Improving Holographic Search Algorithms using Sorted Pixel Selection

Traditional search algorithms for computer hologram generation such as Direct Search and Simulated Annealing offer some of the best hologram qualities at convergence when compared to rival approaches. Their slow generation times and high processing power requirements mean, however, that they see little use in performance critical applications. This paper presents the novel Sorted Pixel Selection (SPS) modification for Holographic Search Algorithms (HSAs) that offers Mean Square Error (MSE) reductions in the range of 14:7 19:2% for the test images used. SPS operates by substituting a weighted search selection procedure for traditional random pixel selection processes. While small, the improvements seen are observed consistently across a wide range of test cases and require limited overhead for implementatio

Low flow controls on benthic and hyporheic macroinvertebrate assemblages during supra-seasonal drought

Despite the widely accepted importance of the hyporheic zone as a habitat for stream macroinvertebrates during floods, few data exist regarding community composition and distribution during periods of low flow or drought in perennial streamsi Integrating research on hyporheic invertebrates with results from a long-term study of a U K river provided the opportunity to examine how surface and hyporheic macroinvertebrate communities respond to inter-annual variability in river flow and periods of groundwater drought. Changes in the riverine macroinvertebrate community associated with low flow included a reduction in species richness and the number of individuals per sample, particularly aquatic insects. The hyporheic community was characterized by a relatively homogeneous composition during a period of severe low flow, punctuated by short-term changes associated with variation in water temperature rather than changes in discharge. We present a conceptual model of the processes influencing benthic and hyporheic invertebrates under low-flow conditions. Previous studies have seldom integrated these two assemblages and their interactions. The model presented highlights the potential importance of surface water and hyporheic zone linkages for riverine invertebrate communities under a range of flow conditions

Synergistic effect on cardiac energetics by targeting the creatine kinase system: in vivo application of high-resolution 31P-CMRS in the mouse

Background Phosphorus cardiovascular magnetic resonance spectroscopy (31P-CMRS) has emerged as an important tool for the preclinical assessment of myocardial energetics in vivo. However, the high rate and diminutive size of the mouse heart is a challenge, resulting in low resolution and poor signal-to-noise. Here we describe a refined high-resolution 31P-CMRS technique and apply it to a novel double transgenic mouse (dTg) with elevated myocardial creatine and creatine kinase (CK) activity. We hypothesised a synergistic effect to augment energetic status, evidenced by an increase in the ratio of phosphocreatine-to-adenosine-triphosphate (PCr/ATP). Methods and results Single transgenic Creatine Transporter overexpressing (CrT-OE, n = 7) and dTg mice (CrT-OE and CK, n = 6) mice were anaesthetised with isoflurane to acquire 31P-CMRS measurements of the left ventricle (LV) utilising a two-dimensional (2D), threefold under-sampled density-weighted chemical shift imaging (2D-CSI) sequence, which provided high-resolution data with nominal voxel size of 8.5 µl within 70 min. (1H-) cine-CMR data for cardiac function assessment were obtained in the same imaging session. Under a separate examination, mice received invasive haemodynamic assessment, after which tissue was collected for biochemical analysis. Myocardial creatine levels were elevated in all mouse hearts, but only dTg exhibited significantly elevated CK activity, resulting in a 51% higher PCr/ATP ratio in heart (3.01 ± 0.96 vs. 2.04 ± 0.57—mean ± SD; dTg vs. CrT-OE), that was absent from adjacent skeletal muscle. No significant differences were observed for any parameters of LV structure and function, confirming that augmentation of CK activity does not have unforeseen consequences for the heart. Conclusions We have developed an improved 31P-CMRS methodology for the in vivo assessment of energetics in the murine heart which enabled high-resolution imaging within acceptable scan times. Mice over-expressing both creatine and CK in the heart exhibited a synergistic elevation in PCr/ATP that can now be tested for therapeutic potential in models of chronic heart failure

Benthic and hyporheic invertebrate community responses to seasonal flow recession in a groundwater-dominated stream

Natural hydrological variability in lotic ecosystems can include prolonged periods of flow recession. A reduction in discharge is accompanied by abiotic changes in benthic and hyporheic habitats, often including reductions in s habitat availability. Whilst the benthic invertebrate community response to low flows is well documented, little research has considered how the composition of the community within the hyporheic zone is affected. We examined benthic and hyporheic invertebrate community composition during flow recession in a temperate karst stream, at sites with contrasting historic flow permanence regimes. Changes in the benthic invertebrate community composition primarily reflected changes in habitat availability associated with discharge variability; in particular, the population density of the dominant amphipod, Gammarus pulex, increased as the area of submerged benthic sediments declined. Concurrent significant increase in the hyporheic abundance of G. pulex, and moderate increase in the proportion of the total G. pulex population inhabiting the hyporheic zone were recorded. It is postulated that G. pulex migrated into the hyporheic zone to reduce exposure to intensifying biological interactions in the benthic sediments. Increase in the hyporheic abundance of G. pulex was particularly pronounced at sites with historic intermittent flow, which could be attributed to downwelling stream water dominating vertical hydrologic exchange. The increase in G. pulex abundance reduced community diversity in the benthic sediments, but had no apparent detrimental effects on the hyporheic invertebrate assemblages

Food insecurity in adults with severe mental illness living in Northern England: Peer research interview findings

Food insecurity means that a person does not have access to sufficient nutritiousfood for normal growth and health. Food insecurity can lead to many healthproblems such as obesity, heart disease, diabetes, and other long term healthconditions. People living with a severe mental illness are more likely to experiencefood insecurity than people without mental illness. Peer-ledin-depthinterviewswere conducted with adults with severe mental illness from Northern England,during which their experiences of food insecurity and strategies to tackle foodinsecurity were discussed. Interviews took place between March and December2022, with interviews being transcribed and analysed using deductive andinductive thematic analysis. Thirteen interviews were conducted, finding that foodinsecurity in adults with severe mental illness was often a long-standingissue.Unemployment, the cost-of-livingcrisis and fuel poverty impacted on experiencesof food insecurity. Difficulties accessing food banks such as transport, stigma,and the limited selection of available food was also discussed. Strategies to tacklefood insecurity centred on making food banks more accessible and improving thequality of available food. Future research should aim to eradicate food insecurityfor adults with severe mental illness, as limited research and action focuses onthis population group over and above ‘mental illness’ or ‘poor mental health’.Removing barriers to accessing food such as lack of transport, and providing foodwhich is of adequate nutritional quality, should be prioritised, as well as tacklingthe stigma and accessibility issues surrounding food banks use

Food insecurity in adults with severe mental illness living in Northern England: A co-produced cross-sectional study

This study aimed to explore food insecurity prevalence and experiences of adults with severe mental illness living in Northern England.MethodsThis mixed-methods cross-sectional study took place between March and October 2022. Participants were adults with self-reported severe mental illness living in Northern England. The survey included demographic, health, and financial questions. Food insecurity was measured using the US Department of Agriculture Adult Food Security measure. Quantitative data were analysed using descriptive statistics and binary logistic regression; and qualitative data using content analysis.ResultsIn total, 135 participants completed the survey, with a mean age of 44.7 years (SD: 14.1, range: 18–75 years). Participants were predominantly male (53.3%), white (88%) and from Yorkshire (50.4%). The food insecurity prevalence was 50.4% (n = 68). There was statistical significance in food insecurity status by region (p = 0.001); impacts of severe mental illness on activities of daily living (p = 0.02); and the Covid pandemic on food access (p < 0.001). The North West had the highest prevalence of food insecurity (73.3%); followed by the Humber and North East regions (66.7%); and Yorkshire (33.8%). In multivariable binary logistic regression, severe mental illness' impact on daily living was the only predictive variable for food insecurity (odds ratio = 4.618, 95% confidence interval: 1.071–19.924, p = 0.04).ConclusionThe prevalence of food insecurity in this study is higher than is reported in similar studies (41%). Mental health practitioners should routinely assess and monitor food insecurity in people living with severe mental illness. Further research should focus on food insecurity interventions in this population

Searching for z~7.7 Lyman Alpha Emitters in the COSMOS Field with NEWFIRM

The study of Ly-alpha emission in the high-redshift universe is a useful probe of the epoch of reionization, as the Ly-alpha line should be attenuated by the intergalactic medium (IGM) at low to moderate neutral hydrogen fractions. Here we present the results of a deep and wide imaging search for Ly-alpha emitters in the COSMOS field. We have used two ultra-narrowband filters (filter width of ~8-9 {\deg}A) on the NEWFIRM camera, installed on the Mayall 4m telescope at Kitt Peak National Observatory, in order to isolate Ly-alpha emitters at z = 7.7; such ultra-narrowband imaging searches have proved to be excellent at detecting Ly-alpha emitters. We found 5-sigma detections of four candidate Ly-alpha emitters in a survey volume of 2.8 x 10^4 Mpc^3 (total survey area ~760 arcmin^2). Each candidate has a line flux greater than 8 x 10^-18 erg s^-1 cm^-2. Using these results to construct a luminosity function and comparing to previously established Ly-alpha luminosity functions at z = 5.7 and z = 6.5, we find no conclusive evidence for evolution of the luminosity function between z = 5.7 and z = 7.7. Statistical Monte Carlo simulations suggest that half of these candidates are real z = 7.7 targets, and spectroscopic follow-up will be required to verify the redshift of these candidates. However, our results are consistent with no strong evolution in the neutral hydrogen fraction of the IGM between z = 5.7 and z = 7.7, even if only one or two of the z = 7.7 candidates are spectroscopically confirmed.Comment: 29 pages, 5 figures, accepted to ApJ (12/11

Relating Coral Skeletal Structures at Different Length Scales to Growth, Light Availability to Symbiodinium, and Thermal Bleaching

Light scattering of coral skeletons and tissues increases light availability to photosynthetic endosymbionts to form one of the most efficient biological collectors of solar radiation. Rapid increases in light availability during thermally-induced symbiont loss (bleaching) impair photosynthetic performance of the remaining Symbiodinium and precipitate a more severe bleaching response (optical feedback-loop hypothesis). Here we focus on light scattering of the skeleton, which is determined by light interaction with skeletal components assembled in a hierarchical fractal-like structure from tens of nanometers (e.g., calcium carbonate nanograins) to micro- and milli-meters (septa, corallites, and coenosteum) to centimeters and higher (colony form). We examined the association between skeletal structures, their role in light scattering, and species-specific bleaching responses for 88 coral species using phylogenetically-corrected analysis. We also explored the effect of growth on light scattering by modeling the fractal-like accretive growth of the skeleton (assuming a diffusion limited process of biomineralization) as a function of skeletal density, size of nanograins, fractal range of biomineralized clusters, and overall mass-fractal dimension, and validated the model with experimental data. Our results show that differences in light scattering from the top ~200 μm (micro-μs′) of the skeleton, and not from the whole skeleton (bulk-μs′), are related to bleaching susceptibility. We also demonstrate how differences in micro-μs′ of corallites and coenosteum could explain, in part, the heterogeneous light environment between polyp and coenosarc. The average effective light transport distance of coenosteum measured in 14 coral species indicates that coenosteum could transport light to the corallites, which could then function as “light-trapping devices” where photons are scattered multiple times by septa and corallite walls until absorbed by Symbiodinium. Furthermore, our fractal skeletal growth model suggests that corals that grow faster typically have lower mass-fractal dimension, denser skeletons, lower skeletal micro-μs′, and higher bleaching susceptibility. Finally, our results demonstrate that several skeletal structures of varying length scales known to modulate the light microenvironment of Symbiodinium in coral tissue are not associated with bleaching susceptibility. This work provides evidence of the relationship between skeletal growth, light scattering, and bleaching, and further supports the optical feedback-loop hypothesis of coral bleaching