Relationship between body measurements and performance traits in boars

Fourteen body measurements were taken on 259 boars at 65 lbs. and again at 250 lbs. determine the relationship of external body dimensions with certain performance traits. Correlations between body measurements and growth tended to be extremely low for most factors. Our results do not support using body measurements as v1sual indicators of growth. This study suggests that performance testing is still the best way to predict a particular animal’s genetic potential.; Swine Day, Manhattan, KS, November 11, 197

Effect of extrusion on the nutritional value of soybeans and sorghum grain in finishing pigs

A total of 112 finishing pigs (avg initial wt of 139 lb) was used to determine the effects of adding extruded soybeans and/or sorghum grain to diets for finishing pigs. Treatments were: 1) sorghum-soybean meal control (sorghum-SBM), 2) extruded soybeans and ground sorghum, 3) SBM and extruded sorghum, and 4) extruded soybeans and sorghum. All diets were isocaloric and isolysinic. Using extruded soybeans and/or sorghum improved efficiency of gain compared to the sorghum-SBM control. This response was apparently related to the improved digestibilities of dry matter and nitrogen with the use of extruded ingredients. Optimum digestibility of dry matter and nitrogen was achieved when just the sorghum was extruded, but optimum growth performance (ie., efficiency of gain) was achieved when extruded sorghum and soybeans were added to the diet.; Swine Day, Manhattan, KS, November 15, 199

9.7 um Silicate Features in AGNs: New Insights into Unification Models

We describe observations of 9.7 um silicate features in 97 AGNs, exhibiting a wide range of AGN types and of X-ray extinction toward the central nuclei. We find that the strength of the silicate feature correlates with the HI column density estimated from fitting the X-ray data, such that low HI columns correspond to silicate emission while high columns correspond to silicate absorption. The behavior is generally consistent with unification models where the large diversity in AGN properties is caused by viewing-angle-dependent obscuration of the nucleus. Radio-loud AGNs and radio-quiet quasars follow roughly the correlation between HI columns and the strength of the silicate feature defined by Seyfert galaxies. The agreement among AGN types suggests a high-level unification with similar characteristics for the structure of the obscuring material. We demonstrate the implications for unification models qualitatively with a conceptual disk model. The model includes an inner accretion disk (< 0.1 pc in radius), a middle disk (0.1-10 pc in radius) with a dense diffuse component and with embedded denser clouds, and an outer clumpy disk (10-300 pc in radius).Comment: Accepted for publication in ApJ, 14 pages, 5 figures. The on-line table is available at http://cztsy.as.arizona.edu/~yong/silicate_tab1.pd

Developmental seizures and mortality result from reducing GABAᴀ receptor α2-subunit interaction with collybistin

Fast inhibitory synaptic transmission is mediated by γ-aminobutyric acid type A receptors (GABAARs) that are enriched at functionally diverse synapses via mechanisms that remain unclear. Using isothermal titration calorimetry and complementary methods we demonstrate an exclusive low micromolar binding of collybistin to the α2-subunit of GABAARs. To explore the biological relevance of collybistin-α2-subunit selectivity, we generate mice with a mutation in the α2-subunit-collybistin binding region (Gabra2-1). The mutation results in loss of a distinct subset of inhibitory synapses and decreased amplitude of inhibitory synaptic currents. Gabra2–1 mice have a striking phenotype characterized by increased susceptibility to seizures and early mortality. Surviving Gabra2-1 mice show anxiety and elevations in electroencephalogram δ power, which are ameliorated by treatment with the α2/α3-selective positive modulator, AZD7325. Taken together, our results demonstrate an α2-subunit selective binding of collybistin, which plays a key role in patterned brain activity, particularly during development

Change in Abundance of Pacific Brant Wintering in Alaska: Evidence of a Climate Warming Effect?

Winter distribution of Pacific Flyway brant (Branta bernicla nigricans) has shifted northward from low-temperate areas to sub-Arctic areas over the last 42 years. We assessed the winter abundance and distribution of brant in Alaska to evaluate whether climate warming may be contributing to positive trends in the most northern of the wintering populations. Mean surface air temperatures during winter at the end of the Alaska Peninsula increased about 1°C between 1963 and 2004, resulting in a 23% reduction in freezing degree days and a 34% decline in the number of days when ice cover prevents birds from accessing food resources. Trends in the wintering population fluctuated with states of the Pacific Decadal Oscillation, increasing during positive (warm) phases and decreasing during negative (cold) phases, and this correlation provides support for the hypothesis that growth in the wintering population of brant in Alaska is linked to climate warming. The size of the wintering population was negatively correlated with the number of days of strong northwesterly winds in November, which suggests that the occurrence of tailwinds favorable for migration before the onset of winter was a key factor in whether brant migrated from Alaska or remained there during winter. Winter distribution of brant on the Alaska Peninsula was highly variable and influenced by ice cover, particularly at the heavily used Izembek Lagoon. Observations of previously marked brant indicated that the Alaska wintering population was composed primarily of birds originating from Arctic breeding colonies that appear to be growing. Numbers of brant in Alaska during winter will likely increase as temperatures rise and ice cover decreases at high latitudes in response to climate warming.Au cours des 42 dernières années, la répartition de la bernache cravant du Pacifique (Branta bernicla nigricans) s’est déplacée vers le nord en hiver, passant ainsi de régions faiblement tempérées à des régions subarctiques. Nous avons évalué l’abondance et la répartition de la bernache en Alaska l’hiver afin de tenter de déterminer si le réchauffement climatique contribue aux tendances positives au sein des populations d’hivernage les plus au nord. Les températures moyennes de l’air à la surface en hiver se sont accrues d’environ 1°C entre 1963 et 2004, ce qui s’est traduit par une réduction de 23 % du nombre de jours atteignant le point de congélation et d’une diminution de 34 % du nombre de jours pendant lesquels la couverture de glace empêche les oiseaux d’avoir accès aux ressources alimentaires. Les tendances caractérisant la population d’hivernage fluctuaient en fonction des états de l’oscillation pacifique décennale en ce sens qu’elles augmentaient pendant les phases positives (tièdes) et qu’elles baissaient pendant les phases négatives (froides). Cette corrélation vient appuyer l’hypothèse selon laquelle la croissance de la population d’hivernage de la bernache en Alaska est liée au réchauffement climatique. L’effectif de la population d’hivernage a été négativement corrélé au nombre de jours de vents forts en provenance du nord-ouest en novembre, ce qui laisse croire que l’occurrence de vents arrières favorables à la migration avant le début de l’hiver constituait un facteur-clé déterminant si une bernache migrait de l’Alaska ou y restait pendant l’hiver. Dans la péninsule de l’Alaska, la répartition de la bernache en hiver variait énormément et dépendait de la couverture de glace, surtout à la lagune Izembek particulièrement achalandée. Les observations de bernaches déjà marquées ont permis de constater que la population d’hivernage de l’Alaska était principalement composée d’oiseaux provenant des colonies de reproduction de l’Arctique qui semblent prendre de l’ampleur. Le nombre de bernaches en Alaska pendant l’hiver augmentera vraisemblablement au fur et à mesure que les températures augmenteront et que les couvertures de glace diminueront en haute latitude en raison du réchauffement climatique

Simulation of networks of spiking neurons: A review of tools and strategies

We review different aspects of the simulation of spiking neural networks. We start by reviewing the different types of simulation strategies and algorithms that are currently implemented. We next review the precision of those simulation strategies, in particular in cases where plasticity depends on the exact timing of the spikes. We overview different simulators and simulation environments presently available (restricted to those freely available, open source and documented). For each simulation tool, its advantages and pitfalls are reviewed, with an aim to allow the reader to identify which simulator is appropriate for a given task. Finally, we provide a series of benchmark simulations of different types of networks of spiking neurons, including Hodgkin-Huxley type, integrate-and-fire models, interacting with current-based or conductance-based synapses, using clock-driven or event-driven integration strategies. The same set of models are implemented on the different simulators, and the codes are made available. The ultimate goal of this review is to provide a resource to facilitate identifying the appropriate integration strategy and simulation tool to use for a given modeling problem related to spiking neural networks.Comment: 49 pages, 24 figures, 1 table; review article, Journal of Computational Neuroscience, in press (2007

Quantum dynamics of a model for two Josephson-coupled Bose--Einstein condensates

In this work we investigate the quantum dynamics of a model for two single-mode Bose--Einstein condensates which are coupled via Josephson tunneling. Using direct numerical diagonalisation of the Hamiltonian, we compute the time evolution of the expectation value for the relative particle number across a wide range of couplings. Our analysis shows that the system exhibits rich and complex behaviours varying between harmonic and non-harmonic oscillations, particularly around the threshold coupling between the delocalised and self-trapping phases. We show that these behaviours are dependent on both the initial state of the system as well as regime of the coupling. In addition, a study of the dynamics for the variance of the relative particle number expectation and the entanglement for different initial states is presented in detail.Comment: 15 pages, 8 eps figures, accepted in J. Phys.

Predicion of charge separation in GaAs/AlAs cylindrical Russian Doll nanostructures

We have contrasted the quantum confinement of (i) multiple quantum wells of flat GaAs and AlAs layers, i.e. (\GaAs)_{m}/(\AlAs)_n/(\GaAs)_p/(\AlAs)_q, with (ii) ``cylindrical Russian Dolls'' -- an equivalent sequence of wells and barriers arranged as concentric wires. Using a pseudopotential plane-wave calculation, we identified theoretically a set of numbers ($m,n,p$ and $q$) such that charge separation can exist in ``cylindrical Russian Dolls'': the CBM is localized in the inner GaAs layer, while the VBM is localized in the outer GaAs layer.Comment: latex, 8 page

Effects of exotic soybean genotype on growth performance, nutrient digestibility, and carcass traits in finishing pigs

Compared to a corn-soybean meal control, added-fat from tallow, soybean oil, and dry-extruded whole soybeans (DEWS) improved ADG, F/G, and digestibility of DM and N. Feeding tallow increased belly firmness but also increased backfat thickness compared to diets with soy oil and DEWS. Comparisons among soybean genotypes indicated that high oleic acid soybeans supported greater growth performance than soybeans with high palmitic acid content. However, soybean genotype had no effect on carcass or meat quality measurements.; Swine Day, Manhattan, KS, November 19, 199

Iron Age and Anglo-Saxon genomes from East England reveal British migration history

British population history has been shaped by a series of immigrations, including the early Anglo-Saxon migrations after 400 CE. It remains an open question how these events affected the genetic composition of the current British population. Here, we present whole-genome sequences from 10 individuals excavated close to Cambridge in the East of England, ranging from the late Iron Age to the middle Anglo-Saxon period. By analysing shared rare variants with hundreds of modern samples from Britain and Europe, we estimate that on average the contemporary East English population derives 38% of its ancestry from Anglo-Saxon migrations. We gain further insight with a new method, rarecoal, which infers population history and identifies fine-scale genetic ancestry from rare variants. Using rarecoal we find that the Anglo-Saxon samples are closely related to modern Dutch and Danish populations, while the Iron Age samples share ancestors with multiple Northern European populations including Britain