2,302 research outputs found

    Staphylococcus aureus DivIB is a peptidoglycan-binding protein that is required for a morphological checkpoint in cell division

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    Bacterial cell division is a fundamental process that requires the coordinated actions of a number of proteins which form a complex macromolecular machine known as the divisome. The membrane-spanning proteins DivIB and its orthologue FtsQ are crucial divisome components in Gram-positive and Gram-negative bacteria respectively. However, the role of almost all of the integral division proteins, including DivIB, still remains largely unknown. Here we show that the extracellular domain of DivIB is able to bind peptidoglycan and have mapped the binding to its β subdomain. Conditional mutational studies show that divIB is essential for Staphylococcus aureus growth, while phenotypic analyses following depletion of DivIB results in a block in the completion, but not initiation, of septum formation. Localisation studies suggest that DivIB only transiently localises to the division site and may mark previous sites of septation. We propose that DivIB is required for a molecular checkpoint during division to ensure the correct assembly of the divisome at midcell and to prevent hydrolytic growth of the cell in the absence of a completed septum

    The off-Shell Electromagnetic Vertex of the Nucleon in Chiral Perturbation Theory

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    We study the electromagnetic vertex of a nucleon in next-to-leading order chiral perturbation theory (CPT). We consider the case where one of the nucleons at the γ\gammaNN vertex is off its mass shell. We define relevant measures for the off-shell dependence in the limited kinematical range allowed, and analyze their expansion in the pion mass. The leading nonanalytic contributions are calculated to estimate their size.Comment: 12 pages (LaTeX), 1 figure (available upon request), NIKHEF 93-P

    In Vivo Photoacoustic Imaging of Anterior Ocular Vasculature: A Random Sample Consensus Approach

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    Visualizing ocular vasculature is important in clinical ophthalmology because ocular circulation abnormalities are early signs of ocular diseases. Photoacoustic microscopy (PAM) images the ocular vasculature without using exogenous contrast agents, avoiding associated side effects. Moreover, 3D PAM images can be useful in understanding vessel-related eye disease. However, the complex structure of the multi-layered vessels still present challenges in evaluating ocular vasculature. In this study, we demonstrate a new method to evaluate blood circulation in the eye by combining in vivo PAM imaging and an ocular surface estimation method based on a machine learning algorithm: a random sample consensus algorithm. By using the developed estimation method, we were able to visualize the PA ocular vascular image intuitively and demonstrate layer-by-layer analysis of injured ocular vasculature. We believe that our method can provide more accurate evaluations of the eye circulation in ophthalmic applications. ? The Author(s) 2017.1110Ysciescopu

    FSEM: Functional Structural Equation Models for Twin Functional Data

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    The aim of this article is to develop a novel class of functional structural equation models (FSEMs) for dissecting functional genetic and environmental effects on twin functional data, while characterizing the varying association between functional data and covariates of interest. We propose a three-stage estimation procedure to estimate varying coefficient functions for various covariates (e.g., gender) as well as three covariance operators for the genetic and environmental effects. We develop an inference procedure based on weighted likelihood ratio statistics to test the genetic/environmental effect at either a fixed location or a compact region. We also systematically carry out the theoretical analysis of the estimated varying functions, the weighted likelihood ratio statistics, and the estimated covariance operators. We conduct extensive Monte Carlo simulations to examine the finite-sample performance of the estimation and inference procedures. We apply the proposed FSEM to quantify the degree of genetic and environmental effects on twin white matter tracts obtained from the UNC early brain development study. Supplementary materials for this article are available online

    Effects of reducing dietary crude protein and metabolic energy in weaned piglets

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    The objective of this experiment was to determine the effects of a pure reduction in the dietary crude protein (CP) and metabolic energy (ME) contents on growth performance, nutrient digestibility, blood profile, faecal microflora and odour gas emission in weaned pigs. A total of 80 weaned piglets ((Landrace × Yorkshire) × Duroc) with a mean initial bodyweight (BW) of 6.8 ± 0.5 kg were randomly allotted to four treatments with four replicate pens of five piglets per pen (based on average BW) for 45 days. The dietary treatments consisted of i) CON: basal diet; ii) LME: reduction of 10% of ME in basal diet; iii) LCP: reduction of 10% of CP in basal diet; iv) MECP: reduction of 10% of CP and 10% of ME in basal diet. During the experimental period, average daily feed intake (ADFI) improved in piglets fed the LME and LCP diets, compared with those fed the CON diets. Average daily gain (ADG) and gain to feed (G : F) ratio decreased in piglets fed LCP, LME, and MECP diet, when compared with those fed the CON diet. However, during the total experimental period, ADG and G : F ratio were not affected by dietary treatment. With regard to nutrient digestibility, apparent total track digestibility (ATTD) of CP was not affected by experimental diets. The concentration of blood urea nitrogen (BUN) in blood decreased more in piglets fed LME, LCP, and MECP than those fed the CON diet. The emissions of ammonia (NH3), hydrogen sufide (H2S), and volatile fatty acids (VFAs) were lower in piglets fed LME, LCP, and MECP diet than those fed the CON diet. In conclusion, these results indicate that reduction in dietary CP and ME content did not decrease growth performance and nutrient digestibility, and they increased positive effects such as BUN and gas emission reduction.Keywords: Blood profile, digestibility, growth performance, odour emission, pi

    Evaluation of fermented whole crop wheat and barley feeding on growth performance, nutrient digestibility, faecal volatile fatty acid emission, blood constituents, and faecal microbiota in growing pigs

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    This study was conducted to determine the effects of feeding diets with fermented whole crop wheat (FWW) and fermented whole crop barley (FWB) on growth performance, nutrient digestibility, blood constituents, faecal volatile fatty acid (VFA) emission and faecal microbiota in growing pigs. A total of 200 growing pigs were randomly allotted to five treatments with eight replicates per treatment and five pigs per replicate. Dietary treatments consisted of i) CON (basal diet), ii) 0.5% FWW (CON + 0.5% fermented whole crop wheat), iii) 1.0% FWW (CON + 1.0% fermented whole crop wheat), iv) 0.5% FWB (CON + 0.5% fermented whole crop barley), and v) 1.0% FWB (CON + 1.0% fermented whole crop barley). The digestibility of total dietary fibre was significantly higher in pigs fed FWW diets. The faecal emissions of VFA of pigs fed the fermented treatments was increased significantly compared with CON. Concentrations of cortisol and triglyceride in blood of pigs fed 1.0% FWW were significantly lower than pigs fed CON diets. The pigs fed 1.0% FWB diets had a significantly decreased level of total cholesterol in blood compared with CON. In conclusion, the current results indicated that diets supplemented with FWW and FWB could increase faecal VFA emission and reduce concentration of triglyceride and cortisol, while 0.5% and 1.0% FWW had no negative effects on growth performance, and could increase digestibility of dietary fibre in growing pigs.Keywords: Dietary fibre, faecal short-chain fatty acid emissions, fermented feed, serum parameter, swin

    Rapid analysis of pyrethroid insecticides in aquaculture seawater samples via membrane-assisted solvent extraction coupled with gas chromatography-electron capture detection

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    A simple, efficient, and environmentally friendly membrane-assisted solvent extraction (MASE) method for the extraction and preconcentration of six pyrethroid insecticides from aquaculture seawater samples followed by gas chromatography-electron capture detection (GC-ECD) was successfully proposed. The operating conditions for MASE, such as the extraction solvent, solvent volume, NaCl concentration, stirring rate, extraction time, and temperature, were optimized. Compared to conventional Florisil-solid phase extraction (SPE), higher extraction recoveries (85.9% to 105.9%) of three spiked levels of the six pyrethroid pesticides in aquaculture seawater were obtained using MASE, and the RSD values were lower than 7.9%. The limits of detection (LOD, signal-to-noise ratio (S/N)=3) and quantification (LOQ, S/N = 10) were in the range of 0.037–0.166 and 0.12–0.55 µg L-1, respectively. The results demonstrate the excellent applicability of the MASE method in analyzing the six pyrethroid pesticides in aqueous samples. The proposed method exhibited a high potential for routine monitoring analysis of pyrethroid insecticides in seawater samples

    A plasticity model for powder compaction processes incorporating particle deformation and rearrangement

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    This article is available open access through the publisher’s website at the link below. Copyright @ 2008 Elsevier Ltd.This paper develops a mechanistic model of granular materials that can be used with a commercial finite element package (ABAQUS). The model draws on the ideas of critical state soil mechanics and combines them with the theory of envelopes to develop an elasto-plastic model with a non-associated flow rule. The model incorporates both local deformation at the granule contacts, and rearrangement of the granules so that jointly they account for any bulk deformation. The mechanics of the model closely reflect the physicality of the material behaviour and the model parameters are closely linked (although not simplistically identical) to the characteristics of the granules. This not only gives an insight into the material behaviour, but also enables the model to be used to facilitate design of the material, its processing properties and, hence, component development. The model is used to simulate drained triaxial tests, settlement of a powder in a bin, and some examples of die pressing. Simulations are compared with experimental data and with predictions obtained using other models

    Influence of season of birth, sex and paternal line on growth performance and carcass traits in pigs

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    Participants in the pig production industry focus on feed and feed additives to improve growth performance and meat quality of pigs. Consequently, the Rural Development Administration of the Republic of Korea produced a new paternal line to improve economic traits in pigs. However, there is an absence of information on pig traits with regard to season and sex, and a comparison between the new paternal line and past paternal lines. Therefore, the authors conducted this study to investigate the influence of season of birth, sex and paternal line on growth performance and carcass traits in pigs. A total of 2888 piglets ((Landrace × Yorkshire) × Darby Duroc (DD) or Chookjin Duroc (CD)) with an average age of three weeks were tested for 22 weeks during the four season of the year (spring 608 piglets, summer 404 piglets, autumn 576 piglets and winter 1300 piglets). The bodyweights (BW) of individual pig were recorded, and feed consumption was recorded at weeks 2, 12 and 22, to determine growth performance. At reaching market weight, backfat thickness was determined at the last rib area. Meat was graded according to the criteria of the slaughterhouse. There were no significant differences in growth performance and carcass traits between sexes. The CD line crossbred pig had a significant higher BW at 16 weeks, and higher carcass trait values at 22 weeks than the DD line. During weeks 8 to 16 the CD line crossbred pigs showed a tendency of an increased average daily gain (ADG) and gain : feed (G : F) ratio compared with the DD line. Furthermore, pigs born in spring had significant lower ADG, average daily feed intake (ADFI) and carcass trait values than born in the other seasons. In conclusion, the new paternal line (Chookjin Duroc) improved growth performance and carcass traits compare with the DD line.Keywords: sex, growth, terminal sire, meat quality, backfat thicknes
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