Solar wind disturbances in th outer heliosphere caused by successive solar flares from the same active region

Solar wind disturbances caused by successive flares from the same active region are traced to about 20 AU, using the modeling method developed by Hakamada and Akasofu (1982). It is shown that the flare-generated shock waves coalesce with the co-rotating interaction region of the interplanetary magnetic field, resulting in a large-scale magnetic field structure in the outer heliosphere. Such a structure may have considerable effects on the propagation of galactic cosmic rays

Unravelling the Yeast Cell Cycle Using the TriGen Algorithm

Analyzing microarray data represents a computational challenge due to the characteristics of these data. Clustering techniques are widely applied to create groups of genes that exhibit a similar behavior under the conditions tested. Biclustering emerges as an improvement of classical clustering since it relaxes the constraints for grouping allowing genes to be evaluated only under a subset of the conditions and not under all of them. However, this technique is not appropriate for the analysis of temporal microarray data in which the genes are evaluated under certain conditions at several time points. In this paper, we present the results of applying the TriGen algorithm, a genetic algorithm that finds triclusters that take into account the experimental conditions and the time points, to the yeast cell cycle problem, where the goal is to identify all genes whose expression levels are regulated by the cell cycle

Solar Wind and its Evolution

By using our previous results of magnetohydrodynamical simulations for the solar wind from open flux tubes, I discuss how the solar wind in the past is different from the current solar wind. The simulations are performed in fixed one-dimensional super-radially open magnetic flux tubes by inputing various types of fluctuations from the photosphere, which automatically determines solar wind properties in a forward manner. The three important parameters which determine physical properties of the solar wind are surface fluctuation, magnetic field strengths, and the configuration of magnetic flux tubes. Adjusting these parameters to the sun at earlier times in a qualitative sense, I infer that the quasi-steady-state component of the solar wind in the past was denser and slightly slower if the effect of the magneto-centrifugal force is not significant. I also discuss effects of magneto-centrifugal force and roles of coronal mass ejections.Comment: 6 pages, 1 figure, Earth, Planets, & Space in press (based on 5th Alfven Conference) correction of discussion on a related pape

4pi Models of CMEs and ICMEs

Coronal mass ejections (CMEs), which dynamically connect the solar surface to the far reaches of interplanetary space, represent a major anifestation of solar activity. They are not only of principal interest but also play a pivotal role in the context of space weather predictions. The steady improvement of both numerical methods and computational resources during recent years has allowed for the creation of increasingly realistic models of interplanetary CMEs (ICMEs), which can now be compared to high-quality observational data from various space-bound missions. This review discusses existing models of CMEs, characterizing them by scientific aim and scope, CME initiation method, and physical effects included, thereby stressing the importance of fully 3-D ('4pi') spatial coverage.Comment: 14 pages plus references. Comments welcome. Accepted for publication in Solar Physics (SUN-360 topical issue

Sharp changes of solar wind ion flux and density within and outside current sheets

Analysis of the Interball-1 spacecraft data (1995-2000) has shown that the solar wind ion flux sometimes increases or decreases abruptly by more than 20% over a time period of several seconds or minutes. Typically, the amplitude of such sharp changes in the solar wind ion flux (SCIFs) is larger than 0.5x10^8 cm^-2 s^-1. These sudden changes of the ion flux were also observed by the Solar Wind Experiment (SWE), on board the WIND spacecraft, as the solar wind density increases and decreases with negligible changes in the solar wind velocity. SCIFs occur irregularly at 1 AU, when plasma flows with specific properties come to the Earth's orbit. SCIFs are usually observed in slow, turbulent solar wind with increased density and interplanetary magnetic field strength. The number of times SCIFs occur during a day is simulated using the solar wind density, magnetic field, and their standard deviations as input parameters for a period of 5 years. A correlation coefficient of ~0.7 is obtained between the modelled and the experimental data. It is found that SCIFs are not associated with coronal mass ejections (CMEs), corotating interaction regions (CIRs), or interplanetary shocks; however, 85% of the sector boundaries are surrounded by SCIFs. The properties of the solar wind plasma for days with 5 or more SCIF observations are the same as those of the solar wind plasma at the sector boundaries. One possible explanation for the occurrence of SCIFs (near sector boundaries) is magnetic reconnection at the heliospheric current sheet or local current sheets. Other probable causes of SCIFs (inside sectors) are turbulent processes in the slow solar wind and at the crossings of flux tubes.Comment: 33 pages, 8 figures, 6 tables, Solar Physics 2011, in pres

A multi-species synthesis of physiological mechanisms in drought-induced tree mortality

Widespread tree mortality associated with drought 92 has been observed on all forested continents, and global change is expected to exacerbate vegetation vulnerability. Forest mortality has implications for future biosphere-atmosphere interactions of carbon, water, and energy balance, and is poorly represented in dynamic vegetation models. Reducing uncertainty requires improved mortality projections founded on robust physiological processes. However, the proposed mechanisms of drought-induced mortality, including hydraulic failure and carbon starvation, are unresolved. A growing number of empirical studies have investigated these mechanisms, but data have not been consistently analyzed across species and biomes using a standardized physiological framework. Here we show that xylem hydraulic failure was ubiquitous across multiple tree taxa at drought induced mortality. All species assessed had 60% or higher loss of xylem hydraulic conductivity, consistent with proposed theoretical and modelled survival thresholds. We found diverse responses in non-structural carbohydrate reserves at mortality, indicating that evidence supporting carbon starvation was not universal. Reduced non-structural carbohydrates were more common for gymnosperms than angiosperms, associated with xylem hydraulic vulnerability, and may have a role in reducing hydraulic function. Our finding that hydraulic failure at drought-induced mortality was persistent across species indicates that substantial improvement in vegetation modelling can be achieved using thresholds in hydraulic function

A multi-species synthesis of physiological mechanisms in drought-induced tree mortality

Widespread tree mortality associated with drought 92 has been observed on all forested continents, and global change is expected to exacerbate vegetation vulnerability. Forest mortality has implications for future biosphere-atmosphere interactions of carbon, water, and energy balance, and is poorly represented in dynamic vegetation models. Reducing uncertainty requires improved mortality projections founded on robust physiological processes. However, the proposed mechanisms of drought-induced mortality, including hydraulic failure and carbon starvation, are unresolved. A growing number of empirical studies have investigated these mechanisms, but data have not been consistently analyzed across species and biomes using a standardized physiological framework. Here we show that xylem hydraulic failure was ubiquitous across multiple tree taxa at drought induced mortality. All species assessed had 60% or higher loss of xylem hydraulic conductivity, consistent with proposed theoretical and modelled survival thresholds. We found diverse responses in non-structural carbohydrate reserves at mortality, indicating that evidence supporting carbon starvation was not universal. Reduced non-structural carbohydrates were more common for gymnosperms than angiosperms, associated with xylem hydraulic vulnerability, and may have a role in reducing hydraulic function. Our finding that hydraulic failure at drought-induced mortality was persistent across species indicates that substantial improvement in vegetation modelling can be achieved using thresholds in hydraulic function