1,869 research outputs found

    The Theory of Falling Shadows Applied to -Ideals in -Algebras

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    On the basis of the theory of a falling shadow which was first formulated by Wang (1985), the notion of falling ∗-ideals in -algebras is introduced, and related properties are investigated. Characterizations of a falling ∗-ideal are established. Relations among falling ∗-ideals, falling -ideals, falling #-ideals, falling -subalgebras, and falling BCK-ideals are discussed

    SOLiDzipper: A High Speed Encoding Method for the Next-Generation Sequencing Data

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    Background Next-generation sequencing (NGS) methods pose computational challenges of handling large volumes of data. Although cloud computing offers a potential solution to these challenges, transferring a large data set across the internet is the biggest obstacle, which may be overcome by efficient encoding methods. When encoding is used to facilitate data transfer to the cloud, the time factor is equally as important as the encoding efficiency. Moreover, to take advantage of parallel processing in cloud computing, a parallel technique to decode and split compressed data in the cloud is essential. Hence in this review, we present SOLiDzipper, a new encoding method for NGS data. Methods The basic strategy of SOLiDzipper is to divide and encode. NGS data files contain both the sequence and non-sequence information whose encoding efficiencies are different. In SOLiDzipper, encoded data are stored in binary data block that does not contain the characteristic information of a specific sequence platform, which means that data can be decoded according to a desired platform even in cases of Illumina, Solexa or Roche 454 data. Results The main calculation time using Crossbow was 173 minutes when 40 EC2 nodes were involved. In that case, an analysis preparation time of 464 minutes is required to encode data in the latest DNA compression method like G-SQZ and transmit it on a 183 Mbit/s bandwidth. However, it takes 194 minutes to encode and transmit data with SOLiDzipper under the same bandwidth conditions. These results indicate that the entire processing time can be reduced according to the encoding methods used, under the same network bandwidth conditions. Considering the limited network bandwidth, high-speed, high-efficiency encoding methods such as SOLiDzipper can make a significant contribution to higher productivity in labs seeking to take advantage of the cloud as an alternative to local computing. Availability http://szipper.dinfree.com . Academic/non-profit: Binary available for direct download at no cost. For-profit: Submit request for for-profit license from the web-site

    Proto-type installation of a double-station system for the optical-video-detection and orbital characterisation of a meteor/fireball in South Korea

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    We give a detailed description of the installation and operation of a double-station meteor detection system which formed part of a research & education project between Korea Astronomy Space Science Institute and Daejeon Science Highschool. A total of six light-sensitive CCD cameras were installed with three cameras at SOAO and three cameras at BOAO observatory. A double-station observation of a meteor event enables the determination of the three-dimensional orbit in space. This project was initiated in response to the Jinju fireball event in March 2014. The cameras were installed in October/November 2014. The two stations are identical in hardware as well as software. Each station employes sensitive Watec-902H2 cameras in combination with relatively fast f/1.2 lenses. Various fields of views were used for measuring differences in detection rates of meteor events. We employed the SonotaCo UFO software suite for meteor detection and their subsequent analysis. The system setup as well as installation/operation experience is described and first results are presented. We also give a brief overview of historic as well as recent meteor (fall) detections in South Korea. For more information please consult http://meteor.kasi.re.kr .Comment: Technical/instrumentation description of a professional meteor detection system, 23 pages, 20 figures (color/monochrome), 5 tables, submitted to the Journal of Korean Astronomical Society (JKAS, http://jkas.kas.org/, http://jkas.kas.org/history.html

    Structural performance experiment by moving cart to mount measurement sensors

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    The development of a measurement system for the purpose of structural performance evaluation has been needed. This work introduces a moving cart system on which to mount measurement sensors to measure acceleration and sound pressure in the time domain and an impact hammer for external excitation. The measurement data are utilized to evaluate the structural performance based on a mixed approach to directly and indirectly collect response data by a microphone and an accelerometer, respectively. The reliability of the measurement data is improved by the utilization of multiple sensors. The structural state is investigated by the power spectral density estimate (PSE) or proper orthogonal mode (POM) of the sound pressure and acceleration data. The applicability of the system is illustrated in a field test

    Non-Hodgkin's lymphoma of the sphenoid sinus presenting as isolated oculomotor nerve palsy

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    BACKGROUND: Solitary involvement of the sphenoid sinus has rarely been reported in non-Hodgkin's lymphoma. Isolated oculomotor nerve palsy is uncommon as an initial presentation of malignant tumors of the sphenoid sinus. CASE PRESENTATION: A 53-year-old woman presented with a three-month history of headache and diplopia. Neurological examination revealed complete left oculomotor nerve palsy. Magnetic Resonance Imaging (MRI) demonstrated a homogenous soft-tissue lesion occupying the left sphenoid sinus and invading the left cavernous sinus. The patient underwent transsphenoidal biopsy and the lesion was histologically diagnosed as non-Hodgkin's lymphoma, diffuse large B-cell type. Tumor cells were positive for CD20 and negative for CD3. Following six cycles of chemotherapy, the left oculomotor nerve palsy that had been previously observed was completely resolved. There was no enhancing lesion noted on follow-up MRI. CONCLUSION: It is important to recognize that non-Hodgkin's lymphoma of the sphenoid sinus can present with isolated oculomotor nerve palsy, although it is extremely rare. The cranial nerve deficits can resolve dramatically after chemotherapy.ope

    Active site phosphoryl groups in the biphosphorylated phosphotransferase complex reveal dynamics in a millisecond time scale

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    AbstractThe N-terminal domain of Enzyme I (EIN) and phosphocarrier HPr can form a biphosphorylated complex when they are both phosphorylated by excess cellular phosphoenolpyruvate. Here we show that the electrostatic repulsion between the phosphoryl groups in the biphosphorylated complex results in characteristic dynamics at the active site in a millisecond time scale. The dynamics is localized to phospho-His15 and the stabilizing backbone amide groups of HPr, and does not impact on the phospho-His189 of EIN. The dynamics occurs with the kex of ∼500s−1 which compares to the phosphoryl transfer rate of ∼850s−1 between EIN and HPr. The conformational dynamics in HPr may be important for its phosphotransfer reactions with multiple partner proteins.Structured summary of protein interactionsEIN and HPr bind by nuclear magnetic resonance (View Interaction)

    The Prominentness of Fuzzy GE-Filters in GE-Algebras

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    Based on the concept of fuzzy points, the notion of a prominent fuzzy GE-filter is defined, and the various properties involved are investigated. The relationship between a fuzzy GE-filter and a prominent fuzzy GE-filter is discussed, and the characterization of a prominent fuzzy GE-filter is considered. The conditions under which a fuzzy GE-filter can be a prominent fuzzy GE-filter are explored, and conditions for the trivial fuzzy GE-filter to be a prominent fuzzy GE-filter are provided. The conditions under which the ∈t-set and Qt-set can be prominent GE-filters are explored. Finally, the extension property for the prominent fuzzy GE-filter is discussed
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