenital portosystemic shunt. Despite the apparent importance of inflammation in driving hepatic encephalopathy in dogs, it is unclear whether inflammation resolves following the successful treatment of liver disease. We hypothesized that haematological and biochemical evidence of inflammation, as gauged by neutrophil, lymphocyte and monocyte concentrations together with C-reactive protein concentrations, would decrease following successful treatment of congenital portosystemic shunts in dogs. One hundred and forty dogs with a congenital portosystemic shunt were enrolled into the study. We found that the proportion of dogs with a monocyte concentration above the reference range was significantly greater in dogs with hepatic encephalopathy at time of initial diagnosis. Importantly, neutrophil and monocyte concentrations significantly decreased following surgical congenital portosystemic shunt attenuation. We also found a significant decrease in C-reactive protein concentrations following surgical attenuation of congenital portosystemic shunts. Our study demonstrates that haematological and biochemical indices of inflammation reduce following successful treatment of the underlying liver disorder
Investigating wind-driven Snow Redistribution Processes over an Alpine Glacier with high-resolution Terrestrial Laser Scans and Large-eddy Simulations
Wind-driven snow redistribution affects the glacier mass balance by eroding or depositing mass from or to different parts of the glacier’s surface. High-resolution observations are used to test the ability of large eddy simulations as a tool for distributed mass balance modeling. We present a case study of observed and simulated snow redistribution over Hintereisferner glacier (Ötztal Alps, Austria) between 6 and 9 February 2021. Observations consist of three high-resolution Digital Elevation Models (∆x=1 m) derived from terrestrial laser scans taken shortly before, directly after, and 15 hours after snowfall. The scans are complemented by data sets from three onsite weather stations. After the snow fall event the snowpack decreased by 0.08 m on average over the glacier and typical snow redistribution patterns were observed. The decrease of the snow depth is to be attributed to both post-snowfall compaction and redistribution of snow. Simulations were performed with the WRF model at ∆x=48 m with a newly implemented snow drift module. The spatial patterns of the simulated snow redistribution agree well with the observed generalized patterns. Snow redistribution contributed -0.026 m to the surface elevation decrease over the glacier surface on 8 Feb, resulting in a mass loss of -3.9 kg m−2, which is in the same order of magnitude as the observations. With the single case study we cannot yet extrapolate to the impact of post-snowfall events on the seasonal glacier mass balance, but the study shows that the snow drift module in WRF is a powerful tool to improve knowledge on snow redistribution over glaciers and that the model setup can be applied to other mountain glaciers
Uncertainty assessment of a permanent long-range terrestrial laser scanning system for the quantification of snow dynamics on Hintereisferner (Austria)
A permanently installed terrestrial laser scanner (TLS) helps to investigate surface changes at high spatio-temporal resolution. Previous studies show that the annual and seasonal glacier volume, and subsequently the mass balance, can be measured by TLSs. This study systematically identifies and quantifies uncertainties and their sources of the permanent long-range TLS system at Hintereisferner glacier (Ötztal Alps, Austria) in order to assess its potential and limitations for detecting glaciologically relevant small-scale surface elevation changes, such as snowfall and redistribution events. Five uncertainty sources are analyzed: the registration method, the influence of the instrument and hardware limitations of the TLS, the effect of atmospheric conditions on the laser beam, the scanning geometry, and the uncertainty caused by rasterization. The instrument and hardware limitations cause the largest uncertainty to the TLS data, followed by the scanning geometry and influence of varying atmospheric conditions on the laser beam. The magnitude of each uncertainty source depends on the distance (range) between the TLS and the target surface, showing a strong decrease of the obtained spatial resolution and a concurrent increase in uncertainty with increasing distance. An automated registration method results in an uncertainty of ±0.50 m at grids of 100 by 100 m. After post-processing, a 0.1-m vertical accuracy can be obtained allowing the detection of surface changes of respective magnitudes and especially making it possible to quantify snow dynamics at Hintereisferner.ISSN:2296-646
Snowdrift scheme in the Weather Research and Forecasting model
Wind-driven redistribution of snow is one of the key factors leading to heterogeneous accumulation of snow at small scales. Understanding these processes is, therefore, of great importance to many glaciological and hydrological questions. High-quality information on the wind field is necessary to realistically represent drifting snow. Here, we introduce a novel, intermediate-complexity drifting and blowing snow module for the Weather Research and Forecasting (WRF) model that integrates seamlessly into the standard WRF infrastructure. The module also accounts for snow particle sublimation and considers the thermodynamic feedback on the atmospheric fields. The module was tested in an idealized model environment. The simple and computationally efficient implementation allows this module to be used for small-scale and large-scale simulations in polar and glaciated regions