9 research outputs found

    Computer Literacy - Erwerb einer Basiskompetenz

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    Das Projekt Literalität in Alltag und Beruf (LAB) entwickelt und erprobt spezifische Methoden der Weiterbildung. Es richtet sich an Erwachsene mit Schwierigkeiten im Umgang mit den Basiskompetenzen Schriftgebrauch und Alltagsmathematik. Generelles Ziel des Programms ist, die Arbeitsmarktfähigkeit von Bildungsbenachteiligten zu erreichen, wo möglich zu erhalten und zu steigern. Weiter soll den Teilnehmenden durch die Stärkung von literalen Grundkompetenzen der Zugang zu bestehenden Weiterbildungsangeboten in ihrem beruflichen Umfeld ermöglicht oder erleichtert werden

    Model-based inference of neutralizing antibody avidities against influenza virus

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    To assess the response to vaccination, quantity (concentration) and quality (avidity) of neutralizing antibodies are the most important parameters. Specifically, an increase in avidity indicates germinal center formation, which is required for establishing long-term protection. For influenza, the classical hemagglutination inhibition (HI) assay, however, quantifies a combination of both, and to separately determine avidity requires high experimental effort. We developed from first principles a biophysical model of hemagglutination inhibition to infer IgG antibody avidities from measured HI titers and IgG concentrations. The model accurately describes the relationship between neutralizing antibody concentration/avidity and HI titer, and explains quantitative aspects of the HI assay, such as robustness to pipetting errors and detection limit. We applied our model to infer avidities against the pandemic 2009 H1N1 influenza virus in vaccinated patients (n = 45) after hematopoietic stem cell transplantation (HSCT) and validated our results with independent avidity measurements using an enzyme-linked immunosorbent assay with urea elution. Avidities inferred by the model correlated with experimentally determined avidities (ρ = 0.54, 95% CI = [0.31, 0.70], P < 10−4). The model predicted that increases in IgG concentration mainly contribute to the observed HI titer increases in HSCT patients and that immunosuppressive treatment is associated with lower baseline avidities. Since our approach requires only easy-to-establish measurements as input, we anticipate that it will help to disentangle causes for poor vaccination outcomes also in larger patient populations. This study demonstrates that biophysical modelling can provide quantitative insights into agglutination assays and complement experimental measurements to refine antibody response analyses.ISSN:1553-7374ISSN:1553-736

    Association of host factors with antibody response to seasonal influenza vaccination in allogeneic hematopoietic stem cell transplant (HSCT) patients

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    BACKGROUND Influenza vaccination efficacy is reduced after hematopoietic stem cell transplantation (HSCT) and patient factors determining vaccination outcomes are still poorly understood. METHODS We investigated the antibody response to seasonal influenza vaccination in 135 HSCT patients and 69 healthy volunteers (HVs) in a prospective observational multicenter cohort study. We identified patient factors associated with hemagglutination inhibition titers against A/California/2009/H1N1, A/Texas/2012/H3N2, and B/Massachusetts/2012 by multivariable regression on the observed titer levels and on seroconversion/seroprotection categories for comparison. RESULTS Both regression approaches yield consistent results but regression on titers estimated associations with higher precision. HSCT patients required two vaccine doses to achieve average responses comparable to a single dose in HVs. Pre-vaccination titers were positively associated with time after transplantation, confirming that HSCT patients can elicit potent antibody responses. However, an unrelated donor, absolute lymphocyte counts below the normal range and treatment with calcineurin inhibitors lower the odds of responding. CONCLUSIONS HSCT patients show a highly heterogeneous vaccine response, but overall, patients benefited from the booster shot and can acquire seroprotective antibodies over the years after transplantation. Several common patient factors lower the odds of responding, urging to identify additional preventive strategies in the poorly responding groups

    Characterising the epidemic spread of influenza A/H3N2 within a city through phylogenetics

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    Infecting large portions of the global population, seasonal influenza is a major burden on societies around the globe. While the global source sink dynamics of the different seasonal influenza viruses have been studied intensively, its local spread remains less clear. In order to improve our understanding of how influenza is transmitted on a city scale, we collected an extremely densely sampled set of influenza sequences alongside patient metadata. To do so, we sequenced influenza viruses isolated from patients of two different hospitals, as well as private practitioners in Basel, Switzerland during the 2016/2017 influenza season. The genetic sequences reveal that repeated introductions into the city drove the influenza season. We then reconstruct how the effective reproduction number changed over the course of the season. While we did not find that transmission dynamics in Basel correlate with humidity or school closures, we did find some evidence that it may positively correlated with temperature. Alongside the genetic sequence data that allows us to see how individual cases are connected, we gathered patient information, such as the age or household status. Zooming into the local transmission outbreaks suggests that the elderly were to a large extent infected within their own transmission network. In the remaining transmission network, our analyses suggest that school-aged children likely play a more central role than pre-school aged children. These patterns will be valuable to plan interventions combating the spread of respiratory diseases within cities given that similar patterns are observed for other influenza seasons and cities

    Identification of influenza urban transmission patterns by geographical, epidemiological and whole genome sequencing data: protocol for an observational study

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    Introduction Urban transmission patterns of influenza viruses are complex and poorly understood, and multiple factors may play a critical role in modifying transmission. Whole genome sequencing (WGS) allows the description of patient-to-patient transmissions at highest resolution. The aim of this study is to explore urban transmission patterns of influenza viruses in high detail by combining geographical, epidemiological and immunological data with WGS data. Methods and analysis The study is performed at the University Hospital Basel, University Children's Hospital Basel and a network of paediatricians and family doctors in the Canton of Basel-City, Switzerland. The retrospective study part includes an analysis of PCR-confirmed influenza cases from 2013 to 2018. The prospective study parts include (1) a household survey regarding influenza-like illness (ILI) and vaccination against influenza during the 2015/2016 season; (2) an analysis of influenza viruses collected during the 2016/2017 season using WGS-viral genomic sequences are compared with determine genetic relatedness and transmissions; and (3) measurement of influenza-specific antibody titres against all vaccinated and circulated strains during the 2016/2017 season from healthy individuals, allowing to monitor herd immunity across urban quarters. Survey data and PCR-confirmed cases are linked to data from the Statistics Office of the Canton Basel-City and visualised using geo-information system mapping. WGS data will be analysed in the context of patient epidemiological data using phylodynamic analyses, and the obtained herd immunity for each quarter. Profound knowledge on the key geographical, epidemiological and immunological factors influencing urban influenza transmission will help to develop effective counter measurements. Ethics and dissemination The study is registered and approved by the regional ethics committee as an observational study (EKNZ project ID 2015-363 and 2016-01735). It is planned to present the results at conferences and publish the data in scientific journals

    Plasmas Froids : Systèmes d'analyse, Modélisation et Rayonnement

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    I - Physique et applications atmosphériques des filaments de plasma générés par des impulsions laser ultrabrèves (Jérôme Kasparian, Jean Pierre Wolf) Spectroscopie d'émission optique sur plasma induit par laser : Principe et applications (Patrick Mauchien, Catherine Gallou, Jean Luc Lacour, Laurent Salmon) II-2. Spectroscopie de fluorescence induite par diodes laser : Application au diagnostic des plasmas (Stéphane Mazouffre) II-3. Un capteur de flux d'énergie dans les plasmas (A.-L. Thomann, N. Semmar, R. Dussart, L. Bedra, J. Mathias, Y. Tessier et S. Mazouffre) III-1. Modélisation de la photoionisation dans les plasmas d'air non-thermiques à la pression atmosphérique (Anne Bourdon, Sébastien Célestin, Julien Capeillère et Pierre Ségur) III-2. Modélisation des plasmas produits par interaction laser-matière (Tatiana E. Itina) IV-1. Propriétés et transferts radiatifs dans les plasmas (M.Y. Perrin, A. Soufiani, Ph. Riviere) IV-2. Modifications induites en surface de polymères par traitement laser (Patricia Laurens, Sophie Petit) IV-3. Lampes fluorescentes sans mercure, à la recherche de l'efficacité énergétique (Eric Robert, Sébastien Point, Sébastien Dozias, Christophe Cachoncinlle, Raymond Viladrosa et Jean Michel Pouvesle) IV-4. Sources plasmas de rayonnement X créées par laser (Fabien Dorchies) Importance du rayonnement dans les procédés thermiques industriels (Yann Cressault, Philippe Teulet, Jean-Jacques Gonzalez, Alain Gleizes) La spectroscopie optique appliquée à l'étude des disjoncteurs (Dunpin Hong, Jean-Marc Bauchire et François Gentils) Exemples de micro plasmas à haute densité : Électroérosion et ouverture de contacts électriques (Jean-Luc Dorier, Antoine Descoeudres, Christoph Hollenstein) Chauffage et génération de courant par ondes dans les tokamaks (Gérard Bonhomme
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