14 research outputs found
S4S8-RPA phosphorylation as an indicator of cancer progression in oral squamous cell carcinomas.
- Author
- Publication venue
- DigitalCommons@UNMC
- Publication date
- 16/12/2016
- Field of study
Oral cancers are easily accessible compared to many other cancers. Nevertheless, oral cancer is often diagnosed late, resulting in a poor prognosis. Most oral cancers are squamous cell carcinomas that predominantly develop from cell hyperplasias and dysplasias. DNA damage is induced in these tissues directly or indirectly in response to oncogene-induced deregulation of cellular proliferation. Consequently, a DNA Damage response (DDR) and a cell cycle checkpoint is activated. As dysplasia transitions to cancer, proteins involved in DNA damage and checkpoint signaling are mutated or silenced decreasing cell death while increasing genomic instability and allowing continued tumor progression. Hyperphosphorylation of Replication Protein A (RPA), including phosphorylation of Ser4 and Ser8 of RPA2, is a well-known indicator of DNA damage and checkpoint activation. In this study, we utilize S4S8-RPA phosphorylation as a marker for cancer development and progression in oral squamous cell carcinomas (OSCC). S4S8-RPA phosphorylation was observed to be low in normal cells, high in dysplasias, moderate in early grade tumors, and low in late stage tumors, essentially supporting the model of the DDR as an early barrier to tumorigenesis in certain types of cancers. In contrast, overall RPA expression was not correlative to DDR activation or tumor progression. Utilizing S4S8-RPA phosphorylation to indicate competent DDR activation in the future may have clinical significance in OSCC treatment decisions, by predicting the susceptibility of cancer cells to first-line platinum-based therapies for locally advanced, metastatic and recurrent OSCC
Ultralight vector dark matter search using data from the KAGRA O3GK run
- Author
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- Abbott R.
- Abe H.
- Abouelfettouh I.
- Acernese F.
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- Yokozawa T.
- Yoo Jooheon
- Yu Hang
- Yuzurihara Hirotaka
- ZadroĆŒny A.
- Zahoor Jan Aasim
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- Zeoli M.
- Zerrad M.
- Zevin Michael
- Zhang A. C.
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- Zhang Ya
- Zhao C.
- Zhao Yue
- Zhao Yuhang
- Zheng Yanyan
- Zhong Haowen
- Zhong S.
- Zhou R.
- Zhu Zong-Hong
- Zucker M. E.
- Zweizig John
- ĂrpĂĄd Gergely LĂĄszlĂł
- ć ćæŹœ
- æčćšéź
- éœäžž éèĄ
- Publication venue
- Publication date
- 01/03/2024
- Field of study
Among the various candidates for dark matter (DM), ultralight vector DM can be probed by laser interferometric gravitational wave detectors through the measurement of oscillating length changes in the arm cavities. In this context, KAGRA has a unique feature due to differing compositions of its mirrors, enhancing the signal of vector DM in the length change in the auxiliary channels. Here we present the result of a search for U(1)BâL gauge boson DM using the KAGRA data from auxiliary length channels during the first joint observation run together with GEO600. By applying our search pipeline, which takes into account the stochastic nature of ultralight DM, upper bounds on the coupling strength between the U(1)BâL gauge boson and ordinary matter are obtained for a range of DM masses. While our constraints are less stringent than those derived from previous experiments, this study demonstrates the applicability of our method to the lower-mass vector DM search, which is made difficult in this measurement by the short observation time compared to the auto-correlation time scale of DM
Observation of gravitational waves from the coalescence of a 2.5â4.5 Mâ compact object and a neutron star
- Author
- Abac Adrian
- Abbott R.
- Abouelfettouh I.
- Acernese F.
- Ackley Kendall
- Adhicary S.
- Adhikari Naresh
- Adhikari Rana X.
- Adkins V. K.
- Afif Ismail M.
- Agarwal Deepali
- Agathos Michalis
- Aghaei Abchouyeh Maryam
- Aguiar Odylio D.
- Aguilar I.
- Aiello Lorenzo
- Ain Anirban
- Ajith Parameswaran
- Akcay Sarp
- Akseli Hannuksela Otto
- Akutsu Tomotada
- Al-Jodah Ammar
- Al-Shammari S.
- Albanesi Simone
- Alex iandolo Guido
- Alfaidi Reem Atallah E
- Allocca Annalisa
- Alléné C.
- Altin Paul
- Alvarez-Lopez Sofia
- Amato Alex
- Amez-Droz L.
- Amorosi A.
- Amra C.
- Ananyeva A.
- Anderson Stuart
- Anderson Warren G.
- Andia Manuel
- Ando M.
- Andrade T.
- Andrea Prodi Giovanni
- Andres Nicolas
- Andric Tomislav
- Andrés Vallejo Peña Sergio
- Andrés-Carcasona Marc
- Anglin J.
- Anne Bizouard Marie
- Ansoldi Stefano
- Antelis Javier M.
- Antier Sarah
- Antoni Ramis Vidal Felip
- Antonietta Palaia Maria
- Antonio Font Roda Jose
- Aoumi M.
- Appavuravther E. Z.
- Appert S.
- Apple S. K.
- Arai Koji
- Araya Akito
- Araya Melody
- Areeda Joseph
- Argianas L.
- Arif Shaikh Md
- Aritomi N.
- Armato Federico
- Arnaud Nicolas
- Arogeti Megan
- Aronson Scott
- Arun K. G.
- Ashton Gregory
- Aso Yoichi
- Assiduo M.
- Aston S. M.
- Astone Pia
- Attadio Francesca
- Aubin Florian
- AVALLONE Guerino
- Azrad D.
- Babak Stanislav
- Badaracco Francesca
- Badger C.
- Bae Sangwook
- Bagnasco Stefano
- Bagui E.
- Baier Jeremy
- Baiotti Luca
- Bajpai Rishabh
- Baka T.
- Ball M.
- Ballardin G.
- Ballmer S. W.
- Banagiri Sharan
- Banerjee Biswajit
- Bankar Deepak
- Baral Pratyusava
- Barayoga J. C.
- Barish B. C.
- Barker D.
- Barneo Pablo
- Barone Fabrizio
- Barr Bryan
- Barsotti Lisa
- Barsuglia Matteo
- Barta DĂĄniel
- Bartoletti A. M.
- Barton Mark Andrew
- Bartos I.
- Basak Soummyadip
- Basalaev Artem
- Bassiri Riccardo
- Basti Andrea
- Bates D. E.
- Bawaj Mateusz
- Baxi P.
- Bayley Joseph
- Baylor Amanda
- Baynard II. P. A.
- Bazzan M.
- Bedakihale V. M.
- Beirnaert Freija
- Bejger MichaĆ
- Belardinelli Daniele
- Bell Angus
- Benedetto V.
- Benoit William
- Bentley Joe
- Bera Sayantani
- Berbel Marina
- Bergamin Fabio
- Berger Beverly
- Bernuzzi Sebastiano
- Beroiz Martin
- Berry Christopher P. L.
- Bersanetti Diego
- Bertolini A.
- Betzwieser Joseph
- Beveridge Damon
- Bevins Nathaniel
- Bhandare R.
- Bhardwaj Uddipta
- Bhatt R.
- Bhattacharjee Dripta
- Bhaumik Shubhagata
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- Wu Chien-Ming
- Wu David S.
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- Wuchner E.
- Wysocki Daniel
- Xu Victoria
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- Yaala M. Ben
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- Yelikar A. B.
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- Yokoyama Jun'ichi
- Yokozawa T.
- Yoo Jooheon
- Yu Hang
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- Yuzurihara Hirotaka
- ZadroĆŒny A.
- Zanolin M.
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- Zendri J. -P.
- Zeoli M.
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- Zheng Yanyan
- Zhong Haowen
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- Zweizig John
- ĂrpĂĄd Gergely LĂĄszlĂł
- ć ćæŹœ
- éœäžž éèĄ
- Publication venue
- Publication date
- 23/04/2024
- Field of study
NBS1 Mediates ATR-Dependent RPA Hyperphosphorylation Following Replication-Fork Stall and Collapse
- Publication venue
- DigitalCommons@University of Nebraska - Lincoln
- Publication date
- 01/01/2007
- Field of study
Post-translational phosphorylation of proteins provides a mechanism for cells to switch on or off many diverse processes, including responses to replication stress. Replication-stress-induced phosphorylation enables the rapid activation of numerous proteins involved in DNA replication, DNA repair and cell cycle checkpoints, including replication protein A (RPA). Here, we report that hydroxyurea (HU)-induced RPA phosphorylation requires both NBS1 (NBN) and NBS1 phosphorylation. Transfection of both phosphospecific and nonphosphospecific anti-NBS1 antibodies blocked hyperphosphorylation of RPA in HeLa cells. Nijmegen breakage syndrome (NBS) cells stably transfected with an empty vector or with S343A-NBS1 or S278A/S343A phospho-mutants were unable to hyperphosphorylate RPA in DNA-damage-associated foci following HU treatment. The stable transfection of fully functional NBS1 in NBS cells restored RPA hyperphosphorylation. Retention of ATR on chromatin in both NBS cells and in NBS cells expressing S278A/S343A NBS1 mutants decreased after DNA damage, suggesting that ATR is the kinase responsible for RPA phosphorylation. The importance of RPA hyperphosphorylation is demonstrated by the ability of cells expressing a phospho-mutant form of RPA32 (RPA2) to suppress and delay HU-induced apoptosis. Our findings suggest that RPA hyperphosphorylation requires NBS1 and is important for the cellular response to DNA damage
Nitrated alpha-synuclein-activated microglial profiling for Parkinsonâs disease
- Author
- Publication venue
- DigitalCommons@University of Nebraska - Lincoln
- Publication date
- 01/01/2008
- Field of study
(PD). This can occur, in part, by modulation of glial function following activation by soluble or insoluble modified alphasynuclein (α-syn), a chief component of Lewy bodies that is released from affected dopaminergic neurons. α-Syn is nitrated during oxidative stress responses and in its aggregated form, induces inflammatory microglial functions. Elucidation of these microglial function changes in PD could lead to new insights into disease mechanisms. To this end, PD-associated inflammation was modeled by stimulation of microglia with aggregated and nitrated α-syn. These activated microglia were ameboid in morphology and elicited dopaminergic neurotoxicity. A profile of nitrated, aggregated α-syn-stimulated microglia was generated using combinations of genomic (microarrays) and proteomic (liquid chromatography- tandem mass spectrometry, differential gel electrophoresis, and protein array) assays. Genomic studies revealed a substantive role for nuclear factor-kappa B transcriptional activation. Qualitative changes in the microglial proteome showed robust increases in inflammatory, redox, enzyme, and cytoskeletal proteins supporting the genomic tests. Autopsy brain tissue acquired from substantia nigra and basal ganglia of PD patients demonstrated that parallel nuclear factor-kappa B-related inflammatory processes were, in part, active during human disease. Taken together, the transcriptome and proteome of nitrated α-syn activated microglia, shown herein, provide new potential insights into disease mechanisms
Identification of inhibitors for single-stranded DNA-binding proteins in eubacteria
- Author
- Publication venue
- 'Oxford University Press (OUP)'
- Publication date
- Field of study
Source memory for unrecognized items: Predictions from multivariate signal detection theory
- Author
- A. Hilford
- Benjamin A. Martin
- C. S. Dodson
- C. S. Dodson
- D. G. Payne
- D. G. Smith
- F. G. Ashby
- G. I. Cook
- I. J. Myung
- J. G. Snodgrass
- J. L. Hicks
- J. Qin
- Jason L. Hicks
- Jeffrey J. Starns
- L. T. DeCarlo
- M. Coltheart
- M. Glanzer
- M. Glanzer
- Noelle L. Brown
- R. Ratcliff
- R. Ratcliff
- R. Ratcliff
- S. D. Slotnick
- S. D. Slotnick
- T. D. Wickens
- T. Meiser
- U. J. Bayen
- W. H. Batchelder
- W. P. Banks
- Publication venue
- 'Springer Science and Business Media LLC'
- Publication date
- Field of study
A partial matching theory of the mirror effect in immediate probed recognition
- Author
- Bahar Farahmand
- D. J. Murray
- D. J. Murray
- D. J. Murray
- D. J. Murray
- D. J. Murray
- D. L. Hintzman
- David J. Murray
- G. Mandler
- H. KuÄera
- H. L. Roediger
- H. P. Bahrick
- I. Neath
- J. Brown
- J. G. Snodgrass
- J. Laming
- J. R. Vokey
- Jason Burhop
- K. V. Rao
- Kirsten Oinonen
- L. Postman
- M. Glanzer
- M. Glanzer
- M. Glanzer
- Nikil Chande
- P. B. Elliott
- P. D. McCormack
- R. H. Logie
- R. L. Greene
- R. M. Shiffrin
- S. E. Clark
- Stephen Centa
- T. Zandt Van
- Terry Thomas
- Treena Wilkie
- W. A. Wickelgren
- W. E. Hockley
- Publication venue
- 'Springer Science and Business Media LLC'
- Publication date
- Field of study
The effect of context variability on source memory
- Author
- A. P. Yonelinas
- A. Treisman
- B. L. Chalfonte
- G. E. Bodner
- G. I. Cook
- Gabriel I. Cook
- J. L. Hicks
- J. L. Hicks
- J. L. Hicks
- J. L. McClelland
- J. M. Gardiner
- J. M. Gardiner
- J. Qin
- Jason L. Hicks
- K. Murnane
- M. Glanzer
- M. K. Johnson
- M. K. Johnson
- M. K. Johnson
- M. L. Bink
- M. Steyvers
- M. W. Howard
- M. W. Howard
- R. E. Guttentag
- R. E. Guttentag
- R. L. Marsh
- R. L. Marsh
- Richard L. Marsh
- S. D. Slotnick
- S. Dennis
- S. Joordens
- T. J. Perfect
- T. K. Landauer
- T. Meiser
- W. J. Macken
- Publication venue
- 'Springer Science and Business Media LLC'
- Publication date
- Field of study
DNA-PK phosphorylation of RPA32 Ser4/Ser8 regulates replication stress checkpoint activation, fork restart, homologous recombination and mitotic catastrophe
- Author
- Allen
- Allen
- Amanda K. Ashley
- Anantha
- Anantha
- Arnaudeau
- Arnaudeau
- Bakkenist
- Barlow
- Block
- Bosco
- Brock Sishc
- Brown
- Budzowska
- Courtney Amerin
- Cruet-Hennequart
- De Haro
- Diana D. Dimitrova
- Doksani
- Falck
- Greg G. Oakley
- Hagelstrom
- Hastings
- Hurley
- Jac A. Nickoloff
- Jason G. Glanzer
- Jazayeri
- Jingyi Nie
- Kuhne
- Kyle Troksa
- Lee
- Liaw
- Lieber
- Limoli
- Liu
- Lundin
- Luo
- Mankouri
- Manthey
- Matsuoka
- Meena Shrivastav
- Morrison
- Moynahan
- Myers
- Nickoloff
- Oakley
- Oakley
- Olson
- Paulsen
- Peng
- Phuong Le
- Romanova
- Serrano
- Shao
- Shechter
- Shechter
- Shen
- Shengqin Liu
- Shi
- Shrivastav
- Shrivastav
- Sonoda
- Stephen O. Opiyo
- Stiff
- Susan M. Bailey
- Syljuasen
- Vassin
- Wang
- Warmerdam
- Weinstock
- Wilson
- Wu
- Wu
- Xie
- Yajima
- Yoo
- Zernik-Kobak
- Zhou
- Publication venue
- 'Elsevier BV'
- Publication date
- Field of study