95 research outputs found
Characterization of the c-specific promoter of the gene encoding human endothelin-converting enzyme-1 (ECE-1)
AbstractHuman ECE-1 is expressed in four isoforms with different tissue distribution and its mRNA and protein levels are altered under certain pathophysiological conditions. To investigate the transcriptional regulation of ECE-1, we studied the regulatory region of ECE-1c, the major ECE-1 isoform. A genomic clone comprising the complete human ECE-1 gene including the putative ECE-1c-specific promoter was obtained. Up to 968 bp upstream of the putative c-specific translation initiation start codon and several serial deletion mutants were subcloned into a reporter vector and transfected into endothelial (BAEC, EA.hy926, ECV304) and epithelial (MDA MB435S, MCF7) cells, showing very strong promoter activity in comparison to the SV40 promoter and to the previously described ECE-1a and 1b promoters. Transfection of serial deletion mutants indicated two positive regulatory regions within the promoter (−142/−240 and −240/490) likely involved in binding GATA and ETS transcription factors. RNase protection assay (RPA) and 5′-RACE revealed multiple transcriptional start sites located at about −110, −140 and −350 bp. Site-directed mutagenesis demonstrated a crucial role for the E2F cis-element for basal ECE-1c promoter activity. Additionally, we found a correlation between isoform-specific ECE-1 mRNA levels and corresponding ECE-1a, 1b, 1c promoter activities
is-rSNP: a novel technique for in silico regulatory SNP detection
Motivation: Determining the functional impact of non-coding disease-associated single nucleotide polymorphisms (SNPs) identified by genome-wide association studies (GWAS) is challenging. Many of these SNPs are likely to be regulatory SNPs (rSNPs): variations which affect the ability of a transcription factor (TF) to bind to DNA. However, experimental procedures for identifying rSNPs are expensive and labour intensive. Therefore, in silico methods are required for rSNP prediction. By scoring two alleles with a TF position weight matrix (PWM), it can be determined which SNPs are likely rSNPs. However, predictions in this manner are noisy and no method exists that determines the statistical significance of a nucleotide variation on a PWM score
Development of a GEM-TPC prototype
The use of GEM foils for the amplification stage of a TPC instead of a con-
ventional MWPC allows one to bypass the necessity of gating, as the backdrift
is suppressed thanks to the asymmetric field configuration. This way, a novel
continuously running TPC, which represents one option for the PANDA central
tracker, can be realized. A medium sized prototype with a diameter of 300 mm
and a length of 600 mm will be tested inside the FOPI spectrometer at GSI using
a carbon or lithium beam at intermediate energies (E = 1-3AGeV). This detector
test under realistic experimental conditions should allow us to verify the
spatial resolution for single tracks and the reconstruction capability for
displaced vertexes. A series of physics measurement implying pion beams is
scheduled with the FOPI spectrometer together with the GEM-TPC as well.Comment: 5 pages, 4 figures, Proceedings for 11th ICATTP conference in como
(italy
Poly(ADP-ribose) polymerase-1 (PARP-1) transcriptionally regulates angiotensin AT2 receptor (AT2R) and AT2R binding protein (ATBP) genes
Experimental constraints on the -nucleus real potential
In a search for mesic states, the production of -mesons in
coincidence with forward going protons has been studied in photon induced
reactions on C for incident photon energies of 1250 - 3100 MeV. The
pairs from decays of bound or quasi-free -mesons have
been measured with the CBELSA/TAPS detector system in coincidence with protons
registered in the MiniTAPS forward array. Structures in the total energy
distribution of the pairs, which would indicate the population
and decay of bound B states, are not observed. The
cross section of 0.3 nb/MeV/sr observed in the bound state energy regime
between -100 and 0 MeV may be accounted for by yield leaking into the bound
state regime because of the large in-medium width of the -meson. A
comparison of the measured total energy distribution with calculations suggests
the real part of the B potential to be small and only
weakly attractive with 35(stat) 20(syst) MeV
in contrast to some theoretical predictions of attractive potentials with a
depth of 100 - 150 MeV.Comment: 13 pages, 8 figure
The {\eta}'-carbon potential at low meson momenta
The production of mesons in coincidence with forward-going
protons has been studied in photon-induced reactions on C and on a
liquid hydrogen (LH) target for incoming photon energies of 1.3-2.6 GeV at
the electron accelerator ELSA. The mesons have been identified
via the decay
registered with the CBELSA/TAPS detector system. Coincident protons have been
identified in the MiniTAPS BaF array at polar angles of . Under these kinematic constraints the
mesons are produced with relatively low kinetic energy (
150 MeV) since the coincident protons take over most of the momentum of the
incident-photon beam. For the C-target this allows the determination of the
real part of the -carbon potential at low meson momenta by
comparing with collision model calculations of the kinetic energy
distribution and excitation function. Fitting the latter data for
mesons going backwards in the center-of-mass system yields a potential depth of
V = (44 16(stat)15(syst)) MeV, consistent with earlier
determinations of the potential depth in inclusive measurements for average
momenta of 1.1 GeV/. Within the experimental
uncertainties, there is no indication of a momentum dependence of the
-carbon potential. The LH data, taken as a reference to check
the data analysis and the model calculations, provide differential and integral
cross sections in good agreement with previous results for
photoproduction off the free proton.Comment: 9 pages, 13 figures. arXiv admin note: text overlap with
arXiv:1608.0607
First measurement of the helicity asymmetry for in the resonance region
The first measurement of the helicity dependence of the photoproduction cross
section of single neutral pions off protons is reported for photon energies
from 600 to 2300\,MeV, covering nearly the full solid angle. The data are
compared to predictions from the SAID, MAID, and BnGa partial wave analyses.
Strikingly large differences between data and predictions are observed which
are traced to differences in the helicity amplitudes of well known and
established resonances. Precise values for the helicity amplitudes of several
resonances are reported
Photoproduction of eta mesons from the neutron: cross sections and double polarization observable E
Photoproduction of mesons from neutrons} \abstract{Results from
measurements of the photoproduction of mesons from quasifree protons and
neutrons are summarized. The experiments were performed with the CBELSA/TAPS
detector at the electron accelerator ELSA in Bonn using the
decay. A liquid deuterium target was used for the
measurement of total cross sections and angular distributions. The results
confirm earlier measurements from Bonn and the MAMI facility in Mainz about the
existence of a narrow structure in the excitation function of . The current angular distributions show a forward-backward
asymmetry, which was previously not seen, but was predicted by model
calculations including an additional narrow state. Furthermore, data
obtained with a longitudinally polarized, deuterated butanol target and a
circularly polarized photon beam were analyzed to determine the double
polarization observable . Both data sets together were also used to extract
the helicity dependent cross sections and . The
narrow structure in the excitation function of
appears associated with the helicity-1/2 component of the reaction
The polarization observables T, P, and H and their impact on multipoles
Data on the polarization observables T, P, and H for the reaction are reported. Compared to earlier data from other experiments, our
data are more precise and extend the covered range in energy and angle
substantially. The results were extracted from azimuthal asymmetries measured
using a transversely polarized target and linearly polarized photons. The data
were taken at the Bonn electron stretcher accelerator ELSA with the CBELSA/TAPS
detector. Within the Bonn-Gatchina partial wave analysis, the new polarization
data lead to a significant narrowing of the error band for the multipoles for
neutral-pion photoproduction
The N(1520) 3/2- helicity amplitudes from an energy-independent multipole analysis based on new polarization data on photoproduction of neutral pions
New data on the polarization observables T, P, and H for the reaction are reported. The results are extracted from azimuthal
asymmetries when a transversely polarized butanol target and a linearly
polarized photon beam are used. The data were taken at the Bonn electron
stretcher accelerator ELSA using the CBELSA/TAPS detector. These and earlier
data are used to perform a truncated energy-independent partial wave analysis
in sliced-energy bins. This energy-independent analysis is compared to the
results from energy-dependent partial wave analyses
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