Nucleon electromagnetic form factors in two-flavour QCD

We present results for the nucleon electromagnetic form factors, including the momentum transfer dependence and derived quantities (charge radii and magnetic moment). The analysis is performed using O(a) improved Wilson fermions in Nf=2 QCD measured on the CLS ensembles. Particular focus is placed on a systematic evaluation of the influence of excited states in three-point correlation functions, which lead to a biased evaluation, if not accounted for correctly. We argue that the use of summed operator insertions and fit ans\"atze including excited states allow us to suppress and control this effect. We employ a novel method to perform joint chiral and continuum extrapolations, by fitting the form factors directly to the expressions of covariant baryonic chiral effective field theory. The final results for the charge radii and magnetic moment from our lattice calculations include, for the first time, a full error budget. We find that our estimates are compatible with experimental results within their overall uncertainties.Comment: 22 pages, 10 figures, citations modifie

Nucleon axial form factors from two-flavour Lattice QCD

We present preliminary results on the axial form factor $G_A(Q^2)$ and the induced pseudoscalar form factor $G_P(Q^2)$ of the nucleon. A systematic analysis of the excited-state contributions to form factors is performed on the CLS ensemble `N6' with $m_\pi = 340 \ \text{MeV}$ and lattice spacing $a \sim 0.05 \ \text{fm}$. The relevant three-point functions were computed with source-sink separations ranging from $t_s \sim 0.6 \ \text{fm}$ to $t_s \sim \ 1.4 \ \text{fm}$. We observe that the form factors suffer from non-trivial excited-state contributions at the source-sink separations available to us. It is noted that naive plateau fits underestimate the excited-state contributions and that the method of summed operator insertions correctly accounts for these effects.Comment: 7 pages, 12 figures; talk presented at Lattice 2014 -- 32nd International Symposium on Lattice Field Theory, 23-28 June, 2014, Columbia University New York, N

Constraining quasar host halo masses with the strength of nearby Lyman-alpha forest absorption

Using cosmological hydrodynamic simulations we measure the mean transmitted flux in the Lyman alpha forest for quasar sightlines that pass near a foreground quasar. We find that the trend of absorption with pixel-quasar separation distance can be fitted using a simple power law form including the usual correlation function parameters r_{0} and \gamma so that ( = \sum exp(-tau_eff*(1+(r/r_{0})^(-\gamma)))). From the simulations we find the relation between r_{0} and quasar mass and formulate this as a way to estimate quasar host dark matter halo masses, quantifying uncertainties due to cosmological and IGM parameters, and redshift errors. With this method, we examine data for ~3000 quasars from the Sloan Digital Sky Survey (SDSS) Data Release 3, assuming that the effect of ionizing radiation from quasars (the so-called transverse proximity effect) is unimportant (no evidence for it is seen in the data.) We find that the best fit host halo mass for SDSS quasars with mean redshift z=3 and absolute G band magnitude -27.5 is log10(M/M_sun) = 12.48^{+0.53}_{-0.89}. We also use the Lyman-Break Galaxy (LBG) and Lyman alpha forest data of Adelberger et al in a similar fashion to constrain the halo mass of LBGs to be log10(M/M_sun) = 11.13^{+0.39}_{-0.55}, a factor of ~20 lower than the bright quasars. In addition, we study the redshift distortions of the Lyman alpha forest around quasars, using the simulations. We use the quadrupole to monopole ratio of the quasar-Lyman alpha forest correlation function as a measure of the squashing effect. We find that this does not have a measurable dependence on halo mass, but may be useful for constraining cosmic geometry.Comment: 10 pages, 11 figures, submitted to MNRA

Theory of ground state cooling of a mechanical oscillator using dynamical back-action

A quantum theory of cooling of a mechanical oscillator by radiation pressure-induced dynamical back-action is developed, which is analogous to sideband cooling of trapped ions. We find that final occupancies well below unity can be attained when the mechanical oscillation frequency is larger than the cavity linewidth. It is shown that the final average occupancy can be retrieved directly from the optical output spectrum.Comment: 5 pages, 2 figure

The EMT-activator ZEB1 is unrelated to platinum drug resistance in ovarian cancer but is predictive of survival

The IGROVCDDP cisplatin-resistant ovarian cancer cell line is an unusual model, as it is also cross-resistant to paclitaxel. IGROVCDDP, therefore, models the resistance phenotype of serous ovarian cancer patients who have failed frontline platinum/taxane chemotherapy. IGROVCDDP has also undergone epithelial-mesenchymal transition (EMT). We aim to determine if alterations in EMT-related genes are related to or independent from the drug-resistance phenotypes. EMT gene and protein markers, invasion, motility and morphology were investigated in IGROVCDDP and its parent drug-sensitive cell line IGROV-1. ZEB1 was investigated by qPCR, Western blotting and siRNA knockdown. ZEB1 was also investigated in publicly available ovarian cancer gene-expression datasets. IGROVCDDP cells have decreased protein levels of epithelial marker E-cadherin (6.18-fold, p = 1.58e−04) and higher levels of mesenchymal markers vimentin (2.47-fold, p = 4.43e−03), N-cadherin (4.35-fold, p = 4.76e−03) and ZEB1 (3.43-fold, p = 0.04). IGROVCDDP have a spindle-like morphology consistent with EMT. Knockdown of ZEB1 in IGROVCDDP does not lead to cisplatin sensitivity but shows a reversal of EMT-gene signalling and an increase in cell circularity. High ZEB1 gene expression (HR = 1.31, n = 2051, p = 1.31e−05) is a marker of poor overall survival in high-grade serous ovarian-cancer patients. In contrast, ZEB1 is not predictive of overall survival in high-grade serous ovarian-cancer patients known to be treated with platinum chemotherapy. The increased expression of ZEB1 in IGROVCDDP appears to be independent of the drug-resistance phenotypes. ZEB1 has the potential to be used as biomarker of overall prognosis in ovarian-cancer patients but not of platinum/taxane chemoresistance

The high-lying 6^6Li levels at excitation energy around 21 MeV

The $^3$H+$^3$He cluster structure in $^6$Li was investigated by the $^3$H($\alpha$,$^3$H $^3$He)n kinematically complete experiment at the incident energy $E_\alpha$ = 67.2 MeV. We have observed two resonances at $E_x^*$ = 21.30 and 21.90 MeV which are consistent with the $^3$He($^3$H, $\gamma$)$^6$Li analysis in the Ajzenberg-Selove compilation. Our data are compared with the previous experimental data and the RGM and CSRGM calculations.Comment: 12 pages, 6 figures. Accepted for publication in J. Phys. Soc. Jp

Calibration and application of B/Ca, Cd/Ca, and δ^(11)B in Neogloboquadrina pachyderma (sinistral) to constrain CO_2 uptake in the subpolar North Atlantic during the last deglaciation

The North Atlantic and Norwegian Sea are prominent sinks of atmospheric CO_2 today, but their roles in the past remain poorly constrained. In this study, we attempt to use B/Ca and δ^(11)B ratios in the planktonic foraminifera Neogloboquadrina pachyderma (sinistral variety) to reconstruct subsurface water pH and pCO_2 changes in the polar North Atlantic during the last deglaciation. Comparison of core-top results with nearby hydrographic data shows that B/Ca in N. pachyderma (s) is mainly controlled by seawater B(OH)_4−/HCO_3− with a roughly constant partition coefficient (K_D = [B/Ca]_(CaCO_3) / [B(OH)_4−/HCO_3− (seawater)) of 1.48 ± 0.15 × 10^(−3) (2σ), and δ^(11)B in this species is offset below δ^(11)B of the borate in seawater by 3.38 ± 0.71‰ (2σ). These values represent our best estimates with the sparse available hydrographic data close to our core-tops. More culturing and sediment trap work is needed to improve our understanding of boron incorporation into N. pachyderma (s). Application of a constant K_D of 1.48 × 10^(−3) to high resolution N. pachyderma (s) B/Ca records from two adjacent cores off Iceland shows that subsurface pCO_2 at the habitat depth of N. pachyderma (s) (~50 m) generally followed the atmospheric CO_2 trend but with negative offsets of ~10–50 ppmv during 19–10 ka. These B/Ca-based reconstructions are supported by independent estimates from low-resolution δ^(11)B measurements in the same cores. We also calibrate and apply Cd/Ca in N. pachyderma (s) to reconstruct nutrient levels for the same down cores. Like today's North Atlantic, past subsurface pCO_2 variability off Iceland was significantly correlated with nutrient changes that might be linked to surface nutrient utilization and mixing within the upper water column. Because surface pCO_2 (at 0 m water depth) is always lower than at deeper depths and if the application of a constant KD is valid, our results suggest that the polar North Atlantic has remained a CO_2 sink during the calcification seasons of N. pachyderma (s) over the last deglaciation

The epigenetic mechanism of mechanically induced osteogenic differentiation

Epigenetic regulation of gene expression occurs due to alterations in chromatin proteins that do not change DNA sequence, but alter the chromatin architecture and the accessibility of genes, resulting in changes to gene expression that are preserved during cell division. Through this process genes are switched on or off in a more durable fashion than other transient mechanisms of gene regulation, such as transcription factors. Thus, epigenetics is central to cellular differentiation and stem cell linage commitment. One such mechanism is DNA methylation, which is associated with gene silencing and is involved in a cell’s progression towards a specific fate. Mechanical signals are a crucial regulator of stem cell behavior and important in tissue differentiation; however, there has been no demonstration of a mechanism whereby mechanics can affect gene regulation at the epigenetic level. In this study, we identified candidate DNA methylation sites in the promoter regions of three osteogenic genes from bone marrow derived mesenchymal stem cells (MSCs). We demonstrate that mechanical stimulation alters their epigenetic state by reducing DNA methylation and show an associated increase in expression. We contrast these results with biochemically induced differentiation and distinguish expression changes associated with durable epigenetic regulation from those likely to be due to transient changes in regulation. This is an important advance in stem cell mechanobiology as it is the first demonstration of a mechanism by which the mechanical micro-environment is able to induce epigenetic changes that control osteogenic cell fate, and that can be passed to daughter cells. This is a first step to understanding that will be vital to successful bone tissue engineering and regenerative medicine, where continued expression of a desired long-term phenotype is crucial

Plasma-Induced Frequency Chirp of Intense Femtosecond Lasers and Its Role in Shaping High-Order Harmonic Spectral Lines

We investigate the self-phase modulation of intense femtosecond laser pulses propagating in an ionizing gas and its effects on collective properties of high-order harmonics generated in the medium. Plasmas produced in the medium are shown to induce a positive frequency chirp on the leading edge of the propagating laser pulse, which subsequently drives high harmonics to become positively chirped. In certain parameter regimes, the plasma-induced positive chirp can help to generate sharply peaked high harmonics, by compensating for the dynamically-induced negative chirp that is caused by the steep intensity profile of intense short laser pulses.Comment: 5 pages, 5 figure