Estimating aboveground carbon density and its uncertainty in Borneo's structurally complex tropical forests using airborne laser scanning

Abstract. Borneo contains some of the world's most biodiverse and carbon-dense tropical forest, but this 750 000 km2 island has lost 62 % of its old-growth forests within the last 40 years. Efforts to protect and restore the remaining forests of Borneo hinge on recognizing the ecosystem services they provide, including their ability to store and sequester carbon. Airborne laser scanning (ALS) is a remote sensing technology that allows forest structural properties to be captured in great detail across vast geographic areas. In recent years ALS has been integrated into statewide assessments of forest carbon in Neotropical and African regions, but not yet in Asia. For this to happen new regional models need to be developed for estimating carbon stocks from ALS in tropical Asia, as the forests of this region are structurally and compositionally distinct from those found elsewhere in the tropics. By combining ALS imagery with data from 173 permanent forest plots spanning the lowland rainforests of Sabah on the island of Borneo, we develop a simple yet general model for estimating forest carbon stocks using ALS-derived canopy height and canopy cover as input metrics. An advanced feature of this new model is the propagation of uncertainty in both ALS- and ground-based data, allowing uncertainty in hectare-scale estimates of carbon stocks to be quantified robustly. We show that the model effectively captures variation in aboveground carbon stocks across extreme disturbance gradients spanning tall dipterocarp forests and heavily logged regions and clearly outperforms existing ALS-based models calibrated for the tropics, as well as currently available satellite-derived products. Our model provides a simple, generalized and effective approach for mapping forest carbon stocks in Borneo and underpins ongoing efforts to safeguard and facilitate the restoration of its unique tropical forests.This study was funded by the UK Natural Environment Research Council’s (NERC) Human Modified Tropical Forests research programme (grant numbers NE/K016377/1 and NE/K016407/1 awarded to the BALI and LOMBOK consortiums, respectively). We are grateful to NERC’s Airborne Research Facility and Data Analysis Node for conducting the survey and preprocessing the airborne data and to Abdullah Ghani for manning the GPS base station. David A. Coomes was supported in part by an International Academic Fellowship from the Leverhulme Trust. The Carnegie Airborne Observatory portion of the study was supported by the UN Development Programme, the Avatar Alliance Foundation, the Roundtable on Sustainable Palm Oil, the World Wildlife Fund and the Rainforest Trust. The Carnegie Airborne Observatory is made possible by grants and donations to Gregory P. Asner from the Avatar Alliance Foundation, the Margaret A. Cargill Foundation, the David and Lucile Packard Foundation, the Gordon and Betty Moore Foundation, the Grantham Foundation for the Protection of the Environment, the W. M. Keck Foundation, the John D. and Catherine T. MacArthur Foundation, the Andrew Mellon Foundation, Mary Anne Nyburg Baker and G. Leonard Baker Jr., and William R. Hearst III. The SAFE project was supported by the Sime Darby Foundation.pData\Local\Programs\Python\Python36-32\python.exe %USERPROFILE%\Documents\GitHub\OATs\oasis.py %USERPROFILE%\AppData\Local\Programs\Python\Python35-32\python.exe %USERPROFILE%\OATS\oasis.p

Pheromone-mediated mating disruption of the European grain moth Nemapogon granellus in ham factories

Nemapogon granellus is a lepidopteran species that can cause significant damage to stored animal products such as meats, sausages and cheeses. In the warehouses where such products are stored, pheromone-based control ap-proaches can avoid or reduce insecticide chemical treatments and be more effective than traditional control methods. This study aimed to evaluate the effectiveness of mating disruption (MD) techniques to control N. granellus populations in ham factories. Trials were conducted in two factories located in Northern Italy. In both locations two warehouses were selected: a warehouse test where dispensers, loaded with 10 mg of N. granellus pheromone, were deployed at a density ranging from 1 unit/22.5 m3 (factory A) to 1 unit/25 m3 (factory B), and a control warehouse left untreated. To assess the mating disruption efficacy, the reduction of the number of mated females in water traps, placed in control and treated warehouses, was used as main parameter. The results indicated a substantial reduction in mated females in the treated warehouses in comparison with control warehouses in both the sites of experiments. In detail, the total number of mated females sampled in water traps was above 90% in control warehouses, in warehouses treated with MD technique this percentage was below 50%. In addition, a "trap shutdown" effect was recorded in MD treated warehouses of both factories. These findings suggest that mating disruption is a promising technique that can be positively applied in the integrated pest management of N. granellus in ham factories

Between hope and disillusionment: ECMO seen through the lens of nurses working in a neonatal and paediatric intensive care unit

BACKGROUND: Using extracorporeal membrane oxygenation (ECMO) in paediatric and neonatal intensive care units (PICU/NICU) creates ethical challenges and carries a high risk for moral distress, burn out and team conflicts. AIM: The study aimed to gain a more comprehensive understanding of the underlying factors affecting moral distress when using ECMO for infants and children by examining the attitudes of ECMO nurses. METHODS: Four focus groups discussions were conducted with 21 critical care nurses working in a Swiss University Children's Hospital. Purposive sampling was adopted to identify research participants. The data were analysed using reflexive thematic analysis. RESULTS: Unlike "miracle machine" stories in online media reports, specialized nurses working in PICU/NICU expressed both their hopes and fears towards this technology. Their accounts also contained references to events and factors that triggered experiences of moral distress: the unspeakable nature of the death of a child or infant; the seemingly lack of honest and transparent communication with parents; the apparent loss of situational awareness among doctors; the perceived lack of recognition for the role of nurses and the variability in end-of-life decision-making; the length of time it takes doctors to take important treatment decisions; and the resource intensity of an ECMO treatment. CONCLUSION: The creation of a multidisciplinary moral community with transparent information among all involved health care professionals and the definition of clear treatment goals as well as the implementation of paediatric palliative care for all paediatric ECMO patients should become a priority if we want to alleviate situations of moral distress. RELEVANCE FOR CLINICAL PRACTICE: The creation of a multidisciplinary moral community, clear treatment goals and the implementation of palliative care for all paediatric ECMO patients are crucial to alleviate situations of moral distress for nurses, and thus to improve provider well-being and the quality of patient care in PICU/NICU

Isca, v1.0: a framework for the global modelling of the atmospheres of Earth and other planets at varying levels of complexity

This is the final version of the article. Available from EGU via the DOI in this record.The accepted author manuscript, published in Geoscientific Model Development Discussions, is in ORE: http://hdl.handle.net/10871/31579Isca is a framework for the idealized modelling of the global circulation of planetary atmospheres at varying levels of complexity and realism. The framework is an outgrowth of models from the Geophysical Fluid Dynamics Laboratory in Princeton, USA, designed for Earth's atmosphere, but it may readily be extended into other planetary regimes. Various forcing and radiation options are available, from dry, time invariant, Newtonian thermal relaxation to moist dynamics with radiative transfer. Options are available in the dry thermal relaxation scheme to account for the effects of obliquity and eccentricity (and so seasonality), different atmospheric optical depths and a surface mixed layer. An idealized grey radiation scheme, a two-band scheme, and a multiband scheme are also available, all with simple moist effects and astronomically based solar forcing. At the complex end of the spectrum the framework provides a direct connection to comprehensive atmospheric general circulation models. For Earth modelling, options include an aquaplanet and configurable continental outlines and topography. Continents may be defined by changing albedo, heat capacity, and evaporative parameters and/or by using a simple bucket hydrology model. Oceanic Q fluxes may be added to reproduce specified sea surface temperatures, with arbitrary continental distributions. Planetary atmospheres may be configured by changing planetary size and mass, solar forcing, atmospheric mass, radiation, and other parameters. Examples are given of various Earth configurations as well as a giant planet simulation, a slowly rotating terrestrial planet simulation, and tidally locked and other orbitally resonant exoplanet simulations. The underlying model is written in Fortran and may largely be configured with Python scripts. Python scripts are also used to run the model on different architectures, to archive the output, and for diagnostics, graphics, and post-processing. All of these features are publicly available in a Git-based repository.This work was funded by the Leverhulme Trust, NERC (grant NE/M006123/1), the Royal Society (Wolfson Foundation), EPSRC, the Newton Fund (CSSP project), and the Marie Curie Foundation

Isca, v1.0: a framework for the global modelling of the atmospheres of Earth and other planets at varying levels of complexity

This is the final version of the article. Available from EGU via the DOI in this record.The accepted author manuscript, published in Geoscientific Model Development Discussions, is in ORE: http://hdl.handle.net/10871/31579Isca is a framework for the idealized modelling of the global circulation of planetary atmospheres at varying levels of complexity and realism. The framework is an outgrowth of models from the Geophysical Fluid Dynamics Laboratory in Princeton, USA, designed for Earth's atmosphere, but it may readily be extended into other planetary regimes. Various forcing and radiation options are available, from dry, time invariant, Newtonian thermal relaxation to moist dynamics with radiative transfer. Options are available in the dry thermal relaxation scheme to account for the effects of obliquity and eccentricity (and so seasonality), different atmospheric optical depths and a surface mixed layer. An idealized grey radiation scheme, a two-band scheme, and a multiband scheme are also available, all with simple moist effects and astronomically based solar forcing. At the complex end of the spectrum the framework provides a direct connection to comprehensive atmospheric general circulation models. For Earth modelling, options include an aquaplanet and configurable continental outlines and topography. Continents may be defined by changing albedo, heat capacity, and evaporative parameters and/or by using a simple bucket hydrology model. Oceanic Q fluxes may be added to reproduce specified sea surface temperatures, with arbitrary continental distributions. Planetary atmospheres may be configured by changing planetary size and mass, solar forcing, atmospheric mass, radiation, and other parameters. Examples are given of various Earth configurations as well as a giant planet simulation, a slowly rotating terrestrial planet simulation, and tidally locked and other orbitally resonant exoplanet simulations. The underlying model is written in Fortran and may largely be configured with Python scripts. Python scripts are also used to run the model on different architectures, to archive the output, and for diagnostics, graphics, and post-processing. All of these features are publicly available in a Git-based repository.This work was funded by the Leverhulme Trust, NERC (grant NE/M006123/1), the Royal Society (Wolfson Foundation), EPSRC, the Newton Fund (CSSP project), and the Marie Curie Foundation

Characterization of the bacterial community associated with larvae and adults of anoplophora chinensis collected in Italy by culture and culture-independent methods

The wood-boring beetle Anoplophora chinensis Forster, native to China, has recently spread to North America and Europe causing serious damage to ornamental and forest trees. The gut microbial community associated with these xylophagous beetles is of interest for potential biotechnological applications in lignocellulose degradation and development of pest-control measures. In this study the gut bacterial community of larvae and adults of A. chinensis, collected from different host trees in North Italy, was investigated by both culture and culture-independent methods. Larvae and adults harboured a moderately diverse bacterial community, dominated by Proteobacteria, Actinobacteria, and Firmicutes. The gammaproteobacterial family Enterobacteriaceae (genera Gibbsiella, Enterobacter, Raoultella, and Klebsiella) was the best represented. The abundance of such bacteria in the insect gut is likely due to the various metabolic abilities of Enterobacteriaceae, including fermentation of carbohydrates derived from lignocellulose degradation and contribution to nitrogen intake by nitrogen-fixing activity. In addition, bacteria previously shown to have some lignocellulose-degrading activity were detected at a relatively low level in the gut. These bacteria possibly act synergistically with endogenous and fungal enzymes in lignocellulose breakdown. The detection of actinobacterial symbionts could be explained by a possible role in the detoxification of secondary plant metabolites and/or protection against pathogens. \ua9 2013 Aurora Rizzi et al

Forest disturbance and growth processes are reflected in the geographical distribution of large canopy gaps across the Brazilian Amazon

Canopy gaps are openings in the forest canopy resulting from branch fall and tree mortality events. The geographical distribution of large canopy gaps may reflect underlying variation in mortality and growth processes. However, a lack of data at the appropriate scale has limited our ability to study this relationship until now. We detected canopy gaps using a unique LiDAR dataset consisting of 650 transects randomly distributed across 2500 km(2) of the Brazilian Amazon. We characterized the size distribution of canopy gaps using a power law and we explore the variation in the exponent, alpha. We evaluated how the alpha varies across the Amazon, in response to disturbance by humans and natural environmental processes that influence tree mortality rates. We observed that South-eastern forests contained a higher proportion of large gaps than North-western, which is consistent with recent work showing greater tree mortality rates in the Southeast than the Northwest. Regions characterized by strong wind gust speeds, frequent lightning and greater water shortage also had a high proportion of large gaps, indicating that geographical variation in alpha is a reflection of underlying disturbance processes. Forests on fertile soils were also found to contain a high proportion of large gaps, in part because trees grow tall on these sites and create large gaps when they fall; thus, canopy gap analysis picked up differences in growth as well as mortality processes. Finally, we found that human-modified forests had a higher proportion of large gaps than intact forests, as we would expect given that these forests have been disturbed. Synthesis. The proportion of large gaps in the forest canopy varied substantially over the Brazilian Amazon. We have shown that the trends can be explained by geographical variation in disturbance and growth. The frequency of extreme weather events is predicted to increase under climate change, and changes could lead to greater forest disturbance, which should be detectable as an increased proportion of large gaps in intact forests.Peer reviewe