354 research outputs found
Saline springs and ophites outcrops: geoarchaeological evidences in the Prehistory of the inland of Cadiz
Gran parte de la provincia de Cádiz posee importantes afloramientos de aguas salobres relacionadas con las formaciones geológicas del Triásico en su facies Keuper. Las explotaciones salineras aparecen asociadas a asentamientos de poblaciones prehistóricas e históricas. En varios de sus entornos se documentan ofitas que fueron la base para la fabricación de útiles pulimentados de épocas prehistóricasMuch of the province of Cadiz has important brackish water springs related to the geological formations of the Triassic Keuper phase. The salt pands and settlements are associated with prehistoric and historical villages. In several of these environments there are recorded ophites that were the basis for manufacturing of prehistoric polished items
Drying niches of aquatic macroinvertebrates identify potential biomonitoring indicators in intermittent and ephemeral streams
Intermittent rivers and ephemeral streams (IRES) compose the majority of draining networks on Earth, supporting a unique fraction of biodiversity. Despite their high ecological value, IRES are increasingly threatened by global change and require appropriate biomonitoring and restoration tools. However, indices and indicators used in routine biomonitoring programs are often confounded by drying effects. This occurs because most pollutionsensitive taxa are lost over drying gradients, limiting the utility of current biomonitoring tools in IRES. To address this challenge, there is a need to evaluate which taxa should be used to calculate biomonitoring metrics and indicators over the different portions of the drying gradient. Here, using high-resolution drying data from 33 unpolluted streams, we explored the drying preferences of macroinvertebrates to identify their potential as biomonitoring indicators in IRES. To do this, we characterized macroinvertebrate drying niches and identified those with drying resistance and sensitivity preferences. Next, we evaluated the capacity of functional traits to predict drying specialization and affinity. Finally, to identify potential biomonitoring metrics and indicators for IRES, we evaluated how drying influenced the density, relative abundance and richness of taxa in drying sensitive and drying-resistant niches. Our results identified three macroinvertebrate groups with drying resistant niches (partly tolerant, generalist and specialist taxa) and one group of drying-sensitive taxa. We also found that functional traits had a limited capacity to represent differences in drying niches, with shredding trophic preferences and body size showing the strongest correlations. In addition, we observed that the density, relative abundance and richness of drying-resistant taxa were less influenced by drying intensity than those of drying-sensitive taxa. Finally, we found that some pollution-sensitive taxa with partial (e.g., Lepidostoma), moderate (e.g., Corduliidae) or high drying tolerance (e.g., Nemoura) can serve as potential indicators in IRES. Taken together, our results demonstrate that characterizing drying niches can be a useful strategy for developing biomonitoring tools in IRES and for highlighting the limitations of taxonomic and trait-based approaches
Eczema de contacto alérgico y profesional en una consulta dermatológica. Mallorca, 1996-2001
Presentamos el estudio descriptivo de una serie de pacientes afectos de dermatitis o eczema, usualmente del tipo alérgico de contacto, confirmado mediante las pruebas epicutáneas correspondientes (patchtest) realizadas entre enero de 1996 y marzo de 2001 en nuestras consultas dermatológicas. De 190 tests alérgicos practicados a 121 mujeres y 69 varones, 133 resultaron positivos; los restantes (57) fueron negativos por tratarse de dermatitis no alérgicas o ser de causa desconocida. La mayor parte de los pacientes contaban entre 20 y 49 años de edad. Las reacciones alérgicas más frecuentes fueron, por orden de frecuencia, al cobalto, al níquel y al cromo. Analizamos, además, los aspectos de interés médico del resto de alérgenos
Multiple drying aspects shape dissolved organic matter composition in intermittent streams
Water availability is a fundamental driver of biogeochemical processing in highly dynamic ecosystems such as intermittent rivers and ephemeral streams (IRES), which are recognized as the most common fluvial ecosystem globally. Because of their global extent, IRES have a remarkable contribution to organic matter processing, which is expected to intensify as climate change and water extraction expand IRES extension. Nevertheless, the effect of the complexity of the drying process on river biogeochemistry remains unclear. This study investigated how drying aspects affect the dissolved organic carbon (DOC) concentration and composition in 35 streams along a wide flow-intermittence gradient in the NE Iberian Peninsula. To do that, four drying aspects: annual drying duration, annual frequency, duration of the last drying event, and time since the last drying event were characterized. Results showed that DOC concentration and the contribution of humic-like compounds were positively associated with intensifying drying conditions. In addition, protein-like compounds decreased over the drying gradient. More specifically, changes in DOC concentration were driven mainly by annual drying duration, whereas annual drying frequency and the duration of the last drying event jointly explained dissolved organic matter composition. These results suggest that the quantity and composition of dissolved organic matter in streams respond differently to the temporal aspects of the drying process. Our study can help to better anticipate changes in organic matter in the context of climate change
Remote sensing depicts riparian vegetation responses to water stress in a humid Atlantic region
Riparian areas in the Cantabrian Atlantic ecoregion (northwest Portugal) play a key role in soil formation and conservation, regulation of nutrient and water cycle, creation of landscape aesthetic value and the preservation of biodiversity. The maintenance of their ecological integrity is crucial given the ever increase in multiple anthropogenic (water demand and agriculture) and climatic pressures (droughts and extreme events). We developed a transferable remote sensing approach, taking advantage of the latest freely available technologies (Sentinel-2 and Copernicus Land products), to detect intra-annual and inter-annual changes in riparian vegetation productivity at the river basin scale related to water stress. This study has used the normalized difference vegetation index (NDVI) to investigate riparian vegetation productivity dynamics on three different vegetation types (coniferous, broadleaved and grassland) over the past 5 years (2015-2019). Our results indicated that inter-annual seasonality differed between drier (2017) and wetter (2016) years. We found that intra-annual dynamics of NDVI were influenced by the longitudinal river zonation. Our model ranked first (r2m = 0.73) showed that the productivity of riparian vegetation during the dry season was positively influenced by annual rainfall and by the type of riparian vegetation. The emergent long lags between climatic variation and riparian plant productivity provides opportunities to forecast early warnings of climatically-driven impacts. In addition, the different average productivity levels among vegetation types should be considered when assessing climatic impacts on riparian vegetation. Future applications of Sentinel 2 products could seek to distinguish riparian areas that are likely to be more vulnerable to changes in the annual water balance from those that are more resistant under longer-term changes in climate.Contrato-Programa UIDB/04050/2020. ERA4CS/0004/2016. CLIMALERT: Climate Alert Smart System for Sustainable Water and Agriculture, an ERA-NET initiated by JPI Climate (ERA4CS programme) co-funded by the EU commission (Grant Agreement 690462) and FCT (ERA4CS/0004/2016). This work was supported by the “Contrato-Programa” UIDB/04050/2020 funded by national funds through the FCT I.P. (GP
Non-interactive effects drive multiple stressor impacts on the taxonomic and functional diversity of atlantic stream macroinvertebrates
Freshwaters are considered among the most endangered ecosystems globally due to multiple stressors, which coincide in time and space. These local stressors typically result from land-use intensification or hydroclimatic alterations, among others. Despite recent advances on multiple stressor effects, current knowledge is still limited to manipulative approaches minimizing biological and abiotic variability. Thus, the assessment of multiple stressor effects in real-world ecosystems is required. Using an extensive survey of 50 stream reaches across North Portugal, we evaluated taxonomic and functional macroinvertebrate responses to multiple stressors, including marked gradients of nutrient enrichment, flow reduction, riparian vegetation structure, thermal stress and dissolved oxygen depletion. We analyzed multiple stressor effects on two taxonomic (taxon richness, Shannon-diversity) and two trait-based diversity indices (functional richness, functional dispersion), as well as changes in trait composition. We found that multiple stressors had additive effects on all diversity metrics, with nutrient enrichment identified as the most important stressor in three out of four metrics, followed by dissolved oxygen depletion and thermal stress. Taxon richness, Shannon-diversity and functional richness responded similarly, whereas functional dispersion was driven by changes in flow velocity and thermal stress. Functional trait composition changed along a major stress gradient determined by nutrient enrichment and oxygen depletion, which was positively correlated with organisms possessing fast-living strategies, aerial respiration, adult phases, and gathering-collector feeding habits. Overall, our results reinforce the need to consider complementary facets of biodiversity to better identify assembly processes in response to multiple stressors. Our data suggest that stressor interactions may be less frequent in real-word streams than predicted by manipulative experiments, which can facilitate mitigation strategies. By combining an extensive field survey with an integrative consideration of multiple biodiversity facets, our study provides new insights that can help to better assess and manage rivers in a global change context.This work was supported by the project STREAMECO: Biodiversity and ecosystem functioning under climate change: from the gene to the stream (PTDC/CTA-AMB/31245/2017), funded by the Portuguese Foundation for Science and Technology (FCT) and the European Regional Development Fund (ERDF) through the COMPETE2020—Programa Operacional Competitividade e Internacionalização (POCI). This work was also supported by the River2Ocean project (NORTE-01-0145- FEDER-000068), co-financed by the European Regional Development Fund (ERDF), through Programa Operacional Regional do Norte (NORTE2020); by CCDR-N (Norte Portugal Regional Coordination and Development Commission) and European Funds (FEDER/POCI/COMPETE2020) through the project AgriFoodXXI (NORTE-01-0145-FEDER-000041); and by the “ContratoPrograma” UIDB/04050/2020 funded by national funds through the FCT I.P., the Centre of Molecular and Environmental Biology (CBMA). This work had the support of national funds through Portuguese Foundation for Science and Technology (FCT), under the project LA/P/0069/ 2020 granted to the Associate Laboratory ARNET. CG-C was funded by ”la Caixa” Foundation (ID 100010434), by means of a Junior Leader Fellowship contract (LCF/BQ/PR22/11920005)
Genome sequencing of evolved aspergilli populations reveals robust genomes, transversions in A. flavus, and sexual aberrancy in non-homologous end-joining mutants
BACKGROUND:
Aspergillus spp. comprises a very diverse group of lower eukaryotes with a high relevance for industrial applications and clinical implications. These multinucleate species are often cultured for many generations in the laboratory, which can unknowingly propagate hidden genetic mutations. To assess the likelihood of such events, we studied the genome stability of aspergilli by using a combination of mutation accumulation (MA) lines and whole genome sequencing.
RESULTS:
We sequenced the whole genomes of 30 asexual and 10 sexual MA lines of three Aspergillus species (A. flavus, A. fumigatus and A. nidulans) and estimated that each MA line accumulated mutations for over 4000 mitoses during asexual cycles. We estimated mutation rates of 4.2 × 10-11 (A. flavus), 1.1 × 10-11 (A. fumigatus) and 4.1 × 10-11 (A. nidulans) per site per mitosis, suggesting that the genomes are very robust. Unexpectedly, we found a very high rate of GC → TA transversions only in A. flavus. In parallel, 30 asexual lines of the non-homologous end-joining (NHEJ) mutants of the three species were also allowed to accumulate mutations for the same number of mitoses. Sequencing of these NHEJ MA lines gave an estimated mutation rate of 5.1 × 10-11 (A. flavus), 2.2 × 10-11 (A. fumigatus) and 4.5 × 10-11 (A. nidulans) per base per mitosis, which is slightly higher than in the wild-type strains and some ~ 5-6 times lower than in the yeasts. Additionally, in A. nidulans, we found a NHEJ-dependent interference of the sexual cycle that is independent of the accumulation of mutations.
CONCLUSIONS:
We present for the first time direct counts of the mutation rate of filamentous fungal species and find that Aspergillus genomes are very robust. Deletion of the NHEJ machinery results in a slight increase in the mutation rate, but at a rate we suggest is still safe to use for biotechnology purposes. Unexpectedly, we found GC→TA transversions predominated only in the species A. flavus, which could be generated by the hepatocarcinogen secondary metabolite aflatoxin. Lastly, a strong effect of the NHEJ mutation in self-crossing was observed and an increase in the mutations of the asexual lines was quantifiedEspaña, MINECO grant number BIO2015-6714
Evolution of asexual and sexual reproduction in the aspergilli
Aspergillus nidulans has long-been used as a model organism to gain insights into the genetic basis of asexual and sexual developmental processes both in
other members of the genus Aspergillus, and filamentous fungi in general. Paradigms have been established concerning the regulatory mechanisms of conidial
development. However, recent studies have shown considerable genome divergence in the fungal kingdom, questioning the general applicability of findings from
Aspergillus, and certain longstanding evolutionary theories have been questioned. The phylogenetic distribution of key regulatory elements of asexual reproduction in
A. nidulans was investigated in a broad taxonomic range of fungi. This revealed that some proteins were well conserved in the Pezizomycotina (e.g. AbaA, FlbA, FluG,
NsdD, MedA, and some velvet proteins), suggesting similar developmental roles. However, other elements (e.g. BrlA) had a more restricted distribution solely in the
Eurotiomycetes, and it appears that the genetic control of sporulation seems to be more complex in the aspergilli than in some other taxonomic groups of the
Pezizomycotina. The evolution of the velvet protein family is discussed based on the history of expansion and contraction events in the early divergent fungi. Heterologous expression of the A. nidulans abaA gene in Monascus ruber failed to induce development of complete conidiophores as seen in the aspergilli, but did result in
increased conidial production. The absence of many components of the asexual developmental pathway from members of the Saccharomycotina supports the hypothesis
that differences in the complexity of their spore formation is due in part to the increased diversity of the sporulation machinery evident in the Pezizomycotina. Investigations were also made into the evolution of sex and sexuality in the aspergilli. MAT loci were identified from the heterothallic Aspergillus (Emericella) heterothallicus
and Aspergillus (Neosartorya) fennelliae and the homothallic Aspergillus pseudoglaucus (=Eurotium repens). A consistent architecture of the MAT locus was seen in
these and other heterothallic aspergilli whereas much variation was seen in the arrangement of MAT loci in homothallic aspergilli. This suggested that it is most likely that
the common ancestor of the aspergilli exhibited a heterothallic breeding system. Finally, the supposed prevalence of asexuality in the aspergilli was examined. Investigations were made using A. clavatus as a representative ‘asexual’ species. It was possible to induce a sexual cycle in A. clavatus given the correct MAT1-1 and
MAT1-2 partners and environmental conditions, with recombination confirmed utilising molecular markers. This indicated that sexual reproduction might be possible in
many supposedly asexual aspergilli and beyond, providing general insights into the nature of asexuality in fungi.National Natural Science Foundation of China 31601446National Research Foundation of Korea 2016010945Intelligent Synthetic Biology Center of Global Frontier Projects 2015M3A6A8065838Biotechnology and Biological Sciences Research CouncilGovernment of IraqMinisterio de Economía y Competitividad BIO2015-67148-
Similarity in the difference: changes in community functional features along natural and anthropogenic stress gradients.
The effect of stressors on biodiversity can vary in relation to the degree to which biological communities have adapted over evolutionary time. We compared the responses of functional features of stream insect communities along chronic stress gradients with contrasting time persistence. Water salinity and land use intensification were used as examples of natural (long-term persistent) and anthropogenic (short-term persistent) stressors, respectively. A new trait-based approach was applied to quantify functional diversity components and functional redundancy within the same multidimensional space, using metrics at the taxon and community levels. We found similar functional responses along natural and anthropogenic stress gradients. In both cases, the mean taxon functional richness and functional similarity between taxa increased with stress, whereas community functional richness and functional redundancy decreased. Despite the differences in evolutionary persistence, both chronic stressors act as strong nonrandom environmental filters, producing convergent functional responses. These results can improve our ability to predict functional effects of novel stressors at ecological and evolutionary scales
Diversity mediates the responses of invertebrate density to duration and frequency of rivers annual drying regime
Predicting the impacts of global change on highly dynamic ecosystems requires a better understanding of how communities respond to disturbance duration, frequency and timing. Intermittent rivers and ephemeral streams are dynamic ecosystems that are recognized as the most common fluvial ecosystem globally. The complexity of the drying process can give rise to different annual and antecedent hydrological conditions, but their effect on aquatic communities remains unclear. Here, using aquatic invertebrates from 33 streams across a flow-intermittence gradient, we assessed how annual (drying duration and frequency) and recent drying characteristics (duration of the last dry period and flowing duration since the last rewetting) affect the density and diversity metrics of communities and trophic groups while controlling for other key abiotic factors (dissolved oxygen and altitude). We characterized invertebrate communities using taxonomy and functional traits to capture biological features that increase vulnerability to drying. In addition, using structural equation modelling (SEM), we evaluated pathways by which drying characteristics directly impact invertebrate density and whether diversity indirectly mediates such relationships. We show that drying frequency drove reductions in diversity at the community level and within trophic groups, whereas both the drying duration and frequency had a negative influence on density metrics. Reductions in taxonomic richness were linked to increased annual drying duration, whereas functional diversity declined in response to annual drying frequency. Filterer, predator and shredder trophic groups exhibited the strongest negative responses to drying. Recent drying characteristics had a minor effect on density and diversity metrics. Our SEM results demonstrated that diversity mediates the negative impacts of annual drying duration and frequency on invertebrate density through reductions in their taxonomic richness and functional diversity. Our results underscore the importance of considering multiple drying characteristics together with the interdependence of density and diversity to better anticipate drying responses in freshwater ecosystems. Keywords: biodiversity-ecosystem functioning, drying, flow intermittence, functional traits, intermittent rivers and ephemeral streams, Mediterranean stream
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