4,293 research outputs found
Accurate <i>ab initio</i> ro-vibronic spectroscopy of the X<sup>2</sup>∏ CCN radical using explicitly correlated methods
Explicitly correlated CCSD(T)-F12b calculations have been carried out with systematic sequences of correlation consistent basis sets to determine accurate near-equilibrium potential energy surfaces for the X<sup>2</sup>∏ and a<sup>4</sup>Σ<sup>−</sup> electronic states of the CCN radical. After including contributions due to core correlation, scalar relativity, and higher order electron correlation effects, the latter utilizing large-scale multireference configuration interaction calculations, the resulting surfaces were employed in variational calculations of the ro-vibronic spectra. These calculations also included the use of accurate spin-orbit and dipole moment matrix elements. The resulting ro-vibronic transition energies, including the Renner-Teller sub-bands involving the bending mode, agree with the available experimental data to within 3 cm<sup>−1</sup> in all cases. Full sets of spectroscopic constants are reported using the usual second-order perturbation theory expressions. Integrated absorption intensities are given for a number of selected vibronic band origins. A computational procedure similar to that used in the determination of the potential energy functions was also utilized to predict the formation enthalpy of CCN, ΔH<sub>f</sub>(0K) = 161.7 ± 0.5 kcal/mol
Optimized Basis Sets for the Environment in the Domain-Specific Basis Set Approach of the Incremental Scheme
Minimal basis sets, denoted DSBSenv, have been developed based on the segmented basis sets of Ahlrichs and co-workers for use as environmental basis set for the domain-specific basis set incremental scheme with the aim of decreasing the CPU requirements of the incremental scheme. The use of this minimal basis within explicitly correlated (F12) methods has been enabled by the optimization of matching auxiliary basis sets for use in density fitting of two-electron integrals and the resolution-of-the-identity. The accuracy of these auxiliary sets has been validated by calculations on a test set containing small- to medium-sized molecules. The errors due to density fitting are about two to four orders of magnitude smaller than the basis set incompleteness error of the DSBSenv orbital basis sets. Additional reductions in computational cost are tested with the reduced DSBSenv basis sets, where the highest angular momentum functions of the DSBSenv auxiliary basis sets have been removed. The optimized and reduced basis sets are used in the framework of the domain-specific basis set of the incremental scheme to decrease the computation time without significant loss of accuracy. The computation times and accuracy of the previously used environmental basis and that optimized in this work is validated with a test set of medium- to large-sized systems. The optimized and reduced DSBSenv basis sets decrease the CPU-time by about 15.4% and 19.4% compared to the old environmental basis and retains the accuracy in the absolute energy with a standard deviation of 0.99 and 1.06 kJ/mol, respectively
The Phenomenology of a Top Quark Seesaw Model
The top quark seesaw mechanism offers a method for constructing a composite
Higgs field without the usual difficulties that accompany traditional
technicolor or topcolor theories. The focus of this article is to study the
phenomenology of the new physics required by this mechanism. After establishing
a set of criteria for a plausible top quark seesaw theory, we develop two
models, the first of which has a heavy weak singlet fermion with hypercharge
4/3 while the second has, in addition, a heavy weak singlet hypercharge -2/3
fermion. At low energies, these theories contain one or two Higgs doublets
respectively. We then derive the low energy effective Higgs potential in detail
for the two-doublet theory as well as study the likely experimental signatures
for both theories. A strong constraint on the one-doublet model is the measured
value of the rho parameter which permits the new heavy fermion to have a mass
of about 5-7 TeV, when the Higgs has a mass greater than 300 GeV. In the
two-doublet model, mixing of the new heavy Y=-2/3 fermion and the b quark
affects the prediction for R_b. In order to agree with the current limits on
R_b, the mass of this fermion should be at least 12 TeV. The mass of the heavy
Y=4/3 fermion in the two-doublet model is not as sharply constrained by
experiments and can be as light as 2.5 TeV.Comment: 33 pages, 12 figures, uses harvmac and picte
Prescreening and efficiency in the evaluation of integrals over ab initio effective core potentials
New, efficient schemes for the prescreening and evaluation of integrals over effective
core potentials (ECPs) are presented. The screening is shown to give a rigorous,
and close bound, to within on average 10% of the true value. A systematic rescaling
procedure is given to reduce this error to approximately 0.1%. This is then used
to devise a numerically stable recursive integration routine that avoids expensive
quadratures. Tests with CCSD(T) calculations on small silver clusters demonstrate
that the new schemes show no loss in accuracy, while reducing both the power and
prefactor of the scaling with system size. In particular, speedups of roughly 40 times
can be achieved compared to quadrature-based methods
Cryo-EM Structure of Dodecameric Vps4p and Its 2:1 Complex with Vta1p
The type I AAA (ATPase associated with a variety of cellular activities) ATPase Vps4 and its co-factor Vta1p/LIP5 function in membrane remodeling events that accompany cytokinesis, multivesicular body biogenesis, and retrovirus budding, apparently by driving disassembly and recycling of membrane-associated ESCRT (endosomal sorting complex required for transport)-III complexes. Here, we present electron cryomicroscopy reconstructions of dodecameric yeast Vps4p complexes with and without their microtubule interacting and transport (MIT) N-terminal domains and Vta1p co-factors. The ATPase domains of Vps4p form a bowl-like structure composed of stacked hexameric rings. The two rings adopt dramatically different conformations, with the “upper” ring forming an open assembly that defines the sides of the bowl and the lower ring forming a closed assembly that forms the bottom of the bowl. The N-terminal MIT domains of the upper ring localize on the symmetry axis above the cavity of the bowl, and the binding of six extended Vta1p monomers causes additional density to appear both above and below the bowl. The structures suggest models in which Vps4p MIT and Vta1p domains engage ESCRT-III substrates above the bowl and help transfer them into the bowl to be pumped through the center of the dodecameric assembly
Correlation consistent basis sets for explicitly correlated wavefunctions: Pseudopotential-based basis sets for the post- d
Halogen Bonding with Phosphine: Evidence for Mulliken Inner Complexes and the Importance of Relaxation Energy
Intermolecular halogen bonding in complexes of phosphine and dihalogens has been
theoretically investigated using explicitly correlated coupled cluster methods and symmetry
adapted perturbation theory. The complexes H3P· · · ClF, H3P· · · BrF and H3P· · ·IF
are demonstrated to possess unusually strong interactions that are accompanied by an
increase in the induction component of the interaction energy and significant elongation
of the X–Y halogen distance on complex formation. The combination of these factors
is indicative of Mulliken inner complexes and criteria for identifying this classification
are further developed. The importance of choosing an electronic structure method that
describes both dispersion and longer range interactions is demonstrated, along with the
need to account for the change in geometry on complexation formation via relaxation
energy and overall stabilisation energies
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Modelling the effects of gravity waves on stratocumulus clouds observed during VOCALS-UK
During the VOCALS campaign spaceborne satellite observations showed that travelling gravity wave packets, generated by geostrophic adjustment, resulted in perturbations to marine boundary layer (MBL) clouds over the south-east Pacific Ocean (SEP). Often, these perturbations were reversible in that passage of the wave resulted in the clouds becoming brighter (in the wave crest), then darker (in the wave trough) and subsequently recovering their properties after the passage of the wave. However, occasionally the wave packets triggered irreversible changes to the clouds, which transformed from closed mesoscale cellular convection to open form. In this paper we use large eddy simulation (LES) to examine the physical mechanisms that cause this transition. Specifically, we examine whether the clearing of the cloud is due to (i) the wave causing additional cloud-top entrainment of warm, dry air or (ii) whether the additional condensation of liquid water onto the existing drops and the subsequent formation of drizzle are the important mechanisms. We find that, although the wave does cause additional drizzle formation, this is not the reason for the persistent clearing of the cloud; rather it is the additional entrainment of warm, dry air into the cloud followed by a reduction in longwave cooling, although this only has a significant effect when the cloud is starting to decouple from the boundary layer. The result in this case is a change from a stratocumulus to a more patchy cloud regime. For the simulations presented here, cloud condensation nuclei (CCN) scavenging did not play an important role in the clearing of the cloud. The results have implications for understanding transitions between the different cellular regimes in marine boundary layer (MBL) clouds
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