Reproducible and relocatable regional ocean modelling: fundamentals and practices

In response to an increasing demand for bespoke or tailored regional ocean modelling configurations, we outline fundamental principles and practices that can expedite the process to generate new configurations. The paper develops the principle of reproducibility and advocates adherence by presenting benefits to the community and user. The elements of this principle are reproducible workflows and standardised assessment, with additional effort over existing working practices being balanced against the added value generated. The paper then decomposes the complex build process, for a new regional ocean configuration, into stages and presents guidance, advice and insight for each component. This advice is compiled from across the NEMO (Nucleus for European Modelling of the Ocean) user community and sets out principles and practises that encompass regional ocean modelling with any model. With detailed and region-specific worked examples in Sects. 3 and 4, the linked companion repositories and DOIs all target NEMOv4. The aim of this review and perspective paper is to broaden the user community skill base and to accelerate development of new configurations in order to increase the time available for exploiting the configurations

Turbulence structure in the upper ocean: a comparative study of observations and modeling

Observations of turbulent dissipation rates measured by two independent instruments are compared with numerical model runs to investigate the injection of turbulence generated by sea surface gravity waves. The nearsurface observations are made by a moored autonomous instrument, fixed at approximately 8 m below the sea surface. The instrument is equipped with shear probes, a highresolution pressure sensor, and an inertial motion package to measure time series of dissipation rate and nondirectional surface wave energy spectrum. A free-falling profiler is used additionally to collect vertical microstructure profiles in the upper ocean. For the model simulations, we use a one-dimensional mixed layer model based on a k–ε type second moment turbulence closure, which is modified to include the effects of wave breaking and Langmuir cells. The dissipation rates obtained using the modified k–ε model are elevated near the sea surface and in the upper water column, consistent with the measurements, mainly as a result of wave breaking at the surface, and energy drawn from wave field to the mean flow by Stokes drift. The agreement between observed and simulated turbulent quantities is fairly good, especially when the Stokes production is taken into account