692 research outputs found
A prospective study of plasma fish oil levels and incidence of myocardial infarction in U.S. male physicians
AbstractObjectives. This study evaluated whether increased intake of fish oils (eicosapentaenoic and docosahexaenoic acids) might reduce the risk of coronary heart disease.Background.Observational and clinical studies have suggested that increased intake of fish oils, as reflected in plasma levels of fish oils, may reduce the risk of myocardial infarction.Methods.A nested case-control study was conducted among the 14,916 participants in the Physicians' Health Study with a sample of plasma before randomization. Each participant with myocardial infarction occurring during the first 5 years of follow-up was matched by smoking status and age with a randomly chosen control participant who had not developed coronary heart disease.Results.Mean levels of fish oils (with 95% confidence interval [CI] for paired differences and p values) in case and control participants, expressed as present of total fatty acids, were, for eicosapentaenoic acid, 0.26 versus 0.25 (95% CI - 0.03 to 0.05, p = 0.70) in cholesterol esters and 0.56 versus 0.54 (95% CI -0.04 to 0.09, p = 0.44) in phospholipids, and for docosahexaenoic acid, 0.23 versus 0.24 (95% CI -0.07 to 0.04, p = 0.64) in cholesterol esters and 2.22 versus 2.14 (95% CI -0.10 to 0.27, p = 0.36) in phospholipids. Results adjusted for major cardiovascular risk factors showed a very similar lack of association between fish oil levels and the incidence of myocardial infarction.Conclusions.These results indicate no beneficial effect of increased fish oil consumption on the incidence of a first myocardial infarction. However, the effect of very high levels of fish oils could not be evaluated
Contrasting vegetation change (1974-2015) in hedgerows and forests in an intensively used agricultural landscape
Medical causes of admissions to hospital among adults in Africa: a systematic review.
BACKGROUND: Despite the publication of several studies on the subject, there is significant uncertainty regarding the burden of disease among adults in sub-Saharan Africa (sSA). OBJECTIVES: To describe the breadth of available data regarding causes of admission to hospital, to systematically analyze the methodological quality of these studies, and to provide recommendations for future research. DESIGN: We performed a systematic online and hand-based search for articles describing patterns of medical illnesses in patients admitted to hospitals in sSA between 1950 and 2010. Diseases were grouped into bodily systems using International Classification of Disease (ICD) guidelines. We compared the proportions of admissions and deaths by diagnostic category using χ2. RESULTS: Thirty articles, describing 86,307 admissions and 9,695 deaths, met the inclusion criteria. The leading causes of admission were infectious and parasitic diseases (19.8%, 95% confidence interval [CI] 19.6-20.1), respiratory (16.2%, 95% CI 16.0-16.5) and circulatory (11.3%, 95% CI 11.1-11.5) illnesses. The leading causes of death were infectious and parasitic (17.1%, 95% CI 16.4-17.9), circulatory (16%, 95% CI 15.3-16.8) and digestive (16.2%, 95% CI 15.4-16.9). Circulatory diseases increased from 3.9% of all admissions in 1950-59 to 19.9% in 2000-2010 (RR 5.1, 95% CI 4.5-5.8, test for trend p<0.00005). The most prevalent methodological deficiencies, present in two-thirds of studies, were failures to use standardized case definitions and ICD guidelines for classifying illnesses. CONCLUSIONS: Cardiovascular and infectious diseases are currently the leading causes of admissions and in-hospital deaths in sSA. Methodological deficiencies have limited the usefulness of previous studies in defining national patterns of disease in adults. As African countries pass through demographic and health transition, they need to significantly invest in clinical research capacity to provide an accurate description of the disease burden among adults for public health policy
Which circulating antioxidant vitamins are confounded by socioeconomic deprivation? The MIDSPAN family study
<p><b>Background:</b> Antioxidant vitamins are often described as having “independent” associations with risk of cancer, cardiovascular disease (CVD) and mortality. We aimed to compare to what extent a range of antioxidant vitamins and carotenoids are associated with adulthood and childhood markers of socioeconomic deprivation and to adverse lifestyle factors.</p>
<p><b>Methods and Findings:</b> Socioeconomic and lifestyle measures were available in 1040 men and 1298 women from the MIDSPAN Family Study (30–59 years at baseline) together with circulating levels of vitamins A, C, E, and carotenoids (α-carotene, β-carotene, lutein and lycopene). Markers of socioeconomic deprivation in adulthood were consistently as strongly associated with lower vitamin C and carotenoid levels as markers of adverse lifestyle; the inverse association with overcrowding was particularly consistent (vitamin C and carotenoids range from 19.1% [95% CI 30.3–6.0] to 38.8% [49.9–25.3] lower among those in overcrowded residencies). These associations were consistent after adjusting for month, classical CVD risk factors, body mass index, physical activity, vitamin supplements, dietary fat and fibre intake. Similar, but weaker, associations were seen for childhood markers of deprivation. The association of vitamin A or E were strikingly different; several adult adverse lifestyle factors associated with higher levels of vitamin A and E, including high alcohol intake for vitamin A (9.5% [5.7–13.5]) and waist hip ratio for vitamin E (9.5% [4.8–14.4]), with the latter associations partially explained by classical risk factors, particularly cholesterol levels.</p>
<p><b>Conclusions:</b> Plasma vitamin C and carotenoids have strong inverse associations with adulthood markers of social deprivation, whereas vitamin A and E appear positively related to specific adverse lifestyle factors. These findings should help researchers better contextualize blood antioxidant vitamin levels by illustrating the potential limitations associated with making causal inferences without consideration of social deprivation.</p>
Assessing the role of EO in biodiversity monitoring: options for integrating in-situ observations with EO within the context of the EBONE concept
The European Biodiversity Observation Network (EBONE) is a European contribution on terrestrial monitoring to GEO BON, the Group on Earth Observations Biodiversity Observation Network. EBONE’s aims are to develop a system of biodiversity observation at regional, national and European levels by assessing existing approaches in terms of their validity and applicability starting in Europe, then expanding to regions in Africa. The objective of EBONE is to deliver:
1. A sound scientific basis for the production of statistical estimates of stock and change of key indicators;
2. The development of a system for estimating past changes and forecasting and testing policy options and management strategies for threatened ecosystems and species;
3. A proposal for a cost-effective biodiversity monitoring system.
There is a consensus that Earth Observation (EO) has a role to play in monitoring biodiversity. With its capacity to observe detailed spatial patterns and variability across large areas at regular intervals, our instinct suggests that EO could deliver the type of spatial and temporal coverage that is beyond reach with in-situ efforts. Furthermore, when considering the emerging networks of in-situ observations, the prospect of enhancing the quality of the information whilst reducing cost through integration is compelling. This report gives a realistic assessment of the role of EO in biodiversity monitoring and the options for integrating in-situ observations with EO within the context of the EBONE concept (cfr. EBONE-ID1.4). The assessment is mainly based on a set of targeted pilot studies. Building on this assessment, the report then presents a series of recommendations on the best options for using EO in an effective, consistent and sustainable biodiversity monitoring scheme.
The issues that we faced were many:
1. Integration can be interpreted in different ways. One possible interpretation is: the combined use of independent data sets to deliver a different but improved data set; another is: the use of one data set to complement another dataset.
2. The targeted improvement will vary with stakeholder group: some will seek for more efficiency, others for more reliable estimates (accuracy and/or precision); others for more detail in space and/or time or more of everything.
3. Integration requires a link between the datasets (EO and in-situ). The strength of the link between reflected electromagnetic radiation and the habitats and their biodiversity observed in-situ is function of many variables, for example: the spatial scale of the observations; timing of the observations; the adopted nomenclature for classification; the complexity of the landscape in terms of composition, spatial structure and the physical environment; the habitat and land cover types under consideration.
4. The type of the EO data available varies (function of e.g. budget, size and location of region, cloudiness, national and/or international investment in airborne campaigns or space technology) which determines its capability to deliver the required output.
EO and in-situ could be combined in different ways, depending on the type of integration we wanted to achieve and the targeted improvement. We aimed for an improvement in accuracy (i.e. the reduction in error of our indicator estimate calculated for an environmental zone). Furthermore, EO would also provide the spatial patterns for correlated in-situ data.
EBONE in its initial development, focused on three main indicators covering:
(i) the extent and change of habitats of European interest in the context of a general habitat assessment;
(ii) abundance and distribution of selected species (birds, butterflies and plants); and
(iii) fragmentation of natural and semi-natural areas.
For habitat extent, we decided that it did not matter how in-situ was integrated with EO as long as we could demonstrate that acceptable accuracies could be achieved and the precision could consistently be improved. The nomenclature used to map habitats in-situ was the General Habitat Classification. We considered the following options where the EO and in-situ play different roles:
using in-situ samples to re-calibrate a habitat map independently derived from EO; improving the accuracy of in-situ sampled habitat statistics, by post-stratification with correlated EO data; and using in-situ samples to train the classification of EO data into habitat types where the EO data delivers full coverage or a larger number of samples.
For some of the above cases we also considered the impact that the sampling strategy employed to deliver the samples would have on the accuracy and precision achieved.
Restricted access to European wide species data prevented work on the indicator ‘abundance and distribution of species’.
With respect to the indicator ‘fragmentation’, we investigated ways of delivering EO derived measures of habitat patterns that are meaningful to sampled in-situ observations
A Corpus of Potentially Contradictory Research Claims from Cardiovascular Research Abstracts
Background: Research literature in biomedicine and related fields contains a huge number
of claims, such as the effectiveness of treatments. These claims are not always consistent and
may even contradict each other. Being able to identify contradictory claims is important for
those who rely on the biomedical literature. Automated methods to identify and resolve them
are required to cope with the amount of information available. However, research in this area
has been hampered by a lack of suitable resources. We describe a methodology to develop a
corpus which addresses this gap by providing examples of potentially contradictory claims and
demonstrate how it can be applied to identify these claims from Medline abstracts related to the
topic of cardiovascular disease.
Methods A set of systematic reviews concerned with four topics in cardiovascular disease were
identified from Medline and analysed to determine whether the abstracts they reviewed contained
contradictory research claims. For each review, annotators were asked to analyse these abstracts
to identify claims within them that answered the question addressed in the review. The annotators
were also asked to indicate how the claim related to that question and the type of the claim.
Results: A total of 259 abstracts associated with 24 systematic reviews were used to form
the corpus. Agreement between the annotators was high, suggesting that the information they
provided is reliable.
Conclusions: The paper describes a methodology for constructing a corpus containing contradictory
research claims from the biomedical literature. The corpus is made available to enable
further research into this area and support the development of automated approaches to contradiction
identification
Rescuing Valuable Arctic Vegetation Data for Biodiversity Models, Ecosystem Models and a Panarctic Vegetation Classification
Profiles and outcome of traditional healing practices for severe mental illnesses in two districts of Eastern Uganda
Background : The WHO estimates that more than 80% of African populations attend traditional healers for health reasons and that 40%–60% of these have some kind of mental illness. However, little is known about the profiles and outcome of this traditional approach to treatment. Objective : The purpose of this study was to describe the profiles and outcome of traditional healing practices for severe mental illnesses in Jinja and Iganga districts in the Busoga region of Eastern Uganda. Methods : Four studies were conducted. Study I used focus group discussions (FGDs) with case vignettes with local community members and traditional healers to explore the lay concepts of psychosis. Studies II and III concerned a cross-sectional survey of patients above 18 years at the traditional healer's shrines and study IV was made on a prospective cohort of patients diagnosed with psychosis in study III. Manual content analysis was used in study I; quantitative data in studies II, III, and IV were analyzed at univariate, bivariate, and multivariate levels to determine the association between psychological distress and socio-demographic factors; for study IV, factors associated with outcome were analyzed. One-way ANOVA for independent samples was the analysis used in Study IV. Results : The community gave indigenous names to psychoses (mania, schizophrenia, and psychotic depression) and had multiple explanatory models for them. Thus multiple solutions for these problems were sought. Of the 387 respondents, the prevalence of psychological distress was 65.1%, where 60.2% had diagnosable current mental illness, and 16.3% had had one disorder in their lifetime. Over 80% of patients with psychosis used both biomedical and traditional healing systems. Those who combined these two systems seemed to have a better outcome. All the symptom scales showed a percentage reduction of more than 20% at the 3- and 6-month follow-ups. Conclusion : Traditional healers shoulder a large burden of care of patients with mental health problems. This calls for all those who share the goal of improving the mental health of individuals to engage with traditional healers
Participation bias assessment in three high-impact journals
Studies into participation bias have examined participation trends, where it occurs, the factors affecting it, and methods to try to reduce it. However, some authors only discuss participation bias at the end of the study, some acknowledge it and apply a method to try to reduce it, while others ignore it or dismiss it as negligible. Issues of three high-impact epidemiology journals were examined; 81 articles were read and reviewed for potential participation bias. Categories were used to classify the approach taken to participation bias and the results recorded. Of the 81 articles considered, 42 (51%) were eligible and could have suffered from participation bias. It was found that 57% of these articles ignored the effects of participation bias, while 17% only considered it briefly in the discussion. Few articles (22%) attempted to reduce the participation bias, with over half of these using unsuitable methods (55%). This review highlights how participation bias is often not considered and hence the conclusions drawn from these studies may not be correct
Classification of the Mediterranean lowland to submontane pine forest vegetation
Vegetation SurveyAim: Vegetation types of Mediterranean thermophilous pine forests dominated by
Pinus brutia, Pinus halepensis, Pinus pinaster and Pinus pinea were studied in various
areas. However, a comprehensive formal vegetation classification of these forests
based on a detailed data analysis has never been developed. Our aim is to provide
the first broad-scale classification of these pine forests based on a large data set of
vegetation plots.
Location: Southern Europe, North Africa, Levant, Anatolia, Crimea and the Caucasus.
Methods: We prepared a data set of European and Mediterranean pine forest vegetation
plots. We selected 7,277 plots dominated by the cold-sensitive Mediterranean
pine species Pinus brutia, Pinus halepensis, Pinus pinaster and Pinus pinea. We classified
these plots using TWINSPAN, interpreted the ecologically and biogeographically
homogeneous TWINSPAN clusters as alliances, and developed an expert system for
automatic vegetation classification at the class, order and alliance levels.
Results: We described Pinetea halepensis as a new class for the Mediterranean lowland
to submontane pine forests, included in the existing Pinetalia halepensis order,
and distinguished 12 alliances of native thermophilous pine forests, including four
newly described and three informal groups merging supposedly native stands and
old-established plantations. The main gradients in species composition reflect elevational
vegetation belts and the west–east, and partly north–south, biogeographical
differences. Both temperature and precipitation seasonality co-vary with these
gradients.
Conclusions: We provide the first formal classification at the order and alliance levels
for all the Mediterranean thermophilous pine forests based on vegetation-plot data.
This classification includes traditional syntaxa, which have been critically revised,
and a new class and four new alliances. We also outline a methodological workflow that might be useful for other vegetation classification syntheses. The expert system,
which is jointly based on pine dominance and species composition, is a tool for applying
this classification in research and nature conservation survey, monitoring and
managementinfo:eu-repo/semantics/publishedVersio
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