15 research outputs found

    3D zero-thickness coupled interface finite element:Formulation and application

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    In many fields of geotechnical engineering, the modelling of interfaces requires special numerical tools. This paper presents the formulation of a 3D fully coupled hydro-mechanical finite element of interface. The element belongs to the zero-thickness family and the contact constraint is enforced by the penalty method. Fluid flow is discretised through a three-node scheme, discretising the inner flow by additional nodes. The element is able to reproduce the contact/loss of contact between two solids as well as shearing/sliding of the interface. Fluid flow through and across the interface can be modelled. Opening of a gap within the interface influences the longitudinal transmissivity as well as the storage of water inside the interface. Moreover the computation of an effective pressure within the interface, according to the Terzaghi’s principle creates an additional hydro-mechanical coupling. The uplifting simulation of a suction caisson embedded in a soil layer illustrates the main features of the element. Friction is progressively mobilised along the shaft of the caisson and sliding finally takes place. A gap is created below the top of the caisson and filled with water. It illustrates the storage capacity within the interface and the transversal flow. Longitudinal fluid flow is highlighted between the shaft of the caisson and the soil. The fluid flow depends on the opening of the gap and is related to the cubic law

    Integrating sequence and array data to create an improved 1000 Genomes Project haplotype reference panel

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    A major use of the 1000 Genomes Project (1000GP) data is genotype imputation in genome-wide association studies (GWAS). Here we develop a method to estimate haplotypes from low-coverage sequencing data that can take advantage of single-nucleotide polymorphism (SNP) microarray genotypes on the same samples. First the SNP array data are phased to build a backbone (or 'scaffold') of haplotypes across each chromosome. We then phase the sequence data 'onto' this haplotype scaffold. This approach can take advantage of relatedness between sequenced and non-sequenced samples to improve accuracy. We use this method to create a new 1000GP haplotype reference set for use by the human genetic community. Using a set of validation genotypes at SNP and bi-allelic indels we show that these haplotypes have lower genotype discordance and improved imputation performance into downstream GWAS samples, especially at low-frequency variants. © 2014 Macmillan Publishers Limited. All rights reserved

    Comparison of the radiological impacts of thorium and uranium nuclear fuel cycles

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    This report compares the radiological impacts of a fuel cycle in which only uranium is recycled, as presented in the Final Generic Environmental Statement on the Use of Recycle Plutonium in Mixed Oxide Fuel in Light Water Cooled Reactors (GESMO), with those of the light-water breeder reactor (LWBR) thorium/uranium fuel cycle in the Final Environmental Statement, Light Water Breeder Reactor Program. The significant offsite radiological impacts from routine operation of the fuel cycles result from the mining and milling of thorium and uranium ores, reprocessing spent fuel, and reactor operations. The major difference between the impacts from the two fuel cycles is the larger dose commitments associated with current uranium mining and milling operations as compared to thorium mining and milling. Estimated dose commitments from the reprocessing of either fuel type are small and show only moderate variations for specific doses. No significant differences in environmental radiological impact are anticipated for reactors using either of the fuel cycles. Radiological impacts associated with routine releases from the operation of either the thorium or uranium fuel cycles can be held to acceptably low levels by existing regulations
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