Genetic transformation of the frog-killing chytrid fungus Batrachochytrium dendrobatidis

Batrachochytrium dendrobatidis (Bd), a causative agent of chytridiomycosis, is decimating amphibian populations around the world. Bd belongs to the chytrid lineage, a group of early-diverging fungi that are widely used to study fungal evolution. Like all chytrids, Bd develops from a motile form into a sessile, growth form, a transition that involves drastic changes in its cytoskeletal architecture. Efforts to study Bd cell biology, development, and pathogenicity have been limited by the lack of genetic tools with which to test hypotheses about underlying molecular mechanisms. Here, we report the development of a transient genetic transformation system for Bd. We used electroporation to deliver exogenous DNA into Bd cells and detected transgene expression for up to three generations under both heterologous and native promoters. We also adapted the transformation protocol for selection using an antibiotic resistance marker. Finally, we used this system to express fluorescent protein fusions and, as a proof of concept, expressed a genetically encoded probe for the actin cytoskeleton. Using live-cell imaging, we visualized the distribution and dynamics of polymerized actin at each stage of the Bd life cycle, as well as during key developmental transitions. This transformation system enables direct testing of key hypotheses regarding mechanisms of Bd pathogenesis. This technology also paves the way for answering fundamental questions of chytrid cell, developmental, and evolutionary biology

Fiber orientation in viscous fluid flow with and without vibration

This early-stage investigation is related to determination of flow speed gradients of fresh steel fiber-reinforced concrete (SFRC). They are assumed to be the key parameters for computer modeling of orientation of steel fibers in form casting process. The aim of the research is to elaborate a computer model for evaluation of steel fiber orientation in casting process, which would provide an attractive possibility to predict concrete mechanical properties, optimization of casting process and costs due to proper use of ingredients. Fiber orientation in FRC is important for ensuring the best mechanical properties in the places where it is necessary. Task can be solved as: to obtain optimal fiber concentration and orientation or to use appropriate casting approach of concrete with the goal to obtain required mechanical properties in appropriate locations of the composite element. As an example the paper considers the case of trench filling by fiber concrete. Simulations provided distributions of vertical and horizontal velocities in real-time scale. Behavior of a single fiber in an inclined container with a viscous transparent liquid (potato-starch solution) was analyzed in order to confirm the possibility to obtain orientation of fibers on the basis of velocity gradients in viscous fluid. For precise modeling of potato-starch liquid, coefficient of dynamic viscosity was determined. The experiments performed on fibers in an inclined container demonstrated satisfactory agreement with the simulation results. Performed analysis indicates that velocity gradients can be applied for determination of position and orientation of fibers in fabrication of fiber-reinforced concrete product

Surface modification of natural fibers using bacteria: Depositing bacterial cellulose onto natural fibers to create hierarchical fiber reinforced nanocomposites

Triggered biodegradable composites made entirely from renewable resources are urgently sought after to improve material recyclability or be able to divert materials from waste streams. Many biobased polymers and natural fibers usually display poor interfacial adhesion when combined in a composite material. Here we propose a way to modify the surfaces of natural fibers by utilizing bacteria (Acetobacter xylinum) to deposit nanosized bacterial cellulose around natural fibers, which enhances their adhesion to renewable polymers. This paper describes the process of modifying large quantities of natural fibers with bacterial cellulose through their use as substrates for bacteria during fermentation. The modified fibers were characterized by scanning electron microscopy, single fiber tensile tests, X-ray photoelectron spectroscopy, and inverse gas chromatography to determine their surface and mechanical properties. The practical adhesion between the modified fibers and the renewable polymers cellulose acetate butyrate and poly(L-lactic acid) was quantified using the single fiber pullout test

A neutron spectrometer for studying giant resonances with (p,n) reactions in inverse kinematics

A neutron spectrometer, the European Low-Energy Neutron Spectrometer (ELENS), has been constructed to study exotic nuclei in inverse-kinematics experiments. The spectrometer, which consists of plastic scintillator bars, can be operated in the neutron energy range of 100 keV-10 MeV. The neutron energy is determined using the time-of-flight technique, while the position of the neutron detection is deduced from the time-difference information from photomultipliers attached to both ends of each bar. A novel wrapping method has been developed for the plastic scintillators. The array has a larger than 25% detection efficiency for neutrons of approximately 500 keV in kinetic energy and an angular resolution of less than 1 degrees. Details of the design, construction and experimental tests of the spectrometer will be presented. (C) 2013 Elsevier B.V. All rights reserved.</p

The differences in RCAS1 and DFF45 endometrial expression between late proliferative, early secretory, and mid-secretory cycle phases.

RCAS1 expression is related to the regulation of activated immune cells and to connective tissue remodeling within the endometrium. DFF45 seems to play an important role in the apoptotic process, most likely by acting through the regulation of DNA fragmentation. Its expression changes within the endometrium seem to be related to the resistance of endometrial cells to apoptosis. The aim of the present study was to evaluate RCAS1 and DFF45 endometrial expressions during ovulation and the implantation period. RCAS1 and DFF45 expression was assessed by the Western-blot method in endometrial tissue samples obtained from 20 patients. The tissue samples were classified according to the menstrual cycle phases in which they were collected, with a division into three phases: late proliferative, early secretory, and mid-secretory. The lowest level of RCAS1 and the highest level of DFF45 endometrial expression was found during the early secretory cycle phase. Statistically significantly higher RCAS1 and statistically significantly lower DFF45 endometrial expression was identified in the endometrium during the late proliferative as compared to the early secretory cycle phase. Moreover, statistically significantly higher RCAS1 and statistically significantly lower DFF45 expression was found in the endometrium during the mid-secretory as compared to the early secretory cycle phase. The preparation for implantation process in the endometrium is preceded by dynamic changes in endometrial ECM and results from the proper interaction between endometrial and immune cells. The course of this process is conditioned by the immunomodulating activity of endometrial cells and their resistance to immune-mediated apoptosis. These dynamic changes are closely related to RCAS1 and DFF45 expression alterations

AVENS - A Novel Flying Ad Hoc Network Simulator with Automatic Code Generation for Unmanned Aircraft System

The wireless communication has played a significant impact on our daily lives introducing simplicity and making life more comfortable. \ As a result of faster technological advances in electronics and communications, the development of different types of unmanned aerial vehicles (UAVs) has become possible. \ Recently, many efforts have been made to develop more efficient inter- and intra-vehicle communication protocols introducing new challenges, e. g. multiple-UAV communication and Flying Ad Hoc Networks (FANETs). \ However, most of the experiments using real prototypes or systems are not feasible due to the costs and risks involved. \ Thus, simulating network protocol behavior in FANET scenarios is increasingly required to evaluate the applicability of developed network protocols. \ Thereby, we have been developing AVENS, a hybrid aerial network simulation framework, which merges LARISSA Architectural Model, X-Plane Flight Simulator and OMNeT++ Discrete Event Simulator. \ In a proof-of-concept study, we highlighted its advantages. \ Using AVENS, we can advance in the state-of-the-art concerning performance evaluation of intelligent aerial vehicles and provide means to evaluate the development of protocols, codes and systems more accurately

Property and Shape Modulation of Carbon Fibers Using Lasers

An exciting challenge is to create unduloid-reinforcing fibers with tailored dimensions to produce synthetic composites with improved toughness and increased ductility. Continuous carbon fibers, the state-of-the-art reinforcement for structural composites, were modified via controlled laser irradiation to result in expanded outwardly tapered regions, as well as fibers with Q-tip (cotton-bud) end shapes. A pulsed laser treatment was used to introduce damage at the single carbon fiber level, creating expanded regions at predetermined points along the lengths of continuous carbon fibers, while maintaining much of their stiffness. The range of produced shapes was quantified and correlated to single fiber tensile properties. Mapped Raman spectroscopy was used to elucidate the local compositional and structural changes. Irradiation conditions were adjusted to create a swollen weakened region, such that fiber failure occurred in the laser treated region producing two fiber ends with outwardly tapered ends. Loading the tapered fibers allows for viscoelastic energy dissipation during fiber pull-out by enhanced friction as the fibers plough through a matrix. In these tapered fibers, diameters were locally increased up to 53%, forming outward taper angles of up to 1.8°. The tensile strength and strain to failure of the modified fibers were significantly reduced, by 75% and 55%, respectively, ensuring localization of the break in the expanded region; however, the fiber stiffness was only reduced by 17%. Using harsher irradiation conditions, carbon fibers were completely cut, resulting in cotton-bud fiber end shapes. Single fiber pull-out tests performed using these fibers revealed a 6.75-fold increase in work of pull-out compared to pristine carbon fibers. Controlled laser irradiation is a route to modify the shape of continuous carbon fibers along their lengths, as well as to cut them into controlled lengths leaving tapered or cotton-bud shapes

Fiber orientation in viscous fluid flow with and without vibration

This early-stage investigation is related to determination of flow speed gradients of fresh steel fiber-reinforced concrete (SFRC). They are assumed to be the key parameters for computer modeling of orientation of steel fibers in form casting process. The aim of the research is to elaborate a computer model for evaluation of steel fiber orientation in casting process, which would provide an attractive possibility to predict concrete mechanical properties, optimization of casting process and costs due to proper use of ingredients. Fiber orientation in FRC is important for ensuring the best mechanical properties in the places where it is necessary. Task can be solved as: to obtain optimal fiber concentration and orientation or to use appropriate casting approach of concrete with the goal to obtain required mechanical properties in appropriate locations of the composite element. As an example the paper considers the case of trench filling by fiber concrete. Simulations provided distributions of vertical and horizontal velocities in real-time scale. Behavior of a single fiber in an inclined container with a viscous transparent liquid (potato-starch solution) was analyzed in order to confirm the possibility to obtain orientation of fibers on the basis of velocity gradients in viscous fluid. For precise modeling of potato-starch liquid, coefficient of dynamic viscosity was determined. The experiments performed on fibers in an inclined container demonstrated satisfactory agreement with the simulation results. Performed analysis indicates that velocity gradients can be applied for determination of position and orientation of fibers in fabrication of fiber-reinforced concrete product

Untangling the imprints of climate, geography and land use/cover on bird diversity in the South American Gran Chaco

To evaluate the structure of bird communities throughout the South American Gran Chaco determining the effects of climate, geography and land use/land cover in bird beta diversity, as well as to understand the beta diversity processes underlying land use changes across broad spatial ranges. Location: South American Gran Chaco. Taxon: Birds. Methods: We constructed a site-by-species matrix with occurrence probabilities of 293 bird species across 2,669 spatial units tiling completely the study area. Based on this matrix, we calculated pairwise dissimilarities scores and performed a hierarchical cluster analysis for describing the spatial configuration of dissimilarities. The clustering result was spatially represented through an original venation map with boundaries between sites widened in the function of their distance in the dendrogram. We used the Generalized Dissimilarity Modelling approach to model beta diversity, using geographic distance, climatic and land use/land cover information as predictors. We mapped beta diversity patterns using colour theory and the HSV colour model. We identified two main clusters of sites across the Gran Chaco, which represent environmentally different sites and harbour very distinct assemblages of species. These main groups are separated by two natural delimiters: The Bermejo-Pilcomayo interfluvium and the Lower Paraná floodplain. Overall, we observed that the percentage of cropland and climatic variables were important shapers of bird beta diversity. Main conclusions: We provide the first area-wide assessment of land use/land cover effects on bird beta diversity for the Gran Chaco. The distribution of croplands has a marked influence on bird beta diversity at regional scale highlighting the role of anthropic changes in reshaping bird beta diversity within the ecoregion. Taking into account the global increasing conversion of forests into croplands, a growing footprint of land use changes over geographical patterns of bird diversity in forest biomes can be anticipated.Fil: Nazaro, María Gabriela. Universidad Nacional de Tucumán. Instituto de Ecología Regional. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Instituto de Ecología Regional; ArgentinaFil: Dos Santos, Daniel Andrés. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Instituto de Biodiversidad Neotropical. Universidad Nacional de Tucumán. Facultad de Ciencias Naturales e Instituto Miguel Lillo. Instituto de Biodiversidad Neotropical. Instituto de Biodiversidad Neotropical; ArgentinaFil: Torres, Ricardo Marcelo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Diversidad y Ecología Animal. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas Físicas y Naturales. Instituto de Diversidad y Ecología Animal; ArgentinaFil: Baumann, Matthias. Humboldt-universitat Zu Berlin. Geography Department.; AlemaniaFil: Blendinger, Pedro Gerardo. Universidad Nacional de Tucumán. Instituto de Ecología Regional. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Instituto de Ecología Regional; Argentin