The logic of recurrent circuits in the primary visual cortex

Recurrent cortical activity sculpts visual perception by refining, amplifying or suppressing visual input. However, the rules that govern the influence of recurrent activity remain enigmatic. We used ensemble-specific two-photon optogenetics in the mouse visual cortex to isolate the impact of recurrent activity from external visual input. We found that the spatial arrangement and the visual feature preference of the stimulated ensemble and the neighboring neurons jointly determine the net effect of recurrent activity. Photoactivation of these ensembles drives suppression in all cells beyond 30 µm but uniformly drives activation in closer similarly tuned cells. In nonsimilarly tuned cells, compact, cotuned ensembles drive net suppression, while diffuse, cotuned ensembles drive activation. Computational modeling suggests that highly local recurrent excitatory connectivity and selective convergence onto inhibitory neurons explain these effects. Our findings reveal a straightforward logic in which space and feature preference of cortical ensembles determine their impact on local recurrent activity

Selenoprotein gene nomenclature

The human genome contains 25 genes coding for selenocysteine-containing proteins (selenoproteins). These proteins are involved in a variety of functions, most notably redox homeostasis. Selenoprotein enzymes with known functions are designated according to these functions: TXNRD1, TXNRD2, and TXNRD3 (thioredoxin reductases), GPX1, GPX2, GPX3, GPX4 and GPX6 (glutathione peroxidases), DIO1, DIO2, and DIO3 (iodothyronine deiodinases), MSRB1 (methionine-R-sulfoxide reductase 1) and SEPHS2 (selenophosphate synthetase 2). Selenoproteins without known functions have traditionally been denoted by SEL or SEP symbols. However, these symbols are sometimes ambiguous and conflict with the approved nomenclature for several other genes. Therefore, there is a need to implement a rational and coherent nomenclature system for selenoprotein-encoding genes. Our solution is to use the root symbol SELENO followed by a letter. This nomenclature applies to SELENOF (selenoprotein F, the 15 kDa selenoprotein, SEP15), SELENOH (selenoprotein H, SELH, C11orf31), SELENOI (selenoprotein I, SELI, EPT1), SELENOK (selenoprotein K, SELK), SELENOM (selenoprotein M, SELM), SELENON (selenoprotein N, SEPN1, SELN), SELENOO (selenoprotein O, SELO), SELENOP (selenoprotein P, SeP, SEPP1, SELP), SELENOS (selenoprotein S, SELS, SEPS1, VIMP), SELENOT (selenoprotein T, SELT), SELENOV (selenoprotein V, SELV) and SELENOW (selenoprotein W, SELW, SEPW1). This system, approved by the HUGO Gene Nomenclature Committee, also resolves conflicting, missing and ambiguous designations for selenoprotein genes and is applicable to selenoproteins across vertebrates

Pervasive Eclogitization Due to Brittle Deformation and Rehydration of Subducted Basement: Effects on Continental Recycling?

The buoyancy of continental crust opposes its subduction to mantle depths, except where mineral reactions substantially increase rock density. Sluggish kinetics limit such densification, especially in dry rocks, unless deformation and hydrous fluids intervene. Here we document how hydrous fluids in the subduction channel invaded lower crustal granulites at 50–60 km depth through a dense network of probably seismically induced fractures. We combine analyses of textures and mineral composition with thermodynamic modeling to reconstruct repeated stages of interaction, with pulses of high‐pressure (HP) fluid at 650–670°C, rehydrating the initially dry rocks to micaschists. SIMS oxygen isotopic data of quartz indicate fluids of crustal composition. HP growth rims in allanite and zircon show uniform U‐Th‐Pb ages of ∼65 Ma and indicate that hydration occurred during subduction, at eclogite facies conditions. Based on this case study in the Sesia Zone (Western Italian Alps), we conclude that continental crust, and in particular deep basement fragments, during subduction can behave as substantial fluid sinks, not sources. Density modeling indicates a bifurcation in continental recycling: Chiefly mafic crust, once it is eclogitized to >60%, are prone to end up in a subduction graveyard, such as is tomographically evident beneath the Alps at ∼550 km depth. By contrast, dominantly felsic HP fragments and mafic granulites remain positively buoyant and tend be incorporated into an orogen and be exhumed with it. Felsic and intermediate lithotypes remain positively buoyant even where deformation and fluid percolation allowed them to equilibrate at HP

Physiological Correlates of Volunteering

We review research on physiological correlates of volunteering, a neglected but promising research field. Some of these correlates seem to be causal factors influencing volunteering. Volunteers tend to have better physical health, both self-reported and expert-assessed, better mental health, and perform better on cognitive tasks. Research thus far has rarely examined neurological, neurochemical, hormonal, and genetic correlates of volunteering to any significant extent, especially controlling for other factors as potential confounds. Evolutionary theory and behavioral genetic research suggest the importance of such physiological factors in humans. Basically, many aspects of social relationships and social activities have effects on health (e.g., Newman and Roberts 2013; Uchino 2004), as the widely used biopsychosocial (BPS) model suggests (Institute of Medicine 2001). Studies of formal volunteering (FV), charitable giving, and altruistic behavior suggest that physiological characteristics are related to volunteering, including specific genes (such as oxytocin receptor [OXTR] genes, Arginine vasopressin receptor [AVPR] genes, dopamine D4 receptor [DRD4] genes, and 5-HTTLPR). We recommend that future research on physiological factors be extended to non-Western populations, focusing specifically on volunteering, and differentiating between different forms and types of volunteering and civic participation

Investigating the ability of astrocytes to drive neural network synchrony

Recent experimental works have implicated astrocytes as a significant cell type underlying several neuronal processes in the mammalian brain, from encoding sensory information to neurological disorders. Despite this progress, it is still unclear how astrocytes are communicating with and driving their neuronal neighbors. While previous computational modeling works have helped propose mechanisms responsible for driving these interactions, they have primarily focused on interactions at the synaptic level, with microscale models of calcium dynamics and neurotransmitter diffusion. Since it is computationally infeasible to include the intricate microscale details in a network-scale model, little computational work has been done to understand how astrocytes may be influencing spiking patterns and synchronization of large networks. We overcome this issue by first developing an “effective” astrocyte that can be easily implemented to already established network frameworks. We do this by showing that the astrocyte proximity to a synapse makes synaptic transmission faster, weaker, and less reliable. Thus, our “effective” astrocytes can be incorporated by considering heterogeneous synaptic time constants, which are parametrized only by the degree of astrocytic proximity at that synapse. We then apply our framework to large networks of exponential integrate-and-fire neurons with various spatial structures. Depending on key parameters, such as the number of synapses ensheathed and the strength of this ensheathment, we show that astrocytes can push the network to a synchronous state and exhibit spatially correlated patterns

Classification with Asymmetric Label Noise: Consistency and Maximal Denoising

International audienceIn many real-world classification problems, the labels of training examples are randomly corrupted. Thus, the set of training examples for each class is contaminated by examples of the other class. Previous theoretical work on this problem assumes that the two classes are separable, that the label noise is independent of the true class label, or that the noise proportions for each class are known. We introduce a general framework for classification with label noise that eliminates these assumptions. Instead, we give assumptions ensuring identifiability and the existence of a consistent estimator of the optimal risk, with associated estimation strategies. For any arbitrary pair of contaminated distributions, there is a unique pair of non-contaminated distributions satisfying the proposed assumptions, and we argue that this solution corresponds in a certain sense to maximal denoising. In particular, we find that learning in the presence of label noise is possible even when the class-conditional distributions overlap and the label noise is not symmetric. A key to our approach is a universally consistent estimator of the maximal proportion of one distribution that is present in another, a problem we refer to as "mixture proportion estimation." This work is motivated by a problem in nuclear particle classification