Gamow shell-model calculations of drip-line oxygen isotopes

We employ the Gamow shell model (GSM) to describe low-lying states of the oxygen isotopes 24O and 25O. The many-body Schrodinger equation is solved starting from a two-body Hamiltonian defined by a renormalized low-momentum nucleon-nucleon (NN) interaction, and a spherical Berggren basis. The Berggren basis treats bound, resonant, and continuum states on an equal footing, and is therefore an appropriate representation of loosely bound and unbound nuclear states near threshold. We show that such a basis is necessary in order to obtain a detailed and correct description of the low-lying 1+ and 2+ excited states in 24O. On the other hand, we find that a correct description of binding energy systematics of the ground states is driven by proper treatment and inclusion of many-body correlation effects. This is supported by the fact that we get 25O unstable with respect to 24O in both oscillator and Berggren representations starting from a 22O core. Furthermore, we show that the structure of these loosely bound or unbound isotopes are strongly influenced by the 1S0 component of the NN interaction. This has important consequences for our understanding of nuclear stability.Comment: 5 pages, 3 figure

Time delay as a key to Apoptosis Induction in the p53 Network

A feedback mechanism that involves the proteins p53 and mdm2, induces cell death as a controled response to severe DNA damage. A minimal model for this mechanism demonstrates that the respone may be dynamic and connected with the time needed to translate the mdm2 protein. The response takes place if the dissociation constant k between p53 and mdm2 varies from its normal value. Although it is widely believed that it is an increase in k that triggers the response, we show that the experimental behaviour is better described by a decrease in the dissociation constant. The response is quite robust upon changes in the parameters of the system, as required by any control mechanism, except for few weak points, which could be connected with the onset of cancer

Low-density series expansions for directed percolation II: The square lattice with a wall

A new algorithm for the derivation of low-density expansions has been used to greatly extend the series for moments of the pair-connectedness on the directed square lattice near an impenetrable wall. Analysis of the series yields very accurate estimates for the critical point and exponents. In particular, the estimate for the exponent characterizing the average cluster length near the wall, $\tau_1=1.00014(2)$, appears to exclude the conjecture $\tau_1=1$. The critical point and the exponents $\nu_{\parallel}$ and $\nu_{\perp}$ have the same values as for the bulk problem.Comment: 8 pages, 1 figur

Osculating and neighbour-avoiding polygons on the square lattice

We study two simple modifications of self-avoiding polygons. Osculating polygons are a super-set in which we allow the perimeter of the polygon to touch at a vertex. Neighbour-avoiding polygons are only allowed to have nearest neighbour vertices provided these are joined by the associated edge and thus form a sub-set of self-avoiding polygons. We use the finite lattice method to count the number of osculating polygons and neighbour-avoiding polygons on the square lattice. We also calculate their radius of gyration and the first area-weighted moment. Analysis of the series confirms exact predictions for the critical exponents and the universality of various amplitude combinations. For both cases we have found exact solutions for the number of convex and almost-convex polygons.Comment: 14 pages, 5 figure

1/z-renormalization of the mean-field behavior of the dipole-coupled singlet-singlet system HoF_3

The two main characteristics of the holmium ions in HoF_3 are that their local electronic properties are dominated by two singlet states lying well below the remaining 4f-levels, and that the classical dipole-coupling is an order of magnitude larger than any other two-ion interactions between the Ho-moments. This combination makes the system particularly suitable for testing refinements of the mean-field theory. There are four Ho-ions per unit cell and the hyperfine coupled electronic and nuclear moments on the Ho-ions order in a ferrimagnetic structure at T_C=0.53 K. The corrections to the mean-field behavior of holmium triflouride, both in the paramagnetic and ferrimagnetic phase, have been calculated to first order in the high-density 1/z-expansion. The effective medium theory, which includes the effects of the single-site fluctuations, leads to a substantially improved description of the magnetic properties of HoF_3, in comparison with that based on the mean-field approximation.Comment: 26pp, plain-TeX, JJ

Oscillations and temporal signalling in cells

The development of new techniques to quantitatively measure gene expression in cells has shed light on a number of systems that display oscillations in protein concentration. Here we review the different mechanisms which can produce oscillations in gene expression or protein concentration, using a framework of simple mathematical models. We focus on three eukaryotic genetic regulatory networks which show "ultradian" oscillations, with time period of the order of hours, and involve, respectively, proteins important for development (Hes1), apoptosis (p53) and immune response (NFkB). We argue that underlying all three is a common design consisting of a negative feedback loop with time delay which is responsible for the oscillatory behaviour

A stochastic theory for temporal fluctuations in self-organized critical systems

A stochastic theory for the toppling activity in sandpile models is developed, based on a simple mean-field assumption about the toppling process. The theory describes the process as an anti-persistent Gaussian walk, where the diffusion coefficient is proportional to the activity. It is formulated as a generalization of the It\^{o} stochastic differential equation with an anti-persistent fractional Gaussian noise source. An essential element of the theory is re-scaling to obtain a proper thermodynamic limit, and it captures all temporal features of the toppling process obtained by numerical simulation of the Bak-Tang-Wiesenfeld sandpile in this limit.Comment: 9 pages, 4 figure

Heating of Micro-protrusions in Accelerating Structures

The thermal and field emission of electrons from protrusions on metal surfaces is a possible limiting factor on the performance and operation of high-gradient room temperature accelerator structures. We present here the results of extensive numerical simulations of electrical and thermal behavior of protrusions. We unify the thermal and field emission in the same numerical framework, describe bounds for the emission current and geometric enhancement, then we calculate the Nottingham and Joule heating terms and solve the heat equation to characterize the thermal evolution of emitters under RF electric field. Our findings suggest that, heating is entirely due to the Nottingham effect, that thermal runaway scenarios are not likely, and that high RF frequency causes smaller swings in temperature and cooler tips. We build a phenomenological model to account for the effect of space charge and show that space charge eliminates the possibility of tip melting, although near melting temperatures reached.Comment: 8 pages, 10 figure

Perimeter Generating Functions For The Mean-Squared Radius Of Gyration Of Convex Polygons

We have derived long series expansions for the perimeter generating functions of the radius of gyration of various polygons with a convexity constraint. Using the series we numerically find simple (algebraic) exact solutions for the generating functions. In all cases the size exponent $\nu=1$.Comment: 8 pages, 1 figur

Guidelines for modelling reactive systems with coloured Petri nets

This paper focus on the modelling of reactive systems, more particularly, control systems. A set of guidelines is proposed in order to build models that support analysis, simulation and prototyping. The guidelines are split in two parts; the analysis of a problem is addressed first, followed by the design with Coloured Petri Nets (CPNs). A smart library example is used as case study. The models developed under this approach turn out to be modular, parameterisable, configurable and executable.FC