Paleogene dinoflagellate cysts and thermal maturity from Pabdeh Formation ( Zagros basin, west of Iran)

Palynological investigation on 132 samples from the 428m thick outcrop section of Late Paleocene to Early  Oligocene of the Pabdeh Formation in southwestern Iran yielded 55 species of dinoflagellate cysts and allowed  establishment of seven biozones. Quantity of marine palynomorph elements indicate an open marine  environment at that time interval but, a slight increase in number of spore and pollen grains in some samples  indicate suitable conditions for forest development as a consequence of increase in climate humidity. The  species are common in various latitudes and most of them are cosmopolitan. Thermal maturity index  measurement indicates oil prone nature for majority of the samples.Keyword: Pabdeh Formation, Dinoflagellate cysts, Paleogene, Palynostratigraphy, Thermal maturit

Numb “Adapting” Notch for Endocytosis

AbstractDuring sensory organ precursor divisions in Drosophila, the numb gene product segregates asymmetrically into one of the two daughter cells, to which it confers a specific fate by inhibiting Notch signaling. In this issue of Developmental Cell, Berdnik et al. show that Numb recruits α-Adaptin and that this physical interaction plays a role in downregulating Notch, presumably by stimulating endocytosis of Notch

Gene Clusters, Molecular Evolution and Disease: A Speculation

Traditionally eukaryotic genes are considered independently expressed under the control of their promoters and cis-regulatory domains. However, recent studies in worms, flies, mice and humans have shown that genes co-habiting a chromatin domain or “genomic neighborhood” are frequently co-expressed. Often these co-expressed genes neither constitute part of an operon nor function within the same biological pathway. The mechanisms underlying the partitioning of the genome into transcriptional genomic neighborhoods are poorly defined. However, cross-species analyses find that the linkage among the co-expressed genes of these clusters is significantly conserved and that the expression patterns of genes within clusters have coevolved with the clusters. Such selection could be mediated by chromatin interactions with the nuclear matrix and long-range remodeling of chromatin structure. In the context of human disease, we propose that dysregulation of gene expression across genomic neighborhoods will cause highly pleiotropic diseases. Candidate genomic neighborhood diseases include the nuclear laminopathies, chromosomal translocations and genomic instability disorders, imprinting disorders of errant insulator function, syndromes from impaired cohesin complex assembly, as well as diseases of global covalent histone modifications and DNA methylation. The alteration of transcriptional genomic neighborhoods provides an exciting and novel model for studying epigenetic alterations as quantitative traits in complex common human diseases

Fringe proteins modulate Notch-ligand cis and trans interactions to specify signaling states

The Notch signaling pathway consists of multiple types of receptors and ligands, whose interactions can be tuned by Fringe glycosyltransferases. A major challenge is to determine how these components control the specificity and directionality of Notch signaling in developmental contexts. Here, we analyzed same-cell (cis) Notch-ligand interactions for Notch1, Dll1, and Jag1, and their dependence on Fringe protein expression in mammalian cells. We found that Dll1 and Jag1 can cis-inhibit Notch1, and Fringe proteins modulate these interactions in a way that parallels their effects on trans interactions. Fringe similarly modulated Notch-ligand cis interactions during Drosophila development. Based on these and previously identified interactions, we show how the design of the Notch signaling pathway leads to a restricted repertoire of signaling states that promote heterotypic signaling between distinct cell types, providing insight into the design principles of the Notch signaling system, and the specific developmental process of Drosophila dorsal-ventral boundary formation

A Low Cost Image Steganalysis by Using Domain Adaptation

Information hiding and data encryption are used widely to protect data and information from anonymous access. In digital world, hiding and encrypting of the desired data into an image is a smart way to protect information with a low cost. In the digital images, steganalysis is a known method to distinguish between clean and stego images. Most of recent researches in this scope exploit feature reduction algorithms to improve the performance of correct detections. However, dimension reduction alone could not tackle the problem of steganalysis because the properties of stego images change during the steganalysis process. In this work, it is intended to propose an Image Steganalysis using visual Domain Adaptation (ISDA), which this steganalysis target images to distinguish across stego and clean images. ISDA is a dimensionality reduction approach that considers the image drifts during the steganography process in the steganalysis of target images. Moreover, ISDA employs domain invariant clustering in an embedded representation to cluster clean and stego images in the reduced subspace. The results on benchmark datasets demonstrate that ISDA thoroughly outperforms all of the state of the art methods on validation parameters, accuracy of detection and time complexit

A STUDY OF RELATIONSHIP BETWEEN MEASURE OF ILLIQUIDITY AND STOCK RETURNS IN TEHRAN STOCK AMIHUD EXCHANGE

Abstract The main objective of this study is examining the relationship between measure of Amihud illiquidity and stock returns in Tehran Stock Exchange (Iran). The basis of this measure is that if the stock price changes in reaction to a small volume of stock trading be significantly, Stocks will have lower liquidity (it means that measures of Amihud Illiquidity for it is high). Amihud illiquidity measure calculates stock market price reaction to order flows. In fact, this study seeks to answer the question that could Amihud illiquidity measure plays a significant role in stock returns of companies or not? For this purpose were collected the data of the 30 companies listed in Tehran Stock Exchange for the period 2006 to 2012 monthly. Research results show that there isn't significant relationship between returns and Amihud illiquidity measure

The Protein O-glucosyltransferase Rumi Modifies Eyes Shut to Promote Rhabdomere Separation in Drosophila

The protein O-glucosyltransferase Rumi/POGLUT1 regulates Drosophila Notch signaling by adding O-glucose residues to the Notch extracellular domain. Rumi has other predicted targets including Crumbs (Crb) and Eyes shut (Eys), both of which are involved in photoreceptor development. However, whether Rumi is required for the function of Crb and Eys remains unknown. Here we report that in the absence of Rumi or its enzymatic activity, several rhabdomeres in each ommatidium fail to separate from one another in a Notch-independent manner. Mass spectral analysis indicates the presence of O-glucose on Crb and Eys. However, mutating all O-glucosylation sites in a crb knock-in allele does not cause rhabdomere attachment, ruling out Crb as a biologically-relevant Rumi target in this process. In contrast, eys and rumi exhibit a dosage-sensitive genetic interaction. In addition, although in wild-type ommatidia most of the Eys protein is found in the inter-rhabdomeral space (IRS), in rumi mutants a significant fraction of Eys remains in the photoreceptor cells. The intracellular accumulation of Eys and the IRS defect worsen in rumi mutants raised at a higher temperature, and are accompanied by a ∼50% decrease in the total level of Eys. Moreover, removing one copy of an endoplasmic reticulum chaperone enhances the rhabdomere attachment in rumi mutant animals. Altogether, our data suggest that O-glucosylation of Eys by Rumi ensures rhabdomere separation by promoting proper Eys folding and stability in a critical time window during the mid-pupal stage. Human EYS, which is mutated in patients with autosomal recessive retinitis pigmentosa, also harbors multiple Rumi target sites. Therefore, the role of O-glucose in regulating Eys may be conserved

Specificity of Atonal and Scute bHLH factors: analysis of cognate E box binding sites and the influence of Senseless

The question of how proneural bHLH transcription factors recognise and regulate their target genes is still relatively poorly understood. We previously showed that Scute and Atonal target genes have different E box motifs, suggesting that specific DNA interactions contribute to differences in their target gene specificity. Here we show that Scute and Atonal proteins (in combination with Daughterless) can activate reporter gene expression via their cognate E boxes in a non-neuronal cell culture system, suggesting that the proteins have strong intrinsic abilities to recognise different E box motifs in the absence of specialised cofactors. Functional comparison of E boxes from several target genes and site-directed mutagenesis of E box motifs suggests that specificity and activity require further sequence elements flanking both sides of the previously identified E box motifs. Moreover, the proneural cofactor, Senseless, can augment the function of Scute and Atonal on their cognate E boxes and therefore may contribute to proneural specificity

A Novel Two-Channel Continuous-Time Time-Interleaved 3rd-order Sigma- Delta Modulator with Integrator-Sharing Topology

this paper presents a 3rd-order two-path Continuous-Time Time-Interleaved (CTTI) delta-sigma modulator which is implemented in standard 90nm CMOS technology. The architecture uses a novel method to resolve the delayless feedback path issue arising from the sharing of integrators between paths. By exploiting the concept of the time-interleaving techniques and through the use time domain equations, a conventional single path 3rd-order Discrete-Time (DT) ΔΣ modulator is converted into a corresponding two-path Discrete-Time Time-Interleaved (DTTI) counterpart. The equivalent Continuous-Time Time-Interleaved version derived from the DTTI ΔΣ modulator by determining the DT loop filters and converting them to the equivalent Continuous-Time (CT) loop filters through the use of the Impulse Invariant Transformation. Sharing the integrators between two paths of the reported modulator makes it robust to path mismatch effects compared to the typical Time-Interleaved (TI) modulators which have individual integrators in all paths. The modulator achieves a dynamic range of 12 bits with an OverSampling Ratio (OSR) of 16 over a bandwidth of 10MHz and dissipates only 28mW of power from a 1.8-V supply. The clock frequency of the modulator is 320MHz but integrators, quantizers and DACs operate at 160MHz